ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584303 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◣ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
IPO13
MAPKAPK5
NME6
POLR3F
DZANK1
CACTIN
TAOK3
SUDS3
ZP4
PSMG2
CEP76
NUP85
VDAC2
FAM187A
EFTUD2
CCDC103
GRSF1
HSPA9
NVL
DYNC1LI2
ZNF503
SP5
POLR2E
C19orf48
RPL21
PMAIP1
ATP5MG
REXO1
STAM
STAM2
TBCK
AIMP1
TSN
VTI1B
GOSR2
NUP205
LEFTY2
MRPS7
GGA3
EXOSC5
BCKDHA
CAPRIN1
DCTN1
SEC61B
NDUFA4
BLCAP
PES1
PAK1IP1
C6orf52
UPF2
PNO1
ZNF576
IRGQ
NCLN
SKP1
NEUROG2
FARSB
SLC35B1
RBBP5
ACTR10
TSNAX
DPH6
GOLGA5
ARHGAP10
SRD5A1
NSUN2
SELENOF
HS2ST1
HADHB
HADHA
UBE2I
LYRM4
FARS2
TMED1
RPS12
PROSER1
NHLRC3
BABAM2
RBKS
PHOX2B
TTC8
VARS1
ICE1
PSMD12
PCBP1
MRPL11
RPS23
ATP6AP1L
SMC2
MRPS5
SPECC1
USP1
COX7A2L
ANAPC7
ZRANB2
FAM104A
C17orf80
SART3
ISCU
EIF4ENIF1
PI4KB
HES3
IQCG
RPL35A
SUPV3L1
RABGGTB
ADK
AP3M1
PDAP1
BUD31
UFM1
PAF1
MED29
CNTN1
APOM
BAG6
MUC12
PRSS56
TM9SF1
SF3B3
COG4
PAX6
XPNPEP3
ST13
NKD1
PTGES2
PRRX1
OSGEP
APEX1
COMMD1
CCT4
PIN4
FRG2C
PDZD2
DUX4
RPS27A
CLHC1
NFKBIL1
DDX39B
ATP6V1G2
STK36
RNF25
LZTS1
GRIP1
NEUROG1
NEUROG3
BICRA
RPS29
LRR1
TCF7L2
MSX1
OR6B2
NDUFA10
SUCLG1
EOLA2
IGFBP2
OR2L13
OR2AJ1
EIF2S3
SMC6
GEN1
ANKLE2
KLF17
TAF9
RAD17
AK6
RXRB
SLC39A7
HSD17B8
OAZ3
PDE6B
ZSWIM6
SLAMF8
TLE6
PDHX
APIP
SEC11C
OTX1
ARHGAP11A-SCG5
ARHGAP11A
CDX2
HOXA4
RPL7
RDH10
KLHL25
GADD45GIP1
CPSF4L
GPR78
ATOH1
GADD45G
CDC73
MRTO4
EMC1
CR1L
PCBD2
BNIP3
PDPN
MSX2
GORAB
GTF3C4
DDX31
HOXB3
HOXB4
CDX1
HES1
RPN1
CNPY2
HAO1
TMPPE
GLB1
ST18
KDM2B
METTL11B
WBP1L
RBBP7
PNKD
CSRNP1
DMBX1
ZNF383
FZD8
TRABD2B
SMPD1
AXDND1
STK38
SKIL
PRUNE2
SRCIN1
TLE3
FGF2
ALKBH5
MALRD1
TSHZ1
ZADH2
ZGPAT
ARFRP1
CCDC33
CACNA1D
SP7
LZTFL1
GAD2
CDH12
ALDH1A2
TTYH1
SRGAP2C
SRGAP2B
PALM2AKAP2
MMP3
HOXA3
EBP
CTXN3
SP8
SNCG
MMRN2
FGFR2
MRPL38
MYRIP
HES7
LIG3
HOXD3
LRATD2
ONECUT2
PDHB
MESP1
CLGN
SYBU
SULF1
HECTD3
HSPA1B
NKX2-2
SRSF11
LRRC40
MEIS2
ABLIM3
ADGRL2
YWHAB
NR6A1
TKT
GIMAP5
FRG2
LY6G6D
NEBL
MYBPH
C1QL3
CDC42EP2
RNF32
PBX3
CCDC200
PDE12
PAX4
TTLL6
VEZT
FGD6
DLL4
EIF4H
CHN2
CPVL
LRRC8C
FMOD
SPCS1
GLT8D1
FAM72C
FAM72D
APBA1
TBX3
HOXB8
CLDN9
GUK1
SNX1
CIAO2A
FAM3C
C11orf95
SOST
SLITRK5
ZDHHC1
NUP210
PCBP4
B4GALT5
SUSD6
DGKZ
HERPUD1
TLE2
MEIS3
LYPD6B
FAM107B
FBXW11
FOXD1
MYLK4
TBC1D8
TMEM123
NELFA
HHIP
TMEM131L
KDM8
H3C12
H2BC17
H2AC17
DKK1
OTX2
HOXD1
CNTN4
ULBP3
RPS24
POLR3A
BNIP2
ITPRIP
IPO8
TK1
AFMID
HOXA9
HOXA7
ARSI
GCNT2
EML4
HAS2
CCN1
ENO1
RASL10B
SH3D19
TRAP1
RABL3
GTF2E1
PTGES3
MYORG
C9orf24
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UQCC2
CS
LIN28B
YAP1
CMTR1
LINGO1
ZNF471
HOXC4
PAX2
PKNOX2
OR52E2
CCDC43
EYA1
CFAP410
COQ3
KLF6
RPH3A
RPS10-NUDT3
RPS10
GATA3
PAPPA
AGO1
TCHP
MAB21L2
PPM1B
RARA
DAPL1
TPM1
CUEDC1
HOXB7
CHD8
RNF138
SEPHS1
CCDC85A
WDR74
PANK2
TPRA1
ARHGAP24
AXIN2
LIMCH1
RGSL1
TMEM70
ELOC
TPCN2
PROX1
ZNF746
INSM1
TMEM120B
EPHA5
NEUROD1
JCAD
KCNJ5
KIAA1522
ITIH4
MUSTN1
MAPK8
CCDC169-SOHLH2
CCDC169
HOXB1
NABP1
ADAMTS15
DSCAML1
HEBP1
FGF19
CDK5R1
GYPC
SERTAD3
ABCB5
ZFHX3
QPRT
FBXO46
MEIOSIN
PCDH18
LRGUK
VAMP5
VAMP8
HOXA1
LIN28A
WASHC3
MPZL2
CYP26A1
MTCH2
NPEPL1
ZNF341
KRTAP3-1
CRYM
KCNN2
RSPO4
CLDN2
FAM162A
CCDC58
ASIP
THEG
SPDYA
USP17L20
USP17L22
SHMT2
NFE2
PLAGL1
SLC7A5
SREBF1
SYT7
SLC35E3
EVPL
CBX4
USP17L15
ID2
COL11A2
BBS9
FOXP2
CYP51A1
EIF2S1
ATP6V1D
ADM
CCDC114
EMP3
DTNB
KDM3A
LRRC10B
RUNX1T1
CLDN3
SH2B1
MCC
TOMM34
STK4
ID3
OAS1
LSM14B
TRDMT1
GABRR1
NUTM2D
MSI2
BRINP1
ADAM18
TESC
IRS2
ACSM6
SOX12
LRAT
CERS6
DRD2
DST
ABCA5
PAX3
LIMS1
KDM6B
TBC1D10A
SALL4
KAT6B
CD36
ZGRF1
LARP7
TMEM107
MBNL3
CD99L2
RARB
OCLN
ZMAT4
KIRREL2
NRARP
METTL24
PKD1
XIAP
VENTX
MRPL34
ABHD8
DDA1
PEPD
PAX8
CYREN
NEDD9
PACSIN2
TCF20
GAS2L1
SALL1
ANO4
ERCC1
DCTN3
ARID3C
KMT2A
FAM72B
MPP4
ANK2
RASL11B
BAZ2B
HHIPL2
CATSPERG
TBL1XR1
SLC10A2
MAP1A
ELF1
WBP4
ABHD11
CENPBD1
DHX32
ASS1
PPFIBP2
SIPA1
REC8
PTGR1
LPIN1
RCOR3
GBX2
STARD4
CEMP1
OR8J1
PDPK1
CSNK2A2
RPRM
PRICKLE1
MRGPRE
ARID5B
SIK1B
SIK1
CDK15
PHC2
FTL
KRT20
TLE4
SERPING1
GOLGA6L4
NPAS4
H4C6
CSTF2T
TLE1
PAH
ASCL1
ERRFI1
HOXC6
HOXC5
HRK
C3orf52
TFDP2
STX3
HOXA6
BTRC
ZFHX4
SOCS3
BRWD1
RBM20
CER1
ECM2
ZNF76
AHDC1
DEFB106B
DEFB106A
ZCWPW1
MEPCE
MSGN1
PRTG
POLR1D
LNX2
PLEKHA5
RNF38
MVB12A
SPRY4
EPHA1
GXYLT2
PRTFDC1
MGST1
DLL3
CEP97
PRDX6
WNT5B
MNX1
ZNF474
RCN1
CTBP2
SPATA25
CTSA
NEURL2
ERLIN2
TAGLN3
TLN1
CREB3
PLEKHA6
PEX14
DFFA
REST
RBFOX2
DDX46
DMAP1
NFIX
GNAI2
RFFL
ADAMTS19
BAK1
SLC39A8
KRTAP4-12
GLI1
NAV1
STRADA
KLHL15
SPIN1
IFI16
OTUD7B
CASC3
BCAT2
DUSP4
KSR1
DUSP12
LHX2
SOX6
NDUFS7
GPX3
TPST2
DRAP1
C11orf68
ZBTB45
ARHGEF38
ATXN7
PCF11
STRA6
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SOAT2
IGFBP6
SPATC1L
ARID3B
MAMDC2
IER3
FLOT1
C16orf91
DHRS3
DPP9
SP2
SEC22B
LBX1
TRIP10
GPR108
DNAJB7
TTI2
H2AW
HOXA2
DUSP6
CDCA7L
ASB2
TEPSIN
NDUFAF8
DNM2
PCGF1
LBX2
NBAS
FOXP1
COL23A1
TBX2
P4HB
MLEC
FBXO31
HPD
MINDY2
ANKRD28
SMAD3
SYNPO
DLX4
HUS1
CAMTA1
TNFRSF19
ARHGEF28
PDE4D
KIF21B
DOLPP1
STX18
RAB5B
KANSL3
FER1L5
ARRDC4
PGK1
DONSON
UPF3A
XKR7
ATF6
CBFA2T2
SMPDL3A
KATNB1
RBPJ
PPP6R3
TRIB1
FRA10AC1
CCDC174
BAIAP2
SNX16
SQSTM1
TMEM101
CLCN3
ABHD2
BCL3
POP5
GPCPD1
PDZRN3
NINJ2
SMARCD2
GATA4
SIRT4
RARG
MFSD10
MTMR4
NR2F1
ABCC10
TOP2A
ID1
KCNAB2
ZNF687
ZNF718
ZNF595
ZNF367
SACM1L
PCGF2
NBPF1
ARSG
CCNL2
NRL
MUC3A
MRPS31
PSPN
ALKBH7
SMG6
CNOT2
DYNLT1
HEXIM2
MIDEAS
FURIN
RFX1
ITGAV
ADAP1
POLDIP3
NUBP1
NFKBIA
PKDCC
STIP1
OSBP
EIF2AK3
PSMB3
ZFAND2A
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
ZNF608
PPCDC
KNL1
PCNA
IQSEC3
PSMD6
SOD2
ATP5F1B
TRIM41
RNF207
PXYLP1
NR2F6
HNRNPA2B1
CBX3
KAZALD1
MDM2
SLC45A4
KMT5A
LPCAT3
HMGCS1
JUP
CSF3R
RHBDD1
NLK
SMIM20
POLG
SP1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
PRDM10
NCOA2
GPC6
RAB11B
G3BP1
SEPTIN9
B4GAT1
GLRX5
MACROH2A1
EVA1A
DLC1
CRLS1
CCL26
MBD6
DDIT3
TPCN1
RGS12
TRAF7
HNRNPD
CITED2
SHF
TMEM94
SPG7
GADD45A
TRIM46
PLEKHG2
MIDN
DLG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
FST
PKN2
PRMT5
ANTKMT
DAGLB
RGS3
BFSP1
EIF3D
INAVA
ACYP1
SSBP4
LCK
FAM167B
NEK3
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZBTB18
ARID2
ZFP36
SLC30A4
PLEC
ARAP1
CBX5
STX1A
ABCA4
COX5A
SH3YL1
ACP1
MRPS28
ATP6V1E2
ANKMY1
SERPINE1
RAB37
GMEB2
FRMD3
UGP2
LTBR
HNMT
HMGB1
CNKSR3
ARID5A
ARHGAP4
CAPNS2
BRMS1
EVI5L
KIAA0319
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
CEP41
DNAJB3
LAPTM5
CIC
CDS2
PRKACA
TDRKH
MBD2
SYNJ2
DIABLO
CMSS1
LNPEP
LIMA1
TXNRD1
RAC1
BAHCC1
PHETA1
LFNG
ARID4A
INAFM2
TXNDC11
GTF3A
LUC7L2
ZNF414
FAM72A
SEC14L1
SYTL3
HTR5A
KCTD7
IKBKB
WTAP
UBE2F
ARL8A
ROGDI
TUBB4B
CXCR4
MT2A
CERK
ANKRD1
AIFM2
COMTD1
IQGAP2
SLC35A3
TCTEX1D4
BTBD19
SORBS2
TIGD1
EIF4E2
LRP5L
INSM2
IL6R
USP42
DUSP9
NRM
C12orf73
NRSN2
TUBGCP3
CFL1
GSTP1