ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584303 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◣ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
IPO13
MAPKAPK5
NME6
POLR3F
DZANK1
CACTIN
SUDS3
PSMG2
CEP76
NUP85
VDAC2
EFTUD2
CCDC103
GRSF1
HSPA9
NVL
DYNC1LI2
SP5
POLR2E
C19orf48
RPL21
PMAIP1
ATP5MG
REXO1
STAM
STAM2
TBCK
AIMP1
TSN
VTI1B
GOSR2
NUP205
MRPS7
GGA3
EXOSC5
BCKDHA
CAPRIN1
DCTN1
SEC61B
NDUFA4
BLCAP
PES1
PAK1IP1
C6orf52
UPF2
PNO1
IRGQ
ZNF576
NCLN
SKP1
NEUROG2
FARSB
SLC35B1
RBBP5
ACTR10
TSNAX
DPH6
GOLGA5
SRD5A1
NSUN2
SELENOF
HS2ST1
HADHB
HADHA
UBE2I
LYRM4
FARS2
TMED1
RPS12
PROSER1
NHLRC3
RBKS
BABAM2
TTC8
VARS1
ICE1
PSMD12
PCBP1
MRPL11
RPS23
ATP6AP1L
SMC2
MRPS5
SPECC1
USP1
COX7A2L
ANAPC7
ZRANB2
C17orf80
FAM104A
ISCU
SART3
EIF4ENIF1
PI4KB
IQCG
RPL35A
SUPV3L1
RABGGTB
ADK
AP3M1
PDAP1
BUD31
UFM1
PAF1
MED29
APOM
BAG6
PRSS56
TM9SF1
SF3B3
COG4
XPNPEP3
ST13
NKD1
PTGES2
OSGEP
APEX1
COMMD1
CCT4
PIN4
PDZD2
RPS27A
CLHC1
DDX39B
STK36
RNF25
NEUROG1
NEUROG3
BICRA
RPS29
LRR1
NDUFA10
SUCLG1
IGFBP2
OR2L13
EIF2S3
ANKLE2
KLF17
TAF9
RAD17
AK6
SLC39A7
RXRB
OAZ3
ZSWIM6
TLE6
PDHX
APIP
SEC11C
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
RPL7
RDH10
GADD45GIP1
CPSF4L
GPR78
ATOH1
GADD45G
CDC73
OTX1
MRTO4
EMC1
PCBD2
BNIP3
PDPN
GORAB
GTF3C4
DDX31
CDX1
HES1
RPN1
CNPY2
TMPPE
GLB1
ST18
METTL11B
WBP1L
RBBP7
PNKD
CSRNP1
ZNF383
SMPD1
AXDND1
STK38
SKIL
PRUNE2
TLE3
ALKBH5
MALRD1
ZGPAT
ARFRP1
SP7
LZTFL1
PALM2AKAP2
EBP
CTXN3
MRPL38
MYRIP
PDHB
CLGN
HECTD3
HSPA1B
SRSF11
LRRC40
MEIS2
YWHAB
TKT
GIMAP5
LY6G6D
NEBL
RNF32
SP8
PDE12
CCDC200
VEZT
FGD6
EIF4H
CPVL
CHN2
LRRC8C
GLT8D1
SPCS1
FAM72D
GUK1
CIAO2A
FAM3C
NUP210
HOXB4
PCBP4
SUSD6
DGKZ
HERPUD1
TLE2
MEIS3
FAM107B
TBC1D8
NELFA
TMEM131L
H3C12
DKK1
OTX2
ULBP3
RPS24
BNIP2
ITPRIP
TK1
AFMID
GCNT2
ARSI
ZNF503
TRAP1
SH3D19
PTGES3
MYORG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CS
HOXA3
LIN28B
YAP1
CMTR1
LINGO1
ZNF471
HOXC4
CCDC43
CFAP410
COQ3
RPS10-NUDT3
RPS10
PAPPA
TCHP
RARA
CHD8
RNF138
WDR74
PANK2
TPRA1
ARHGAP24
AXIN2
TMEM70
ZNF746
INSM1
MUSTN1
MAPK8
CCDC169-SOHLH2
CCDC169
NABP1
HOXB1
DSCAML1
HEBP1
CDK5R1
SERTAD3
ZFHX3
QPRT
FBXO46
PCDH18
LIN28A
MPZL2
MTCH2
ZNF341
KRTAP3-1
RSPO4
CLDN2
FAM162A
CCDC58
ASIP
SREBF1
SYT7
SLC35E3
USP17L15
BBS9
ADM
CCDC114
DTNB
KDM3A
CLDN3
SH2B1
LSM14B
TRDMT1
IRS2
SOX12
CERS6
PAX3
LIMS1
TBC1D10A
KAT6B
ZGRF1
LARP7
MBNL3
RARB
NRARP
PKD1
VENTX
MRPL34
PEPD
CYREN
NEDD9
TCF20
GAS2L1
ANO4
KMT2A
ANK2
TBL1XR1
SLC10A2
SYBU
MAP1A
CENPBD1
DHX32
SIPA1
REC8
LPIN1
RCOR3
STARD4
OR8J1
CSNK2A2
RPRM
TLE4
SERPING1
NPAS4
RUNX1T1
H4C6
CSTF2T
PAX6
PAH
TLE1
ASCL1
HOXC6
TFDP2
BTRC
ZFHX4
BRWD1
CER1
ZNF76
MEPCE
ZCWPW1
MSGN1
HOXC5
PRTG
POLR1D
LNX2
PLEKHA5
RNF38
PRTFDC1
MGST1
DLL3
WNT5B
NEURL2
CTSA
TAGLN3
PEX14
PLEKHA6
REST
DDX46
RFFL
BAK1
KRTAP4-12
STRADA
SPIN1
OTUD7B
CASC3
DUSP4
DUSP12
SOX6
NDUFS7
GPX3
DRAP1
C11orf68
ZBTB45
PCF11
STRA6
MTRNR2L2
MTRNR2L8
SPATC1L
FLOT1
C16orf91
SP2
DHRS3
GPR108
TTI2
HOXA2
DNM2
NBAS
ID2
TEPSIN
NDUFAF8
P4HB
MINDY2
TBX2
DOLPP1
STX18
RAB5B
KANSL3
CAMTA1
DONSON
UPF3A
ATF6
CBFA2T2
KATNB1
RBPJ
FRA10AC1
CCDC174
PGK1
DPP9
SMARCD2
GATA4
MTMR4
DUSP6
HUS1
FOXP1
ZNF687
XKR7
TBX3
ARRDC4
ARSG
NRL
KIF21B
MRPS31
ALKBH7
CNOT2
RFX1
POLDIP3
NFKBIA
STIP1
NR2F1
OSBP
RMND5A
DCAF11
ZNF608
PDE4D
PPCDC
RARG
PCNA
IQSEC3
SOD2
ATP5F1B
GPCPD1
RNF207
CBX3
SLC45A4
MDM2
KMT5A
LPCAT3
PPP6R3
SMIM20
SP1
ANKHD1-EIF4EBP3
ANKHD1
EIF2AK3
HEXIM2
SNX16
KAZALD1
MACROH2A1
CRLS1
KNL1
HNRNPD
KCNAB2
POLG
MLEC
TNFRSF19
SHF
SACM1L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
PKN2
SMG6
PRMT5
DAGLB
EIF3D
NLK
FBXO31
ANKRD28
SLC30A4
COX5A
SERPINE1
RAB37
RTN4
HNMT
HMGB1
ARHGEF10L
ILF2
GATD3B
GATD3A
CEP41
RHBDD1
CDS2
PRKACA
TDRKH
DIABLO
CBX5
TMEM101
KIAA0319
EVI5L
NCOA2
ARID4A
TXNDC11
LUC7L2
TOP2A
ID1
SEC14L1
G3BP1
HTR5A
MBD2
BFSP1
WTAP
PRDM10
ARHGAP4
TRIB1
AIFM2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
USP42
DUSP9
NRSN2
IQGAP2
RNF149
NR2C1
GOT1
RASSF2
USPL1
SH3BP2
TMEM60
PHTF2
INAFM2
ING1
PIKFYVE
HES3
HMGCS1
IRF9
CCDC88A
TUBGCP3
ACYP1
B4GAT1
ROGDI
EIF1B
NHLRC1
HNRNPA2B1
CMSS1
SCAP
BHLHE40
EXOSC4
EPM2A
YTHDF2
ANKS4B
STX16
LCK
TSPAN4
GFOD1
MFSD11
POLR3E
PARK7
NANP
HPCAL1
NEO1
PRDM12
HSP90B1
CYB5R4
PCGF1
PCTP
ICAM1
FAAP24
CEP89
ANP32E
MPND
LTBR
ZC2HC1C
SEPTIN9
DLC1
TUBB4B
UBE2C
SRCAP
LOC730183
MVD
POLR2J3
SLC25A19
GBA
CLCN3
GPATCH8
HNRNPC
TRAF4
ATP23
TBL1X
MPV17L2
CELSR3
ADAP1
TANK
CALM2
LBX2
CCDC107
HSPE1-MOB4
HSPE1
HSPD1
CDC42EP3
PRR14
CLK1
H4C12
GLRX5
TMEM94
HNRNPUL1
IRS1
ARNTL
YARS1
S100PBP
SNX3
ZNF148
LRRC59
METTL25
CCDC59
TCF4
ZCCHC3
STAT3
FMC1-LUC7L2
FMC1
DDX1
SHB
NCBP2AS2
NCBP2
ABHD2
NCOA7
HECTD4
TCERG1
DNAJB1
SLC9A1
ZBTB18
KPNB1
CYCS
C8orf37
MTRF1L
JUP
FILIP1L
BAZ1B
KIAA0319L
NRSN1
HIBADH
ARIH2
ZNF740
CSAD
TOMM40
FAM227B
DTWD1
SERPINB9
MSMO1
ACVR1
GGT1
RSRC1
NBPF1
CCNL1
NKIRAS1
NUF2
RAB11A
SLX1B
SLX1A
BOLA2B
ELOVL6
LRCH4
FBXO24
MBD6
VOPP1
FBXO41
TRIP4
LAPTM5
PXMP4
ETV4
LNPEP
NAT8
MFSD6
ARID5A
PSMD3
SRSF2
NFE2
DCP1A
KAT7
MTRNR2L9
HEBP2
ACTL6A
CEBPE
ELF1
CCPG1
C15orf65
ZNF219
MYADM
HBP1
FASTKD1
USP3
PSMD9
HPD
DYNLT1
MRPL4
SKA2
PRR11
POLR3A
ATXN1L
RASSF5
LONRF3
RGS12
GFRA3
CALR
RAI14
MAF1
TMEM9
HMGN4
EEF1AKNMT
SLC7A5
ARHGEF1
CDCA7L
MANF
HSPA5
SKIV2L
NELFE
BOLA2
RPS6KA1
KHSRP
CLTC
OTUD4
PKDCC
HINT2
GSTA4
AP3M2
PARP2
MEF2C
IL6ST
C3
TBRG4
TLN1
CREB3
SNRPF
ARMC1
L1CAM
CIC
HNRNPL
GLRA1
LOC100289561
TRIM44
RAD50
LDLR
C16orf54
PGP
KEAP1
SLCO4C1
TRIM41
ADAM17
TXNRD1
CABIN1
TOP2B
CPLX2
CNPY3
PEX3
ADAT2
BHLHA15
POR
OPA1
TMEM86A
NR1D2
UBAP2
MFN2
STT3A
IARS1
AOPEP
RFESD
MAP11
USP15
FAM72C
ADRM1
TIGD2
YIF1A
H6PD
PSMF1
SPSB3
NUBP2
H4C8
BIN2
DIAPH1
RBM15
BRD2
CBWD5
ADGRG3
CYBA
IQCH
AAGAB
TMEM259
SLC24A1
BAIAP2
GTF2H2
AKIRIN1
PARL
KDM1A
NBN
KMT5C
CYP1A1
C11orf24
WBP4
RNASEH1
RPS6KB2
NBEAL2
NADK
H4C14
DIAPH3
KAT6A
DYNLL1
C1RL
NCDN
BOLA2-SMG1P6
IBTK
MAPKAPK3
CISH
GBE1
MAP3K3
FGR
TMBIM6
MED9
H2AZ2
DENND4B
SEMA5B
SIRT4
SERTAD2
SPAG7
ZNF292
TMEM222
VIRMA
PXYLP1
CNOT1
E2F3
TMCO6
GRHL3
MTHFD1L
MFSD8
ABHD18
CDKN2D
CEP70
FAM72A
SH3TC1
CBWD3
HESX1
NIBAN2
MAN2C1
SLC11A2
ACAT2
PKM
ZNF77
SEPTIN2
PWWP2A
HDLBP
LEKR1
WNT10B
PIWIL2
WDR25
WARS1
MAD2L1BP
ZFYVE21
XRCC3
CD38
PIK3AP1
AKAP1
SLC35E2A
CLIC4
GATAD2A
PLIN2
PTP4A2
DZIP3
CIP2A
MTHFR
AGT
TMX2
PEX2
MED19
EIF4A3
GRWD1
LFNG
C12orf65
SRPRA
TRIAP1
PMPCB
BCAR3
MED23
IDH1
NFE2L1
FGFRL1
TMEM217
TBC1D22B
RNF139
THUMPD3
GFER
PACSIN2
PDK2
MTMR12
MTERF4
H2AX
H4C3
MSANTD4
AK2
ZDHHC4
HNRNPA1
DDX3X
RNF34
MAPKBP1
TOB2
RPS8
MRPS23
NFE2L2
TBCCD1
IFRD2
ZC3H6
MAEA
STMN3
C6orf89
SERPINB6
SLC33A1
AURKAIP1
UBL7
KATNA1
VANGL2
MLLT11
FAM110A
CDC42SE1
TOM1L2
MIA2
DRC3
DUS1L
CLK2
PPP1R13B
CX3CL1
FGA
SDE2
SPATA1
GTF2H2C_2
GTF2H2C
TRAF2
ARFGAP2
RECQL
GOLT1B
C6orf136
PCK1
ASB1
TEDC1
STK11
HAL
NOTCH2
SLC51B
TRABD
TOP1MT
SLC25A45
SLC39A13
CIPC
UGP2
IL27