ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2635935 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◣ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NPAS4
SLC45A4
XKR7
IQSEC3
ANKS4B
AIFM2
HTR5A
NEURL2
CTSA
NHLRC1
LCK
RHBDD1
IRS1
NAT8
NFE2
LBX2
ROGDI
RNF207
DONSON
DUSP9
CRLS1
DAGLB
PDE12
AGT
CELSR3
RARB
IRF9
TMEM86A
ZGPAT
ARFRP1
PCK1
EPS8L2
CX3CL1
ANKRD28
L1CAM
ADAP1
PIWIL2
GLT8D1
GLRA1
RAB37
ETV4
GGT1
SREBF1
CMSS1
FILIP1L
HPCAL1
CPLX2
PLEKHA7
ARFGAP2
SLC30A4
FGA
SERPINB9
TRIM44
ADGRG3
FAM107B
NEDD9
FASTKD1
GPCPD1
TIGD2
TANK
SERPINE1
EIF1B
SLC51B
AMBP
TNFSF4
NDUFS7
ERBB3
IL27
BHLHA15
F2
MACROH2A1
ADGRA1
NRSN2
OTUD7B
MINDY2
LDLR
ITPK1
MAMSTR
AKAP1
APOB
LEKR1
MTRNR2L2
C4BPB
HAL
C1RL
BARHL1
FLOT1
RBKS
BABAM2
WNK4
CSF3
TRNP1
A2M
BAIAP2
BCL3
NFKBIA
RTN4
MAPK8IP2
SHFL
TOP1MT
CST5
PHF8
EEF1B2
ALKBH7
UMPS
APOA1
NRL
DCAF11
RMND5A
AGMAT
C3
TUBGCP3
SEPTIN9
UAP1
SH2B1
CHGB
PDE4D
NR0B2
EPHA10
NR1I3
TRIM31
LOC100289561
IL6ST
SH3PXD2A
PACSIN3
DHRS3
RCL1
CBS
SMARCD2
MRPS31
HERC5
UBAP2
PPCDC
TMEM9
WDR74
EBF4
TOP2B
C6orf136
LOC110384692
C4B_2
C4B
C4A
MTRNR2L8
SNAP25
SST
TXNDC11
TRIM74
TCIRG1
ECH1
SYCE3
RASSF6
NDUFAF5
ESF1
A1BG
SERPINF1
TTI2
SEMA4G
CCL15
RNF213
SCAP
USP42
IQGAP2
G6PC
STAT5B
RARG
APOA2
SEC23A
ZNF503
E2F3
CYP3A43
DNAJB1
PIM1
NLRC4
SERPINB6
PLTP
CNOT2
BDH1
MOGAT3
VTN
SARM1
VAMP5
ALDOC
DCAKD
NMT1
PCNA
CDS2
CLK1
MGST2
PACSIN2
HECTD4
TRIB1
AKTIP
SCRT1
CHD3
PRUNE1
MINDY1
DLC1
NQO2
COMT
ABCC6
ANGPTL8
HPN
APOA5
STMN3
EXOC3L4
KANSL3
NKD1
PANK2
TARS1
RPS6KB2
ANXA9
LHFPL5
RNASEH1
NT5E
MAOB
IBTK
KRT8
CYP19A1
MMP24
VWC2L
TMCO6
PFKFB1
EFNA1
GFOD1
NANP
CYB5R4
KPNA7
MRPL2
KLC4
MASP2
ZNF101
C3orf86
NGEF
TTC6
FOXA1
NTSR2
APP
SRCAP
LOC730183
MED9
PLOD2
AGXT
HPX
TMBIM6
CYBA
SRRM3
SLC25A47
PIKFYVE
HAAO
UGT2B10
RARA
BHLHE40
TSPAN4
CCN2
ACOX2
MDM2
TTC39C
MAP11
DEAF1
DDC
ZNF219
PPP1R13B
LONRF3
UROC1
RBP4
COX5A
CYP1A1
H4C3
HPCA
GATD3B
GATD3A
APOM
PKP4
SEC14L4
CYB5A
TF
TMEM51
DYNLT1
SLC7A5
AHCY
OTUD4
MYDGF
PTP4A1
LPCAT3
MTRF1L
SPRY1
GDAP1L1
ADM
APOL1
SERPINA6
SOWAHD
CLCN3
GABARAPL1
SOAT2
CCL20
ACACA
ARSB
MMP15
CCDC174
SLC25A19
MRPL36
NOM1
EGLN2
ADRM1
ZBTB7C
DSP
STAR
MRPL4
CTSZ
LRRC25
IDH1
RNASET2
GLTPD2
FOXP1
BRD2
NPPB
SLC25A10
CHRNB2
KAT6B
PLEC
SUN2
SKIL
SDCBP2
TMBIM1
CRKL
OSBPL6
MYORG
CFB
RAB17
SLC20A1
NBR1
PCYT2
ITIH3
TWF2
SERPINF2
SLC35D2
LRG1
STX18
HIGD1A
DEPP1
INHBE
TLE6
KATNA1
CPT1A
HNMT
FOXA2
MTHFR
CEP70
MBL2
TLN1
CREB3
ARHGAP32
IKZF3
GPATCH8
ACYP1
ZC2HC1C
CFAP69
IRF2BPL
SHH
TCEA2
MXRA7
RASSF10
FUT5
IL1RN
SVOP
HOXA3
ASAH1
OSBP2
HP
TCTEX1D4
BTBD19
TMEM19
ZNF292
TYMSOS
PLIN2
MIA2
NR1D1
BCAS1
CCDC92B
DKK1
GRB7
SH3D19
UTP14C
CHD9
FABP1
PNKD
SLC39A9
ERH
MPV17L
SLC12A5
USP31
PRRT1B
SCO2
ELOVL6
ARGLU1
BCL6
TRIM50
CLPTM1L
BCAR1
CFL2
KMT5A
MFSD8
ABHD18
ATG2A
ARHGEF16
ANK1
CYTH1
STX16
CDK5RAP1
SLC25A36
GIPC2
HINT2
MTHFD1L
SLC35D1
SLC26A1
VNN3
NR2F6
CES1
SPINK1
GDPGP1
CIB1
FYB2
STAT3
EXOSC4
MAPKAPK3
CISH
NDRG2
PERP
FITM1
ZBTB38
AJUBA
USP43
SOD2
WTAP
SERPINA11
TRAF4
SLC27A5
TINAGL1
OGDHL
PTPRS
MYADM
ROBO4
LRRC59
LRMDA
MAP2K7
FAM102A
LCAT
SAXO2
EFL1
SCAMP5
CERS4
EVI5
OGFR
CEP41
ACSM2B
KBTBD2
CLUAP1
METTL3
PDGFB
ASGR2
HERC1
CTDSP2
NODAL
ACAT2
ORAI3
DLG4
ACADVL
GBE1
SLC22A9
APOC3
STRA8
NIBAN2
ZNF670
TMEM102
SLC11A2
FAM169A
MTRNR2L9
SCRT2
RIN2
TOB2
NCOA4
KIFC3
CCDC200
HES3
RANBP3
LEMD3
SEZ6
SCGN
EPO
TIMM13
MBD6
SRI
UNC80
ATXN1L
PTPRN
SFXN4
KIF21B
TBL1X
CRCP
ZNF367
GRM1
CCNL1
GSTO1
ATP6V0E2
EML2
SRARP
ARIH2
FGL1
CLVS1
GRAMD1A
SLC25A45
SLC7A6OS
PRMT7
DNMT3A
GJA10
CPNE9
EEF1E1
UNC93A
EPM2A
WASHC2C
SELENOP
HUS1
ICAM1
CABLES2
SPATA1
ZNF512B
ANKRD1
LRP10
DSC2
DGKD
MAPK3
CREB3L3
NEK2
LGR5
VGF
GPT
SMIM20
ACY1
GCN1
HADHB
HADHA
ACSL1
IL15RA
SSTR5
SPATA2
BCL9L
PLEKHJ1
MAGOH
ARRB1
PWP1
SHBG
KCNH6
SAT2
CHID1
TFF1
ACSM2A
TJAP1
DNPEP
ACADM
CTNNB1
F7
FAAP24
CEP89
EDEM2
UPF3A
IL13RA1
LRP3
PPM1H
MFN2
SPIN1
TMEM181
ACSL3
NFILZ
ARL14EPL
HSF4
ETFDH
C4orf46
SEC24A
PDCL3
NGLY1
OXSM
SULT1A1
SERPINA1
PHF10
RFC5
CASP7
URB1
PMPCB
KRT18
CYP27A1
NKIRAS1
NR1D2
SORT1
SGK2
DDX1
CCL26
FUT6
PGBD5
CHGA
ANPEP
ROCK2
CLK3
TTC39B
ACSL5
GPR108
NFE2L1
PTGFRN
HS3ST2
TAMALIN
CD14
HPR
TLX2
HERPUD1
TECPR1
FZD5
PRAP1
KDM3A
ARHGAP4
IST1
NOL7
SLC7A6
TACO1
KCNK12
ZNRF1
ZNF44
TBC1D8B
TTC38
LRRC61
ACTR3C
DENND4B
CDIP1
ARSF
OBSL1
INHA
GRIA2
GPR160
CHRM4
SLC23A2
BOLA3
MRPL34
PRKACA
RASSF5
ABHD8
SLC25A13
CUL9
BPIFB2
BAG2
SLC39A3
MAPK11
NUTF2
CENPT
SIRT1
C11orf91
FABP3
CDKN2D
SMAP1
EBAG9
IL7
DZIP3
CIP2A
FCGR2A
PICALM
PCK2
DENND2B
MTF2
RBM7
C11orf71
TRIP4
ASB1
RANBP2
CDK6
ORM1
SGPP1
PRMT5
CPVL
CTDSP1
RABGGTA
LIN54
N4BP2L1
DNASE1
ARHGEF10L
MST1
TK1
AFMID
RNF130
KLF11
IFNGR1
FAM114A1
PUS10
PEX13
TNFRSF12A
PAQR4
ANGPTL1
CHN2
KRTAP3-1
SETBP1
OSMR
SLC34A3
ZCCHC3
CLCN6
HEATR5A
TP53INP2
HSD3B7
PBDC1
HIBADH
SLC16A5
MARCHF4
PDE1C
IFRD1
AP3B2
MRPL39
ARPP19
RITA1
SMAD7
ZNF225
HRG
RSPH3
ADAR
CYP8B1
PARP3
ZNF346
POLDIP3
TTC31
SYN3
RRAS
PEX14
PC
NME1
EXOC2
SEC62
SNX3
COLEC11
RNF144A
RAP1GAP
NME2
AMOTL2
MAF
ID1
NRSN1
TAF1A
RBMS1
SCARB1
HGFAC
ANXA4
AAK1
TMA16
METTL9
COQ10A
GPT2
EAPP
GCKR
USF2
PEX2
LFNG
PDSS2
PRR5
CEND1
PRKCZ
BPIFB1
UBR4
ACTR6
SLC2A4RG
MTIF2
STK39
CAND1
SSUH2
NDE1
MARF1
ZNRF3
TTC12
H4C12
TTC3
HNRNPF
CRK
PSMD3
EPHX2
SHB
LONP2
ABCC11
SPHK1
PIP5K1C
HEXA
LOC388282
TASOR2
OPA1
RPS7
MIEN1
PLCB1
CIDEC
C17orf99
ARHGEF40
DNAJC6
MRPS16
SULT1A4
SULT1A3
FGG
BSG
FANCL
AHSG
KNG1
NOL3
MVD
POLR2C
RFC1
ZSWIM7
TTC19
LOX
DPY19L4
ENO1
SSNA1
ANAPC2
RBM39
KIF13B
PCGF2
CNOT6L
PIM3
PALM3
THUMPD3
TRMT2A
RANBP1
PGRMC2
PEX3
ADAT2
CLK2
PIK3R3
PET117
KAT14
MTERF4
AP5S1
ATP7B
ALG11
SULT6B1
SBK3
PROB1
DHX35
RHOBTB3
SULT2A1
RBM28
ZNF787
COX20
GTF2H2C_2
GTF2H2C
PCCA
TINF2
RBM15
ST20-MTHFS
S100A16
C2
HELB
RTP3
CBFA2T2
TLE3
RPL31
NECAP2
BAG6
WDR36
ENO3
TMEM140
CAMTA1
RPS8
CENPA
PGLYRP2
EIF2D
CYP7A1
NBPF11
NOS2
YARS1
S100PBP
SLC44A1
PLXNB2
H3C3
H2BC3
SAR1B
TMEM242
C16orf70
SCOC
SPOP
WDR48
SCN11A
TAOK3
BCL2L11
CHST15
JMY
SMIM8
AGPS
SLC25A18
PGC
C8A
PALMD
RPL27
PDXP
CFAP43
SLF2
HNF1A
ZKSCAN2
CLPX
GPR78
CPSF4L
LTV1
ALKBH2
SARDH
B4GALT3
CHPT1
ALDH3A2
PDHB
SNRPF
PPP2R5A
DRG1
ZFHX3
ZNF148
KAT6A
NPRL2
CYB561D2
CEACAM1
SEPTIN2
HDLBP
AZIN1
PMS2
AIMP2
ATP5MC3
CLIC1
MOB4
PDE8A
GINS1
STAP2
AMT
NOC3L
SLC17A9
LRRC37A3
ABHD14B
ABHD14A-ACY1
ABHD14A
KLHL18
KIF9
KRTAP5-7
C8B
SLC46A1
KDM1A
DBI
C2orf76
MRPS36
EML4
ARFGEF2
RAD50
STK11
FOXN2
NEU4
RASSF7
LMNTD2
RAD54L2
PLBD2
GTF3C3
SULT1A2
IFNLR1
RARRES2
LEO1
PUM2
LYZ
SERPINC1
ACSL6
STAT1
LOC114841035
FKBP2
NFKBIZ
ARL2BP
ZNF69
OLFM2
SIPA1
PLEKHN1
BICDL1
CXXC5
ABLIM1
ORM2
AKAP10
AATF
GPR158
IGFALS
AOPEP
DUS1L
IKBKG
TIGD1
EIF4E2
ZNF217
TTLL9
RTN2
ADCY10
HDAC2
C17orf75
WASHC2A
SIKE1
NMNAT3
PROZ
HGD
TRMT6
MCM8
UNKL
CRH
MRPL44
TRIM8
TSC2