ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◣ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
DYNC1LI2
NME6
POLR3F
DZANK1
RWDD1
SUDS3
VTI1B
PSMG2
CEP76
IPO13
NUP85
EFTUD2
CCDC103
VDAC2
NVL
GATA4
STAM2
HOXA2
LYRM4
FARS2
SKP1
HSPA9
NCLN
GOSR2
TBCK
AIMP1
UPF2
DCTN1
SRD5A1
NSUN2
POLR2E
NUP205
ATP5MG
TSN
REXO1
EXOSC5
BCKDHA
COX7A2L
MRPS7
GGA3
SEC61B
BLCAP
C19orf48
STAM
MRPS5
TSNAX
ACTR10
ICE1
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
C17orf80
FAM104A
HOXB3
PI4KB
PAK1IP1
C6orf52
EIF4ENIF1
RABGGTB
USP1
ZRANB2
IRGQ
ZNF576
XPNPEP3
ST13
RBKS
BABAM2
ADK
AP3M1
UBE2I
SMC2
ANAPC7
CELF4
UFM1
RPS23
ATP6AP1L
TM9SF1
DPH6
RPS12
RUNX1T1
IQCG
RPL35A
CAPRIN1
NDUFA4
SF3B3
COG4
ISCU
SART3
PCBP1
PAF1
MED29
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
DDX39B
RBBP5
SUCLG1
CLGN
MRPL11
TMED1
RPS27A
CLHC1
NEO1
OSGEP
APEX1
NDUFA10
APOM
BAG6
TBX3
NR2F1
COMMD1
CCT4
OAZ3
DMD
HOXC6
HOXC4
VPS13A
ELOVL6
HEXIM2
HOXA4
PTGES2
PDE12
BICRA
MRTO4
EMC1
RSRC1
ANKLE2
HES1
LIN28A
PDAP1
BUD31
STK36
RNF25
EIF2S3
PRUNE2
DIAPH3
CXXC4
CPA1
RPL7
RDH10
ZNF608
PIN4
ZFHX4
MGST1
SKIL
TAF9
RAD17
AK6
RARA
TTI2
P2RX6
CNR1
ASPG
ACKR3
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
ID2
MRTFB
FLVCR1
ZNF503
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
ZGPAT
ARFRP1
LIX1
KIAA1217
RPN1
HOXA3
USP34
ZNF587B
FGF7
CNPY2
POLR3A
PKDCC
HOXB8
PPP1R3D
FAM217B
MDC1
CYP26A1
ACVR1
TNP1
NDUFS7
RBPJ
HOXC5
EIF3D
CCDC183
PEDS1-UBE2V1
PEDS1
KDM3A
PCDH18
GABRB2
RPS29
LRR1
DSCAML1
ZBTB18
TXNRD1
GADD45GIP1
HOXA5
PCDH15
SPRR2F
TLE4
CCDC174
PLAGL1
SALL4
ABCC9
ZFHX3
POLDIP3
SEC11C
METTL25
CCDC59
TMSB4Y
CBFA2T2
POU2F1
SH2B1
NBAS
H2BC5
EYA1
CDC42EP3
VANGL2
GORAB
ZNF383
REC8
ECHDC1
CAPN7
FGF8
RAPGEF4
TBX18
SVEP1
IGF2BP3
C9orf153
GTF3C4
DDX31
HUS1
CDC73
CCN2
NELL2
GFRA3
SORBS2
SCHIP1
NNMT
C12orf29
RCOR3
ZNF341
UBA3
ZYX
HEY2
PDGFRA
CDK6
MYLK3
ZNF430
TNFRSF19
ID3
NT5C3A
ZP3
FOXP1
ZNF746
HNRNPD
OTUD4
PBX2
CDH18
RNF207
HOXB5
WDR74
ALKBH5
VTN
IRS2
RCOR1
SYNJ2BP-COX16
SYNJ2BP
VOPP1
MAD2L2
DRAXIN
CACYBP
ANXA11
FHL2
BNIP3
TCF4
MGST2
DUSP6
SHB
CEP70
CFAP69
TRIP12
FBXO36
ESRRG
PCNX4
ZNF853
CDH3
NDUFB3
FAM126B
SERTAD2
MID1
ACYP1
ZC2HC1C
ZSCAN30
DLG2
CS
ITGBL1
OLFML1
SLITRK6
ALPK2
PCBD2
DNAH12
MPPED2
WWP2
TNNT2
BNIP2
IL1RAPL1
CLASP2
ATXN2L
DHRS3
CEP41
SLC25A6
PDCL3
CBX3
HNRNPA2B1
FNDC5
SUPT7L
SLC4A1AP
KAT6B
CELF2
QPRT
SLC28A3
GRWD1
CTF1
ADAMTS3
ELK4
RANBP17
GFRA1
RGS5
PAQR8
DGKZ
SEC24A
DNAJB4
RASSF4
ART5
NEUROG2
NEUROG3
MTRNR2L2
MTRNR2L8
RARB
SPATC1L
VEZT
FGD6
FLOT1
PMAIP1
C16orf91
NEUROG1
ATOH1
CCDC200
SP2
IGFBP2
GPR108
MRPL38
NEURL2
CTSA
GLT8D1
PDHX
APIP
DNM2
TPRA1
TEPSIN
NDUFAF8
P4HB
MINDY2
RPS10-NUDT3
RPS10
AXDND1
DOLPP1
STX18
RAB5B
KANSL3
CAMTA1
DONSON
UPF3A
HSPA1B
NPAS4
ANK2
ATF6
SP5
PDHB
OTUD7B
KATNB1
PANK2
FRA10AC1
PGK1
DPP9
SMARCD2
MTMR4
ZNF687
XKR7
ARRDC4
ARSG
NRL
KIF21B
SRSF11
MRPS31
ALKBH7
ST18
CNOT2
RFX1
LRRC40
NFKBIA
STIP1
OSBP
SPCS1
RMND5A
DCAF11
INSM1
PDE4D
PPCDC
RARG
PCNA
IQSEC3
SOD2
ATP5F1B
GPCPD1
MRPL34
SLC45A4
MDM2
KMT5A
LPCAT3
PPP6R3
SMIM20
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
EIF2AK3
SNX16
KAZALD1
MACROH2A1
GRSF1
NELFA
CRLS1
GADD45G
TLE6
KNL1
KCNAB2
POLG
TMEM70
MLEC
SHF
SACM1L
MYRIP
METTL11B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
PKN2
CCDC43
SMG6
PRMT5
DAGLB
RBBP7
NLK
FBXO31
ANKRD28
SLC30A4
COX5A
SERPINE1
RAB37
RTN4
HNMT
SREBF1
EIF4H
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
HMGB1
ILF2
GATD3B
GATD3A
RHBDD1
CDS2
PRKACA
TDRKH
DIABLO
CBX5
TMEM101
KIAA0319
EVI5L
NCOA2
ARID4A
TXNDC11
LUC7L2
TOP2A
ID1
PNKD
SEC14L1
G3BP1
HTR5A
MBD2
ZNF76
BFSP1
WTAP
KMT2A
PRDM10
ARHGAP4
TRIB1
AIFM2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
USP42
DUSP9
NRSN2
IQGAP2
RNF149
NR2C1
GOT1
RASSF2
NEDD9
USPL1
SH3BP2
TMEM60
PHTF2
INAFM2
ING1
PIKFYVE
HES3
HMGCS1
IRF9
CCDC88A
TUBGCP3
B4GAT1
ROGDI
FAM107B
CHD8
EIF1B
CPSF4L
NHLRC1
CMSS1
SCAP
BHLHE40
ADM
EXOSC4
EPM2A
YTHDF2
ANKS4B
STX16
LCK
TSPAN4
GFOD1
TCHP
MFSD11
POLR3E
PARK7
NANP
HPCAL1
PRDM12
HSP90B1
CYB5R4
PCGF1
PCTP
ICAM1
FAAP24
CEP89
ANP32E
MPND
LTBR
SEPTIN9
DLC1
TUBB4B
UBE2C
SRCAP
LOC730183
MVD
POLR2J3
SLC25A19
GBA
BRWD1
MEPCE
CLCN3
GPATCH8
HNRNPC
TRAF4
ATP23
TBL1X
MPV17L2
CELSR3
ADAP1
TANK
CASC3
CALM2
LBX2
ARHGAP24
CCDC107
HSPE1-MOB4
HSPE1
HSPD1
PRR14
CLK1
H4C12
GLRX5
TMEM94
HNRNPUL1
IRS1
DUSP12
ARNTL
YARS1
S100PBP
SNX3
ZCWPW1
HOXB4
ZNF148
LRRC59
LPIN1
ZCCHC3
STAT3
FMC1-LUC7L2
FMC1
DDX1
NCBP2AS2
NCBP2
ABHD2
TMPPE
GLB1
NCOA7
HECTD4
TCERG1
DNAJB1
SLC9A1
CSRNP1
KPNB1
CYCS
C8orf37
MTRF1L
JUP
STARD4
FILIP1L
BAZ1B
KIAA0319L
NRSN1
HIBADH
ARIH2
CMTR1
ZNF740
CSAD
TOMM40
FAM227B
DTWD1
SERPINB9
MSMO1
GGT1
FAM72D
NBPF1
CCNL1
WBP1L
PEX14
NKIRAS1
NUF2
RAB11A
SLX1B
SLX1A
BOLA2B
LRCH4
FBXO24
MBD6
FBXO41
TRIP4
LAPTM5
PXMP4
ETV4
LNPEP
NAT8
MFSD6
ARID5A
PSMD3
SRSF2
NFE2
DCP1A
KAT7
MTRNR2L9
HEBP2
ACTL6A
CEBPE
ELF1
CCPG1
C15orf65
ZNF219
MYADM
HBP1
FASTKD1
USP3
PSMD9
HPD
DYNLT1
MRPL4
SKA2
PRR11
ATXN1L
RASSF5
LONRF3
RGS12
CPVL
CALR
RAI14
MAF1
HMGN4
EEF1AKNMT
SLC7A5
ARHGEF1
CDCA7L
MANF
HSPA5
SKIV2L
NELFE
BOLA2
RPS6KA1
KHSRP
CLTC
HINT2
GSTA4
AP3M2
PARP2
MEF2C
IL6ST
C3
TBRG4
TLN1
CREB3
SNRPF
ARMC1
L1CAM
CIC
PLEKHA6
HNRNPL
GLRA1
LOC100289561
TRIM44
RAD50
LDLR
CLDN2
C16orf54
PGP
KEAP1
SLCO4C1
TRIM41
ADAM17
CABIN1
TOP2B
CPLX2
CNPY3
PEX3
ADAT2
BHLHA15
CHN2
POR
OPA1
TMEM86A
NR1D2
UBAP2
MFN2
STT3A
STK38
IARS1
AOPEP
RFESD
MAP11
USP15
FAM72C
ADRM1
TIGD2
YIF1A
H6PD
PSMF1
SPSB3
NUBP2
H4C8
PTGES3
BIN2
DIAPH1
SPIN1
RPS24
RBM15
BRD2
CBWD5
ADGRG3
CYBA
IQCH
AAGAB
TMEM259
SLC24A1
BAIAP2
GTF2H2
AKIRIN1
PARL
SPECC1
KDM1A
NBN
KMT5C
CYP1A1
C11orf24
WBP4
RNASEH1
RPS6KB2
NBEAL2
NADK
H4C14
KAT6A
DYNLL1
C1RL
NCDN
BOLA2-SMG1P6
IBTK
MAPKAPK3
CISH
GBE1
MAP3K3
ZBTB45
FGR
TMBIM6
MED9
H2AZ2
DENND4B
SEMA5B
TBC1D8
SIRT4
SPAG7
FAM162A
CCDC58
ZNF292
TMEM222
VIRMA
SLC35E3
PXYLP1
CNOT1
E2F3
TMCO6
GRHL3
MTHFD1L
MFSD8
ABHD18
CDKN2D
FAM72A
SH3TC1
TLE3
CBWD3
HESX1
NIBAN2
MAN2C1
SLC11A2
ACAT2
PKM
ZNF77
SEPTIN2
PWWP2A
HDLBP
LEKR1
WNT10B
PIWIL2
WDR25
WARS1
MAD2L1BP
ZFYVE21
XRCC3
CD38
PIK3AP1
AKAP1
SLC35E2A
CLIC4
GATAD2A
DRAP1
C11orf68
PLIN2
PTP4A2
DZIP3
CIP2A
MTHFR
AGT
TMX2
PEX2
MED19
OTX1
EIF4A3
LFNG
C12orf65
SRPRA
TRIAP1
PMPCB
BCAR3
MED23
KLF17
IDH1
NFE2L1
FGFRL1
TMEM217
TBC1D22B
RNF139
THUMPD3
GFER
PACSIN2
PDK2
MTMR12
MTERF4
H2AX
H4C3
MSANTD4
AK2
ZDHHC4
HNRNPA1
DDX3X
RNF34
MAPKBP1
TOB2
RPS8
MRPS23
NFE2L2
TBCCD1
IFRD2
ZC3H6
MAEA
STMN3
C6orf89
SERPINB6
SLC33A1
AURKAIP1
UBL7
KATNA1
MLLT11
FAM110A
CDC42SE1
TOM1L2
MIA2
DRC3
DUS1L
CLK2
PPP1R13B
CX3CL1
FGA
SDE2
SPATA1
GTF2H2C_2
GTF2H2C
TRAF2
ARFGAP2
RECQL
GOLT1B
C6orf136
PCK1
ASB1
TEDC1
STK11
HAL
NOTCH2
SLC51B
TRABD
TOP1MT
SLC25A45
SLC39A13
CIPC
UGP2
IL27
LEMD2
DENND2D
MCU
BZW2
LRRC45
CENPX
CTNNB1
PPIB
H4C15
ACACA
RBM25
NREP
PLEKHA7
RXRA
PA2G4