ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662659 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
TEPSIN
NDUFAF8
SP2
DNM2
P4HB
MPND
RAB5B
KATNB1
ARRDC4
DOLPP1
ATP5F1B
ARNTL
RFX1
AP3M2
EIF2AK3
ARID4A
ZNF687
SP1
PGP
HNRNPC
CNOT1
PRKACA
EVI5L
BABAM1
TMEM94
STIP1
CIC
MPV17L2
ZNF77
NLK
TOP2A
SKA2
PRR11
OSBP
GOT1
HNRNPL
PROSER3
HSPB6
TRAF2
METTL17
ALKBH7
TDRKH
PRR14
GLRX5
CAMTA1
UBE2C
RECQL
GOLT1B
TOM1L2
DRC3
ACTL6A
KIAA0319L
NCDN
KHSRP
GPR108
ANKHD1-EIF4EBP3
ANKHD1
TOMM40
TUBB4B
HNRNPUL1
TEDC1
PXMP4
FDFT1
MSMO1
HSPA5
LRCH4
FBXO24
SLX1B
SLX1A
BOLA2B
BOLA2
RFWD3
COPZ1
FAAP24
CEP89
WBP1
LRRC45
CENPX
SPAG7
TCERG1
ZSWIM4
G3BP1
SNRPF
BOLA2-SMG1P6
TCF19
CCHCR1
MTMR4
FAM72C
FAM72A
KAT6B
KAT7
PAN2
HMGCS1
FRYL
DROSHA
C5orf22
KDM4B
H2AZ2
SARNP
ORMDL2
CNOT3
COQ8A
MANF
FAM72D
AK2
KCNAB2
OS9
DDA1
ZFYVE21
XRCC3
KPNB1
CHCHD6
SHC1
CKS1B
ILF2
MTFR2
MVD
ABHD2
UBALD2
ZBTB3
JUP
NRL
DCAF11
MTMR12
HDGFL2
SLC25A25
NAIF1
PDK2
RBM27
HSP90B1
TYK2
TMEM60
PHTF2
SLC25A42
STT3A
CNPY3
PRPF40A
ARL6IP6
TMX2
MED19
ISOC2
ZNF691
YIF1A
MAF1
SPSB3
NUBP2
TBC1D10B
MYLPF
WDCP
CENPA
YJU2
XAB2
GBF1
GATAD2A
DDX39A
RAB3A
ASF1B
TMEM160
FLAD1
ZDHHC16
EXOSC1
ARMC1
DERL3
DNAJC14
ATP5MC1
ZNF555
CBX5
HNRNPA1
PWWP2A
GATAD2B
CFAP43
PAIP2B
H3-3B
PRRC2B
ZNF8
MSANTD4
ZNF574
CENPF
EIF4A1
ABL1
IARS1
AP2A1
VCP
ZNF775
ARHGAP19
DDX49
COPE
RPLP0
TICRR
TESK2
NUDT2
KIF24
MORN4
DCAF15
PODNL1
SEL1L
NUMB
ZNF718
ZNF595
EEF1AKNMT
LENG1
CGGBP1
ZNF654
ZBTB5
JPT1
PIP4P1
FAM72B
ABCB8
CCT7
PRADC1
MAEA
ZNF785
ZSWIM1
TBCCD1
DNAJB11
ATP5PD
CYTH2
PABPN1
DCUN1D4
SOD2
ACAT2
RAB11B
NGDN
IMMP1L
ELP4
CDC23
ZSWIM3
ACOT8
UBE2T
FAM204A
OGFOD1
NUDT21
CALR
AGPAT1
RNF5
GOLPH3L
HBP1
ZNF143
LOC101927572
ALKBH6
NFE2L1
BUB3
SDF2L1
GOLGB1
SIRT2
NFKBIB
CANX
EMC9
ELOC
PHB
RAB4B
SLC25A28
LAS1L
EXOC4
DNAJB5
RRBP1
FAM126A
DDOST
MTR
PDXP
SPTLC2
HGS
ARL16
TOM1
KCTD7
GSTO2
CCDC61
KLHDC10
ZSCAN20
TNRC6B
LCMT1
CDCA3
UGP2
ERI3
POGLUT2
BIVM
PSMD4
PTBP1
C10orf143
ANAPC5
RNF181
NFATC2IP
ECT2
PANK2
PIN1
CDKN3
TMEM217
TBC1D22B
MNS1
LMCD1
SAMM50
SIN3A
NUP107
CALR3
C19orf44
RBM42
TCP1
MRPL18
USF3
FBXO5
DPH2
TARS2
C7orf57
HACL1
BTD
BPGM
CYLD
ATP5IF1
DCP2
ANKZF1
RAD51B
CEP41
SLC25A19
NEMP1
STIL
POTEF
KHDC4
ANP32E
SRP9
HINT2
ZNF556
PPP1R3F
SPC25
THAP1
MTOR
MAP3K3
SSR3
ZNF519
SNRNP25
POLR3K
GSK3B
NF2
STK40
PSMA5
SPRYD3
CKAP2L
ARL17B
ARL17A
INTS4
FDXR
ENSA
CCDC66
TMEM218
ETV5
H2AC19
H2AC18
PSAT1
OTUB2
FDPS
TMPO
LAPTM4A
RWDD1
TPRKB
MYH10
IBTK
ZNF774
MZT1
BORA
FAM83D
RBM14-RBM4
RBM14
HOMEZ
UNG
LTN1
ANKRD39
INCENP
TROAP
PGK1
COPS7B
AGPAT5
RGMB
DCTN4
PDE6D
ZNF724
EHBP1
RUVBL1
OPA3
LMAN2
FAM117A
MACO1
ANP32A
PCNX3
WDR89
MAP3K11
KDM4D
CWC15
LCA5
MXD1
UVRAG
GCDH
MVK
VPS35
PCLAF
NEK10
BCAS3
NFYC
TRAPPC6A
BLOC1S3
TMA7
CCDC51
CKAP5
PPP2R5E
MSTO1
ZNF564
TCTN3
GLCCI1
YWHAQ
PRMT1
BAGE5
BAGE4
BAGE3
BAGE
VIRMA
C16orf95
DICER1
TTLL5
ERG28
ATP7B
ALG11
CCDC77
KBTBD8
STK11
PPWD1
CENPK
NDUFS8
CYB5B
JPT2
RBM15
TMEM45A
H2AX
STARD3NL
NCBP2AS2
NCBP2
MAMSTR
TRAFD1
MRTFA
SIVA1
HMGCR
DBP
WAPL
PNKD
CEP68
AAMP
OSCP1
RND1
FER
COPS4
CDR2
RPS5
PNPO
FKBP14
PPM1B
RLN1
PAF1
MED29
CYB5A
GLO1
EIF3F
DAZAP2
CCDC146
GIPC1
NDUFB3
FAM126B
TXNDC16
YBX1
TRIM68
F11R
MYH14
PARP3
RRP9
YIPF4
SFXN5
RAP2A
TMEM161A
KIF1B
TMEM205
CCDC159
TTC16
PTRH1
WDR25
WARS1
RMI2
TIMM17A
ZMYM2
FRMD5
SLC33A1
TTF2
RLN2
MDM1
GID4
ATPAF2
TSPAN31
SEC31A
THAP9
TBCB
POLR2I
TMEM53
ARMH1
FBH1
ANKRD16
PLPBP
POC5
TANGO2
ARVCF
CCNL2
ING1
PSMB7
CKS2
MCM5
ZNF141
HJURP
ETF1
SPRING1
RNFT2
TWNK
MRPL43
ZNF695
HNRNPR
MAGI3
DDX19B
AARS1
CDK5RAP3
MCM3
VPS26B
NCAPD3
NOL6
ACTR1A
C2orf42
ADD1
PMPCB
FAR1
NABP2
MCCC1
LIN37
WBP1L
KDM4A
DDT
BRIP1
CEP131
NARF
KANSL2
TULP3
ZC3H10
GET3
KMT5C
ARL6IP1
ING4
RAB5C
ZMYM5
RPL13A
SF3B5
NME7
BLZF1
RTN4IP1
QRSL1
ZNF436
TPRN
RBX1
RTN4
CDC25A
CWF19L1
GFM1
TOMM22
PCYOX1L
HNRNPAB
PSMB3
HMGB2
PMS2
AIMP2
KLF6
NDUFA2
IK
TTBK2
PICK1
FAM161B
COQ6
PHF14
TPX2
USP1
SZT2
MED8
TXNIP
L3MBTL2
TSACC
CCT3
MON1B
ZNF513
LAMTOR4
POTEE
RNF121
LOC100133315
NSDHL
CETN2
RBM48
PEX1
SELENOI
ADGRF3
SNX32
FICD
HSCB
CHEK2
DHX8
STPG1
NIPAL3
TMBIM6
SLIRP
ALKBH1
ZCCHC17
SNRNP40
MRPL20
CEP164
PPP5D1
CALM3
EHD4
GGCT
ALKBH3
UTP23
UFD1
CDC45
CCNB2
RARS2
ORC3
CAB39L
ZSCAN32
ZNF174
SETDB2-PHF11
SETDB2
CHAF1A
C5orf51
ANKRD54
LIN52
ALDH6A1
ORC2
RAD54L
KANSL1
RPL18A
SARS2
MRPS12
EDEM3
DNAAF3
TMEM38A
SMIM7
SLC26A2
WBP11
C12orf60
RMND5A
XPO1
PARL
WDR81
SFPQ
SMARCA2
CABIN1
SERP1
EIF2A
PPOX
CALU
CCDC130
SETD3
CCNK
OSBPL9
ZNF789
PMF1-BGLAP
PMF1
FAM185A
TLE6
RUVBL2
GYS1
MFAP3
FAM114A2
CHD6
DDTL
CDC25C
MTRR
FASTKD3
ELAC2
FHIT
PPP2R5A
IP6K1
EIF5
ZBTB9
CAND1
RERE
WDTC1
ZFAND4
CNNM2
TIMM44
RPA2
HMGB1
RAP2B
TXNL4B
DHX38
MRPS30
FNBP4
SHKBP1
SPC24
HSD17B7
RNF34
ZNF688
RBM4
BMT2
MAP3K7CL
BAZ1B
RCL1
ZWINT
PPP6R3
TMED10
WHAMM
PPM1K
ABCA7
MIIP
NEU1
DAPK3
EIF2B2
XRCC4
TMEM167A
TPD52L2
RUBCN
RACGAP1
C1orf109
ATF7-NPFF
ATF7
PAK4
KIF20A
BRD8
INPP5B
VBP1
TTC31
CCDC142
RAB6A
SLF2
AURKAIP1
WDR45
NAP1L4
RAB39A
CEP152
KMT5A
MLH1
EPM2AIP1
ATP6AP1
HSD17B12
ZNF740
CSAD
PCBP2
ASPM
ENPP5
ALG10B
UBP1
PPP1R12B
SWSAP1
TECPR1
VPS4B
MED15
ID2
EXD1
CHP1
PRCD
CEP192
BUB1
COX14
TUT1
NUF2
RBM39
GTF3C5
CHCHD2
DLGAP5
FCF1
AREL1
TPCN1
IQCD
RBM6
SETD5
PIK3CA
MCRS1
RPL31
SNRPE
MORN2
DHX57
PHF12
SCAI
UBE2S
NOL7
RRN3
RPN2
MROH8
MIGA1
SLC39A1
MPHOSPH8
CREB3L4
PITX2
GRK6
MSH5
KDM5A
WDR46
PFDN6
ZNF586
RAB8A
TOGARAM1
KLHL28
LMBR1L
CIART
ZNF493
WDR74
ZBTB26
ZNF547
TRAPPC2B
C9orf85
ABHD17B
PGAP2
OARD1
NFYA
TRIM9
PDCD11
ATP5MD
RPS26
BRAP
ACAD10
KLF5
ROGDI
SPNS1
USP16
MOSPD3
SMIM12
NDUFAF2
ERCC8
ISY1-RAB43
ISY1
SP3
BBX
DHCR24
CHCHD3
MFSD12
RPL27
INTS1
AGFG2
MRPS10
ZBTB6
SLC39A3
PRDM10
ZNF773
STARD7
HYKK
SCOC
TFB2M
CNST
APOLD1
TLE4
RASSF7
LMNTD2
COPS7A
PNN
DPH7
NHP2
IVD
ZNF529
TMEM256
PGD
FAM156A
KCTD9
CDCA2
CAT
POP5
MIEF2
POLR2J3
ZFAND2A
UBL5
PRPF6
MORF4L2
CCDC174
CDKN2D
SLC44A1
SNRNP200
SDF4
B3GALT6
EXD2
TRAF7
LINC02210-CRHR1
NR3C2
PPFIBP1
CREBRF
XRRA1
SPCS2
TDP1
EFCAB11
MCM6
ZNF720
SON
GART
POLL
DPCD
ERCC2
PRPF8
RNF26
TMEM97
C6orf89
BOD1L1
TK1
AFMID
SMIM4
CCNB1
FAM228B
SF3B6
WDR62
THAP8
HLTF
LARP4
ZNF419
ANKRD28
DYNLL1
SNRPD2
QPCTL
PPIP5K1
RBM8A
INTS3
TRIM45
PACSIN2
STAT2
EIF1AD
BANF1
LETMD1
PCNT
C21orf58
ASB8
ARHGEF10
HIBADH
TMEM230
EFCAB14
SNIP1
ZNF138
NUCKS1
TTC14
SAP30L
WBP2
TADA2B
CCDC96
ZGPAT
ARFRP1
H4C8
ZBTB45
EEF1E1
DCP1A
BCL2L1
ZNF444
NUDT16
PSMA3
PI4K2A
CHMP4B
KIF18B
UMAD1
SLC39A9
ERH
GPR137
ZNF367
RSPRY1
PSME3IP1
ING3
TRAPPC11
RWDD4
DDX18
ZNF726
CHD8
DCAKD
NMT1
TARBP2
ZSWIM8
CYCS
DHCR7
GNA12
PSMD9
HPD
TMEM248
FAF1
TSTD2
NCBP1
KPNA2
ZMAT2
PEX12
MLEC
OGDH
HAGH
FAHD1
HINFP
ESCO2
KHDRBS2
RPS20
DGLUCY
GSTCD
INTS12
RPS6KA5
C16orf71
ANKS3
ZNF267
RPS7
NRDC
ZNF747
NUDC
PPIH
BTRC
TRAPPC4
RPS25