ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
MRPS28
ING1
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
RBKS
BABAM2
CNOT2
POLD2
ZBTB7C
RARG
GATD3B
GATD3A
SMARCD2
KANSL3
ZCCHC24
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
HORMAD1
DONSON
METTL3
TUBB
MTRNR2L2
RAE1
FLOT1
DYNLT1
ZFP36L1
ZGPAT
ARFRP1
KDM3A
WDR74
CCDC174
NANP
MBD2
LOC114841035
FKBP2
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
RASA4B
EIF5
MAML3
GPR108
CTF1
NR2C1
NUDT15
UQCR11
USP42
BACE2
SKIDA1
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK10
PTGES3
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
CLCN3
TMEM241
STAT2
PMPCB
MIGA1
DUS1L
CASP9
CYB5R4
SNRPA
C19orf54
ATP6V0B
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
NCOA7
TRABD
MED9
TEX264
RPL37
USP37
CNOT9
PDCL
CBR4
SMIM20
UQCRC2
FXYD3
RNF207
SREBF1
NCLN
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
DRG1
SZT2
MED8
SERTAD2
GMNN
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
CHCHD1
TECPR1
MELTF
GCN1
SENP8
MYO9A
ST8SIA6
MINDY3
NPNT
SH3YL1
ACP1
RNF220
RGPD2
RGPD1
NEURL2
CTSA
AARS2
MRPL54
TP53INP2
APOM
BAG6
SH2B1
ADAM17
ABHD3
PARP9
DTX3L
MTRNR2L9
AFF1
HBP1
SLC11A2
ROGDI
C12orf73
RPS3A
TNPO3
TDRD3
CCL28
SOD2
WTAP
MYADM
GDPGP1
CIB1
RPL5
KLHDC2
FDXACB1
C11orf1
SIPA1
MRPS16
DNAJC27
ATXN2
MKRN3
SCNM1
LYSMD1
PCCA
RIMS1
EXOSC4
TTK
SERPINI1
PDCD10
PCTP
CDKN2D
RPS19
DBP
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ENTPD5
BBOF1
ZNF133
VARS1
NAA40
TLR5
BRD2
NOTCH1
ANG
RNASE4
FABP5
MBD6
CGGBP1
C3orf38
ADH1C
ACYP1
ZC2HC1C
CCDC200
RBM19
SLC30A4
CEP70
SRCAP
LOC730183
MINDY2
UBE2V2
SLC39A9
ERH
TAF6L
ARIH2
DHRS3
MDM2
SEC24C
ARID4A
DZIP3
CIP2A
ZNF746
CLK2
DUSP4
BCO2
HDAC9
LCN2
ZNF384
KAT6B
ZNF77
AP1B1
TRIM38
TMED10
ETFRF1
CFAP94
NEPRO
SKIV2L
NELFE
ESRP1
ABHD14B
AP2M1
PRUNE1
MINDY1
CD46
ACSS3
STAM2
SNX12
TBC1D22A
SMPD2
PPIL6
KCNQ4
FDX1
KLF5
OTUD5
MIEN1
ANXA7
ALKBH7
DPP9
URGCP
IFT22
URGCP-MRPS24
POMP
DNAH14
MACROH2A1
ZNF85
SCAP
ZNF318
GBA
LEKR1
ECH1
LSM8
HGH1
LETMD1
TXNDC11
SPAG16
GPATCH8
SLC25A35
IVNS1ABP
LARP1
ADA
SEC23A
OSGIN2
HNRNPA1L2
DTX3
SP2
LRRC1
RPS8
MRPS33
DYNLL1
SRSF9
CCDC102A
PIM3
AKTIP
TRIM26
INPP5K
GRK6
SYS1
DKC1
ANAPC15
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
SMAGP
ADM
SLC22A4
SLC25A53
RPL34
KBTBD2
MRPS36
POLDIP3
ATP6V0E2
PRR3
GNL1
TBC1D8B
LRRC61
ACTR3C
B4GALT6
RNGTT
CEP78
ESR2
MCOLN1
CCDC71
CYP4F11
NFKBIA
LEO1
TP53INP1
TAOK3
ACBD3
CXCR4
WWTR1
HEXIM1
CNDP2
ZXDC
ZNF492
CAND1
ZNF446
HIC1
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
PRKD2
MAP4K5
ATL1
FSTL3
C12orf65
KCNS3
UFD1
CDC45
XRCC6
DESI1
MFSD11
SRSF2
TRAM1
PSMA3
C16orf70
DNAJA2
PAXBP1
FAM114A1
SEC61B
KMT5C
GBF1
IRF9
MYL12B
ENOX2
AXDND1
STK11
TMPRSS12
SUDS3
COX5A
PCBP2
NEK2
MT2A
NUDT17
SBNO1
PLBD2
CCDC120
CSTB
SCYL3
PCDH1
PRKACA
PEX2
BAG2
FZD4
BBS9
ST3GAL4
LMF1
CLK4
SOX8
DDX1
RBM7
C11orf71
MPZL2
TRAPPC6B
SMG5
PELI2
AASDH
SLC3A2
IRX3
TENT2
SLC38A1
THAP7
ZFP41
ZBTB44
ZNF563
OSBPL1A
DHX35
EPHA7
CALM2
ACADM
SRSF3
C2orf73
MRPL34
ABHD8
GOPC
RPS9
POLR2B
SIRT4
PLEKHG3
OSR1
LRRC59
MFSD8
ABHD18
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
NDUFA10
CASD1
CLDN7
RAB11FIP2
LOC391322
MADCAM1
SLC9C1
DSG2
ADRM1
SLC4A2
CDK5
AGPAT3
TOE1
MUTYH
SIKE1
DNAH12
DNAJB1
PRPSAP1
LAMTOR5
ZDHHC3
EXOSC7
TECR
SLC30A7
EXTL2
KRIT1
ANKIB1
CD320
ZNF76
MRM1
OSER1
NLRX1
CCDC9
PPP1R10
MRPS18B
TAF2
SYCP2L
ZNF891
ZNF10
SH2D3A
SNRPF
RNF168
CYB5A
DDX5
CEP95
ZNF69
LTBR
MAPT
DTNB
RPL23
WARS2
EFS
HUS1
DHCR7
UFSP1
SHPRH
WDR81
ENOSF1
LRRCC1
GPRIN2
GFM1
ZNF572
SYPL1
DYM
COP1
C2CD4D
PRELID3B
BLVRB
SPTBN4
ZNF484
CCDC130
AMER1
ZBTB45
NUP85
HNRNPLL
POLRMT
OBP2B
TXNRD1
ELP6
SEMA3E
CTNNA1
PNKD
SNX3
DCAF10
SRSF5
KLHL7
ADCK1
CCDC38
AMDHD1
EBAG9
COMMD3-BMI1
COMMD3
SLC25A6
TAF12
PPIL2
GSPT1
WDR43
MDH1B
FASTKD2
NIBAN2
TMEM209
PAK4
SRSF7
NOD1
CRY2
DENND6A
GXYLT1
CDK13
SIK3
ANKRD50
THUMPD3
CYB5R2
DDT
DDTL
MARVELD3
POLR3B
RUFY1
MDP1
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
ZNF675
RFLNB
GSE1
CTR9
ITGB3BP
EFCAB7
FOXJ3
MRPL36
GABPA
ATP5PF
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
EFTUD2
CCDC103
NVL
IPO13
VDAC2
DYNC1LI2
GOSR2
HSPA9
VTI1B
PSMG2
CEP76
NUP205
MRPS7
GGA3
POLR2E
HADHB
HADHA
RPL21
EXOSC5
BCKDHA
C19orf48
TBCK
AIMP1
BLCAP
DCTN1
REXO1
TSNAX
SLC35B1
ATP5MG
STAM
TSN
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PNO1
PAK1IP1
C6orf52
RBBP5
PES1
UPF2
SKP1
IRGQ
NDUFA4
ZNF576
COX7A2L
CAPRIN1
ISCU
ACTR10
ZRANB2
TTC8
SUPV3L1
DPH6
IQCG
SART3
GOLGA5
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
C17orf80
RABGGTB
SELENOF
HS2ST1
FAM104A
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
MED29
TM9SF1
NEUROG2
DDX39B
LRR1
NEUROG3
PIN4
OAZ3
SUCLG1
PTGES2
UBE2I
HES1
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
SPATC1L
VEZT
FGD6
RPL7
RDH10
SEC11C
EIF2S3
GADD45GIP1
BICRA
CDC73
PMAIP1
C16orf91
HOXA4
RPN1
GORAB
GTF3C4
DDX31
NEUROG1
ATOH1
CNPY2
BNIP3
ZNF383
IGFBP2
MRPL38
GLT8D1
PDHX
APIP
TTI2
PCBD2
HOXA2
ANKLE2
DNM2
TPRA1
NBAS
ID2
TEPSIN
NDUFAF8
P4HB
ALKBH5
RPS10-NUDT3
RPS10
TBX2
CLGN
ZFHX3
DOLPP1
RAB5B
CAMTA1
UPF3A
HSPA1B
NPAS4
ANK2
TLE4
ATF6
SP5
PDHB
CBFA2T2
KATNB1
PANK2
RBPJ
FRA10AC1
PGK1
PRUNE2
GATA4
MTMR4
DUSP6
ZNF687
XKR7
TBX3
ARRDC4
ARSG
NRL
KIF21B
SRSF11
QPRT
ST18
RFX1
LRRC40
HOXA3
STIP1
NR2F1
OSBP
TLE2
SPCS1
RMND5A
DCAF11
INSM1
ZNF608
PDE4D
PPCDC
PCNA
IQSEC3
ZFHX4
ATP5F1B
GPCPD1
CBX3
SLC45A4
RUNX1T1
PPP6R3
SP1
CS
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
EIF2AK3
HEXIM2
SNX16
KAZALD1
GRSF1
NELFA
CRLS1
GADD45G
TLE6
KNL1
HNRNPD
KCNAB2
POLG
TMEM70
MLEC
TNFRSF19
SHF
SACM1L
MYRIP
METTL11B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
CCDC43
SMG6
PRMT5
DAGLB
EIF3D
RBBP7
NLK
FBXO31
ANKRD28
ZNF503
SERPINE1
RAB37
RTN4
HNMT
EIF4H
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
HMGB1
ARHGEF10L
ILF2
CEP41
RHBDD1
CDS2
TDRKH
DIABLO
TMEM101
KIAA0319
EVI5L
NCOA2
TOP2A
ID1
SEC14L1
G3BP1
HTR5A
BFSP1
KMT2A
PRDM10
ARHGAP4
TRIB1
AIFM2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
DUSP9
NRSN2
IQGAP2
RNF149
GOT1
RASSF2
NEDD9
USPL1
SH3BP2
TMEM60
PHTF2
INAFM2
PIKFYVE
HES3
HMGCS1
CCDC88A
TUBGCP3
B4GAT1
FAM107B
CHD8
EIF1B
CPSF4L
NHLRC1
HNRNPA2B1
CMSS1
BHLHE40
YTHDF2
ANKS4B
STX16
LCK
TSPAN4
GFOD1
TCHP
POLR3E
PARK7
HPCAL1
NEO1
PRDM12
HSP90B1
PCGF1
ICAM1
ANP32E
MPND
SEPTIN9
DLC1
TUBB4B
UBE2C
MVD
POLR2J3
SLC25A19
BRWD1
MEPCE
HNRNPC
TRAF4
ATP23
TBL1X
MPV17L2
CELSR3
ADAP1
TANK
CASC3
LBX2
ARHGAP24
CCDC107
HSPE1-MOB4
HSPE1
HSPD1
CDC42EP3
PRR14
H4C12
GLRX5
TMEM94
HNRNPUL1
IRS1
DUSP12
ARNTL
YARS1
S100PBP
ZCWPW1
HOXB4
ZNF148
LPIN1
TCF4
ZCCHC3
STAT3
SHB
NCBP2AS2
NCBP2
ABHD2
TMPPE
GLB1
TCERG1
SLC9A1
ZBTB18
CSRNP1
KPNB1
CYCS
C8orf37
MTRF1L
JUP