ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9607665 | NTERA-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◣ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

H2AW
ZGPAT
ARFRP1
KIF21B
LMOD1
SKIL
MUC20
CYP26A1
MAMDC2
LFNG
GJB6
MINDY2
METTL11B
MAP3K6
MDM2
NR2F6
SH2B1
KCNF1
LEFTY2
GLI1
CYP1A1
OTP
CADPS
LINGO1
MACF1
CPLX1
SERPINB9
N4BP3
SOCS3
WFIKKN1
PKNOX2
AGO1
HECTD4
TAGLN2
FBXO41
USP3
JUNB
TMEM59L
CRLF1
FOXL2NB
FOXL2
PCTP
SNCG
MMRN2
LHX4
RPS8
HPD
PDE12
SPATA25
CTSA
NEURL2
BMF
ERCC1
C16orf70
NODAL
KCNQ4
MAPKAPK2
CPE
SPACA6
CLDN2
NUP210L
DLX5
ATP6V0A4
LZTFL1
EVPL
ITGB2
TLX2
FAM110D
NAPSA
KLF16
GATD3B
GATD3A
MAP11
KMT5C
TPRA1
PANK2
PLEKHA6
BRI3
VWA1
PCDH1
BIRC7
CCL26
CARD14
BTG2
KCNJ4
FSCN1
ADGRA2
HOXB1
TCTEX1D4
BTBD19
MACROH2A2
BABAM2
RBKS
DUSP4
CXCR5
SHISA5
MIDEAS
GPR35
LAPTM5
MEGF9
HPDL
SFXN3
PDZD7
LINGO4
SUSD3
ANTKMT
METRN
ZNF746
TLN1
CREB3
HAP1
CDX1
MMP11
CHCHD10
C22orf15
SERPINB6
CSRNP1
ARRB1
IGFBP5
TRAPPC3
MAP7D1
PAX7
MS4A4A
LDB3
TNC
PRELID3B
MUC3A
SOAT2
SSTR5
UTS2R
WDR18
HEY2
FOXK1
SIM2
MTF2
MYRF
DYSF
RD3
ZFHX3
SRCAP
LOC730183
MDK
RNF208
PRSS47
LOXL1
APOBEC3G
CCDC120
FBLN1
RARA
WDR81
SOX5
SETD1B
PSMG3
DIPK1B
HUS1
PMF1-BGLAP
PMF1
DPEP3
PDE6B
LTA
NDUFS7
MYEOV
AHDC1
TPPP3
TRIL
TLE6
WBP1L
DHDDS
PRKCZ
APOBEC3D
CRB2
HOXC4
CDC42EP2
TSPAN18
CFAP20DC
NRSN2
NBPF15
SHANK2
CDC25B
OTUD7B
SNX16
DNAH1
CASD1
TBX6
YPEL3
IGDCC3
LOC105376731
HIGD1A
SOCS2
GUCA2A
NR2C2
ADM
ATP6V0C
NFE2L1
FGFR1
NR2E1
LHCGR
TTYH2
SH3PXD2A
CRYBG2
LIF
TLE1
ACYP1
ZC2HC1C
CNR1
RCC1
RUNX1T1
BFSP1
SEC22B
SERPING1
DONSON
ENO2
CCDC33
SH3D21
KRT24
FAM166C
TMEM210
LRRC26
KDM6B
COX5A
PMEPA1
NR2C1
ANKRD23
NFE2
MYBPH
TRPV4
RNF103-CHMP3
RMND5A
AP5B1
FOXJ3
FOXE3
ETV4
ARL8A
DUS1L
SLC4A2
CDK5
PRR5
PRR5-ARHGAP8
SLC16A8
MGAT3
ATP5MC3
ZNF436
DEPP1
NES
SLC11A2
NAP1L4
GALP
SNX12
MRM1
CYBA
ATP5F1E
DUSP23
CAPN13
DHX32
CRIP2
UPF3A
PCNA
FAM72C
FAM72D
CDS2
PTGES3
PDGFA
MTRNR2L1
NAT8L
AKIRIN1
HEYL
HOXA1
NEFH
HRK
IL17RD
GBA
PALM2AKAP2
FAM20C
NUF2
KRTAP12-1
SEMA5B
SH3BP4
PTP4A2
AP1B1
EEA1
ZEB2
CNOT2
GABRB2
GPR162
KAT6B
BOLA3
LIN28A
CDCA7L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TCF7
SULT1A1
HTR6
MTRNR2L2
MSH3
DHFR
RIPOR3
WDR74
TECPR1
RIPOR1
KAT6A
ZSCAN10
CORO6
NFE2L3
L1TD1
RSPO1
STX18
UHRF1BP1L
DENND5B
GOLGA6D
TRABD
C1orf198
IFNLR1
NPAS2
SERTAD2
ADGRA1
TRIM48
KCNK6
YIF1B
ARID3B
SSBP4
CYSRT1
SHANK1
CLEC11A
C15orf39
NANOS3
NIPSNAP2
CLDN9
CXCL12
ZNF664-RFLNA
ZNF664
CCDC92
NAALAD2
MTRNR2L8
SCAP
GLIS2
ACY1
GPRC5A
TNP1
TNFRSF6B
MSI1
SOX4
MYL9
USP30
FNDC5
FOXP1
GPCPD1
UXS1
LY6E
CTSZ
DLC1
SAMD11
DNMT3L
NCBP2AS2
NCBP2
STRA6
ZNF202
DSTYK
ZNF385A
ZFHX4
ZBTB17
GDPD5
UFSP1
ACHE
PLAGL1
ECE1
LMF1
SOX8
POU4F1
TOP2B
RGPD1
RGPD2
TTYH3
ZBTB46
PHLDA3
CFAP74
DNAJB5
CRELD1
FXYD3
KANSL3
FER1L5
BCL9L
TBC1D9
HHIPL1
CCDC85C
LRMDA
RPH3A
RHOC
DUX4
DHRS3
BCAP31
ABCD1
ARPC1B
LPCAT3
RHOT2
RHBDL1
AIFM3
LRP4
PPP1R13B
RBBP5
TNFRSF19
MBD6
DDIT3
SLC30A4
ZNF827
LIMK1
EDN2
CTNNB1
SIPA1
EFNA1
SBNO2
MCPH1
SEPHS2
INTS10
IKZF4
PLPP2
ANHX
VOPP1
PFKL
EMP2
FLNC
FGR
ARHGEF16
SH3BP1
SV2A
FGF19
LPIN1
SF3A3
C5orf63
RFX4
ATP2A1
DBH
COL11A2
CDK18
MAPK12
ARID5A
SPSB3
NUBP2
RAB3IL1
S100A16
DYRK1B
CCDC88B
EPM2A
TRH
CACNA1H
TMEM132B
MAP6
TATDN3
NSL1
TNNC1
NISCH
RGSL1
PPP2R3A
SPIB
MAB21L4
RCOR2
KMT5A
PITPNM2
GFI1B
TSC1
FXYD4
DUSP9
PLIN2
ZDHHC1
ANP32A
TNRC18
PHLDB1
METTL24
ORMDL3
DCP1A
RASSF7
LMNTD2
SPN
HMX3
FZD7
EFCAB14
TSPAN14
PANK4
HES5
TTLL6
C1orf232
GALNT9
ZNF639
BAHCC1
SIAH1
DOK7
MACROH2A1
NOTCH2
ZNF792
MPP2
COLGALT1
SRP68
GALR2
SLPI
ZACN
PPP1R16B
POU5F1
EXTL1
MBD2
TTYH1
SNRK
ST18
DLL4
DCAF10
STRN
SQSTM1
DRG2
MYH11
C22orf39
PPP1R1A
RAD54L2
NR6A1
ZMIZ2
AGAP2
ABCB5
SORBS1
CACHD1
SKIDA1
ZNF615
SPIRE2
NEK2
ATP6V1B1
ADAMTS2
GAS2L1
RBM15
ADAMTSL4
PPM1H
M6PR
KLRG1
ZNF79
PDE2A
CLEC4C
KLF6
COQ10A
DUSP10
SUN2
RPRM
ADAR
SLC26A11
NRG1
ZNF44
C7orf33
PMAIP1
WDHD1
SOCS4
IL12RB1
SLC2A14
ANKDD1A
STK11
CRX
LMNA
BIN1
MEX3A
TMEM123
PLCB3
TRNP1
NYX
SZT2
MED8
TRIP10
ABHD12
MLF2
BACE2
LDLRAP1
LMX1B
CACNA1D
FXR1
CPA1
GLIPR2
UTS2B
CCDC50
FGF4
ASB2
MFSD8
ABHD18
TSPAN16
PCCA
GLI3
CYB5R2
TYR
SERPINE1
VANGL2
MTARC1
UNC5D
TAC4
THRA
VAMP8
DLX1
TAFA3
PPM1J
GPR108
SPIN1
IL24
DENND4B
MRPL39
ISCA1
LDB1
DCDC2B
TLE3
TBC1D22A
FAM210B
DNAJB1
BBC3
MYBL1
NANOG
RARB
SLC4A8
GALNT6
AP3B2
FRMD1
MIDN
SPAG8
HINT2
TRPM1
FAM120B
IDH1
DYRK3
RRP1
DLL1
NMRK2
C1R
FAM207A
TSPYL2
MCAM
GADD45G
PSMF1
LHX2
TCF20
AURKAIP1
RBM20
DDX3X
TARS2
PHB2
PTK7
PKM
DUSP12
TESMIN
CTSC
TBC1D19
NINJ2
TRIP4
PIANP
NFAT5
DSC2
CMSS1
NKX1-1
FILIP1L
SLC25A6
LCN15
XPR1
SEPTIN6
LCN8
FUT10
TBC1D8B
CHD4
SMIM5
FRG2C
SREBF1
GSN
KIF26A
MAN2C1
MED23
MAP2K7
NFIC
KIAA1522
TRAK1
DMPK
CNTFR
TRIAP1
ZSWIM8
CHCHD1
NFAM1
TRAPPC10
PLCH2
KIF13B
KIAA0930
TRMT2A
RANBP1
SHH
MUC1
FABP3
TCF7L1
FGF6
LAMA5
NECTIN4
TAGLN3
PLD2
TUBB2B
OTOP1
HOXA4
TEX264
MELTF
ZNF710
CDC34
REST
GXYLT2
MLLT6
MED9
HPN
VCAN
GOLGA6A
CLUAP1
PTP4A3
C16orf90
SESTD1
NCDN
KIAA0319L
NRCAM
PDE8A
UBAP1
OGFR
INPP5F
CACNG4
BHLHA15
SERPINF2
SNX8
CD99L2
NEUROG2
GTF3C3
CEND1
PEX5
TRAF2
ARHGAP40
STOML2
TRMT112
PRDX5
RIF1
RNF152
ABCC10
IBTK
EIF2D
TLX3
AOPEP
TTC4
SLC39A14
DUSP16
LRIG1
YTHDF2
AMOTL2
FIGNL1
KMT2D
MYL10
STRAP
HNRNPA2B1
CBX3
GCLC
PLK3
S100A5
ST3GAL2
S100A6
RBM38
NUBP1
SLC51B
GDF11
AEBP2
SFRP1
TMC5
CLK1
SNAPC5
SMPD1
FBXO32
IFI16
ZNF3
FASTKD1
AJUBA
USP7
POMGNT1
APOC4
APOC2
IL11RA
TMEM40
MUC12
MYCN
TFAP2A
NR2E3
INSM1
ANKRD28
CRIP1
TEDC1
PNPLA3
HSBP1L1
FRA10AC1
GPC6
FRAT2
WNT10B
SNRPA
C19orf54
TPM3
WNT1
TIMP3
RXRB
SLC39A7
BCKDK
HSD17B8
EFNA2
SNAP47
CD7
ARMC5
JMJD4
BICD1
FGFR3
AIF1L
VARS1
CCDC88A
MYADM
PGP
BRICD5
SEMA6D
ZSWIM4
KRTAP10-12
FAM72B
LZTS2
ALDH7A1
DLGAP4
RCVRN
GPRIN2
C8orf34
ENO1
TYROBP
TMEM242
PARL
HCST
STMN1
ACSF3
OLFML3
ESX1
CPSF4L
BRWD1
GIP
TAF6L
CYBC1
IQCC
CCDC28B
NCOA2
SLC39A3
DUS2
DDX28
SOX14
PNKD
COL9A2
ROCK2
CA14
TRIM54
RBPJ
QPRT
MRPS15
RCOR3
SLC25A36
ANKRD27
RGS9BP
GPATCH8
AK2
CCAR2
C8orf58
NUP107
MAD2L2
CRABP2
MPRIP
S100P
CEP131
FAM83E
C2orf73
CYP11A1
RPRML
RFX1
REPIN1
TRADD
FBXL8
HSF4
NFILZ
PGF
TSGA10IP
FAM178B
FAM83F
IST1
SLC16A5
BIRC6
PGM2
ECSIT
CD244
ZBTB7B
VAMP2
PELATON
GSG1L
P2RX6
CLDN7
USE1
LINS1
ASB7
ZNF677
VN1R2
ARID2
ZNF346
ADIPOR2
CDH15
SNRPN
KLK7
SLC7A5
SNUPN
DMAP1
RNF220
ACTR6
NMNAT3
ECM1
PRDM14
PLVAP
PACSIN2
PEX3
ADAT2
PICALM
CSRNP3
PYGM
LAMC1
ASS1
PLAAT3
MSX1
METTL25
CCDC59
TMEM222
ZNF341
CTDSP2
U2SURP
FAM3A
CLIC5
DSCAML1
LTBR
CPT1A
FAM72A
IGF2BP3
SCNN1A
MRPL20
TJP3
USP24
KCTD3
SORBS3
PALD1
RBP1
MAGEB3
LAMC3
MCRIP2
RSBN1L
PACS2
BRF1
MED12L
SDHC
GLB1L3
TBL3
PTMA
RBM15B
ITIH4
MUSTN1
RGPD8
RGPD5
RGPD6
TUT4
GADD45A
HMGB1
USPL1
BARHL1
MID1IP1
CIAO3
ZNF512B
DEDD
CPT1B
CHKB
PPP1R3E
IQUB
BCL2L2-PABPN1
BCL2L2
PLCB2
TRIP12
FBXO36
YAP1
GADD45B
TNS3
TMEM11
SEZ6
SPEG
FIGNL2
DBF4B
NPM2
KREMEN1
PHACTR1
SLC24A1
TNFRSF12A
MEGF8
THOC6
HCFC1R1
CLDN6
GRIFIN
PCBP3
KCNB1
NCAM1
ZNF141
YJEFN3
B4GALNT1
PCGF2
PSMB3
TXNDC11