ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◣ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
ZNF503
TAOK3
SUDS3
IPO13
PSMG2
CEP76
POLR3F
DZANK1
CACTIN
VTI1B
FRG2C
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
POLR2E
RPL21
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
BBS9
GOSR2
VARS1
MRPS5
ZNF576
IRGQ
RARB
DUX4
UPF2
TSN
PSMD12
PAK1IP1
C6orf52
PDE6B
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
DAPL1
C19orf48
CAPRIN1
EIF4ENIF1
IQCG
RPL35A
SMC2
SEC61B
PES1
TTC8
BABAM2
RBKS
SOAT2
IGFBP6
PI4KB
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
RBBP5
SUPV3L1
PNO1
ACTR10
TMED1
NDUFA4
USP1
ZRANB2
LYPD1
SART3
ISCU
PKDCC
RBPJ
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
MOBP
XPNPEP3
ST13
SLC22A2
UFM1
ZFHX3
RPS27A
CLHC1
FRG2
PROSER1
NHLRC3
MRPL11
SYBU
PCBP1
CLGN
CBX4
LTBR
SCNN1A
PTK2B
C12orf29
RPS12
ZGPAT
ARFRP1
ZNF608
LRRN4
NEO1
CDC42EP3
CYP26A1
CREB5
METTL24
SF3B3
COG4
PAF1
MED29
NSUN6
ARL5B
FOXP2
PXDNL
PDE12
TLE2
PTGES2
BARHL2
VANGL2
NR2F1
HEXIM2
HMGCS2
RBMS3
CITED2
APOM
BAG6
GATA4
GABRB2
MRTO4
EMC1
MYRIP
HEY2
SIRT4
GADD45GIP1
MBD2
OR6B2
NDUFA10
EIF2S3
SCMH1
ACOT2
MTRNR2L1
ST7
MSX2
SLC30A4
HBB
RPS29
LRR1
SUCLG1
CCDC200
BANP
ZNF383
DIAPH3
ZNF746
POP5
HES1
ARHGEF10L
LAMA3
ARHGEF38
CDC73
CABIN1
SKIL
SEMA3E
ST18
HMX2
TNK2
RPL7
RDH10
NFKBIL1
DDX39B
ATP6V1G2
DMBX1
BNIP3
TMEM107
TPM1
LAMB1
HOXC4
HOXC6
HOXA3
CACYBP
PDHX
APIP
KAT6B
LIN28A
MEOX1
RARA
FREM2
SEC11C
TBX2
ZBTB25
ZBTB1
TXNRD1
ANK3
TBC1D9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
ZNF407
GORAB
PIN4
PCBD2
OAZ3
HOXA1
ZFHX4
FMN1
SMAGP
FOXP1
SERTAD2
MET
TTI2
PCDH15
CDS1
MGP
RPP25
PRUNE2
CNPY2
MKRN2OS
MKRN2
GTF3C4
DDX31
TMC7
GTDC1
ARAP2
CCDC33
EPM2A
ITGB8
SPCS1
GLT8D1
USP44
ALKBH5
IL20
ZNF367
NDUFB3
FAM126B
CNR1
FRRS1
SHOX2
RSRC1
CXXC4
ATOH1
TRIP10
GPR108
PDZRN3
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
SCML4
SHMT2
TAF9
RAD17
AK6
ETFBKMT
RPN1
LYPD6B
ANTKMT
METRN
GFRA1
TNFRSF19
AGO1
ZNF395
C6orf163
NLGN1
ABCB4
METTL25
CCDC59
MYZAP
GCOM1
KDM3A
PDE4DIP
OTUD7B
INKA2
SPAG17
RBM20
RARG
ASXL3
WDR74
DONSON
HOXB1
DHRS3
TIGD1
EIF4E2
TMEM70
ELOC
CLNK
SCAMP2
SPIN1
BNIP2
GEMIN2
ZNF341
KDM2B
TMEM106B
PRTG
SALL3
COL23A1
ID1
KRTAP23-1
SLITRK6
ZASP
SAP25
MRPL34
ABHD8
HOXA4
EIF3D
ACKR3
B3GNT5
MAPRE1
MEIS2
SNCG
MMRN2
ABLIM3
POGLUT3
PKIG
TFAP2B
NDST3
SLC25A53
RUNX1T1
DENR
SOX14
CFAP69
SCOC
STK36
RNF25
PEX14
DFFA
RPS24
POLR3A
PRDM10
KMT2A
TMPRSS11F
LIX1
MCU
REC8
RABGAP1L
SLAMF8
ARSF
GGA1
UNC93A
CTF1
BCL7C
ELOVL6
ATXN2
SLC25A6
ACOT1
ITGAV
SEMA6D
LMO1
NEFH
UBE2I
REL
RNF207
BRWD1
SEPTIN2
HDLBP
IPMK
CISD1
COX5A
IGF2BP3
OSGIN2
BCAT2
NELFA
KAT6A
FGD3
SFRP2
KLRC3
USP34
RGS8
APLN
C16orf91
NXPH4
TCF7
EOMES
PRKD1
STATH
KDM6B
ADM
ZNF827
SHB
LYPD6
GJA10
DCTN3
ARID3C
H2BC5
H1-4
CLDN9
TSPAN3
IL17B
CALM2
C1orf105
MIGA1
ZNF385B
VPS33B
ABI2
AFAP1
LOC389199
AP3D1
HUS1
YTHDF2
ADAMTSL4
SRSF11
LRRC40
LYN
CBWD5
TSHZ1
CBWD3
CRABP2
SMARCD2
MYADM
SVOPL
SIGLEC15
TRPM7
IGFBP2
PDHB
EBAG9
DNMBP
RBBP8NL
SPATC1L
SNX1
CIAO2A
KCNK2
HAPLN1
TPRA1
KRT8
KRT18
ILF3
CCDC174
PHIP
ZNF507
CS
ACYP1
ZC2HC1C
IMMP1L
ELP4
PDE4D
SLC7A7
BICDL2
PDCL3
LOC100287896
LIPT2
PXMP2
POLE
STX19
KANSL3
FER1L5
ATXN1L
ACY3
TACC1
ATXN7
PCLO
IFI16
SSBP2
BEND7
HSPA4L
CLCN3
OTUD4
ZBTB17
SYNJ2BP-COX16
SYNJ2BP
COQ5
RYR2
DUSP9
LMO4
UXS1
UFSP1
DMAC1
ACHE
SATB2
EIF4H
TMTC3
CEP290
TBX3
GADD45A
KCNC3
MGST1
CCN1
NR2C2
TANC2
HNRNPD
KANK1
ZDHHC17
ACBD6
RILPL1
ACTR3B
USP17L20
USP17L22
PRR13
CDKL2
FANCL
FAM168B
POU2F1
RPRM
TMSB4Y
TMPRSS12
SH2B1
HNRNPA2B1
CBX3
MTF2
UROS
BCCIP
VEPH1
CEP70
PRKAG2
FGD5
SLC40A1
TLE4
CYP51A1
TCHP
ESRRG
DLAT
NEUROG1
POLR2J3
ARSB
KCNH1
SORBS2
GTF2IRD2
LSM8
NRDE2
ZNF844
NCBP3
IMPA1
YEATS2
FZD8
CNN2
KLHL32
MELTF
KCNS3
CBWD6
CNOT10
SELENOS
PTGES3
TMPPE
GLB1
MEMO1
EML5
BCAS2
JAK1
RASSF6
GPRC5A
GOLIM4
CCNC
TCF4
BAG2
MTMR10
RTL6
TAF1A
C2CD5
PALLD
PCTP
PEX2
PRXL2A
KCNN2
GGH
PYDC5
STX18
MTMR2
CHD7
MPP5
EYA1
DIO2
CCDC102A
HMGA1
UBE2V2
PXYLP1
SNX3
ZBED9
EID2
GPR37
SPECC1
SPRR2F
EPHA6
ID3
ATXN7L2
PIP4K2B
RTN4IP1
QRSL1
NEUROG2
FOXJ3
SLC5A10
SULF1
USP12
CMSS1
FILIP1L
PLIN2
IFT22
BAMBI
FAM110A
COLEC12
PLEKHD1
NEK3
C6orf136
RAB11FIP2
CMTR1
ZNF384
ARHGEF5
CFAP46
TPCN1
CATSPERG
USP17L11
USP17L21
USP17L12
USP17L18
CAPZA2
TBC1D5
PLS1
BCAP29
RYBP
EFCAB2
OTOL1
LUZP2
FAM162A
CCDC58
ARL14EP
TTK
PHACTR2
SPP1
EXPH5
SCAP
VWA8
LRRTM4
PELI2
SBF2
ZSCAN12
RAI14
PPP1R13B
TXNDC11
SEMA4B
KMT5C
RPS3A
NTAN1
DRAM1
NUTM2E
EIF5
MRPS36
ERCC6L2
PIGU
WDR11
FDFT1
REV1
OR5A2
CEP41
RHOBTB1
HEBP2
FSTL3
PIK3R1
MANEA
SKAP2
ADH1C
ADAMTS7
C15orf61
SLC48A1
SMARCAD1
NR2C1
FNDC3A
CRKL
MGST2
ANKRD36C
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
MTRNR2L2
MSH3
DHFR
HES3
MTRNR2L8
CDX2
VEZT
FGD6
ARID3B
MAMDC2
BICRA
NFE2
PMAIP1
IER3
FLOT1
ARHGAP10
ZP4
NEUROD1
DPP9
SP2
SEC22B
ERCC1
LEFTY2
SPATA25
CTSA
LBX1
MRPL38
DNAJB7
TLE3
PHOX2B
NEURL2
H2AW
DUSP6
INSM1
CDCA7L
ASB2
TEPSIN
NDUFAF8
ERRFI1
FGF19
ADAM18
ANKLE2
DNM2
PCGF1
LBX2
NBAS
HOXB3
P4HB
MLEC
FBXO31
HPD
MINDY2
DLL4
ANKRD28
SP5
AXDND1
SMAD3
SYNPO
DLX4
LPIN1
NPAS4
CAMTA1
ARHGEF28
KIF21B
DOLPP1
TLE1
RAB5B
ARRDC4
RXRB
ANK2
PGK1
TMEM120B
UPF3A
PHC2
XKR7
HSPA1B
ATF6
SLC39A7
MSX1
PRRX1
CBFA2T2
SMPDL3A
KATNB1
PPP6R3
LZTS1
PANK2
TRIB1
FRA10AC1
MYLK4
BAIAP2
SNX16
SQSTM1
TMEM101
ABHD2
BCL3
GPCPD1
NINJ2
MFSD10
MTMR4
ABCC10
TOP2A
KCNAB2
ZNF687
ZNF718
ZNF595
SACM1L
PCGF2
NBPF1
ARSG
CCNL2
NRL
MUC3A
MRPS31
QPRT
PSPN
ALKBH7
SMG6
CNOT2
DYNLT1
MIDEAS
FURIN
RFX1
ADAP1
POLDIP3
NUBP1
NFKBIA
STIP1
CNTN1
OSBP
EIF2AK3
PSMB3
ZFAND2A
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
LRATD2
PPCDC
KNL1
PCNA
IQSEC3
GADD45G
PSMD6
SOD2
ATP5F1B
TRIM41
NR2F6
AHDC1
RBBP7
KAZALD1
MDM2
SLC45A4
KMT5A
LPCAT3
HMGCS1
KDM8
JUP
CSF3R
RHBDD1
NLK
SMIM20
POLG
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
NCOA2
GPC6
RAB11B
G3BP1
SEPTIN9
B4GAT1
LIG3
GLRX5
MACROH2A1
EVA1A
GRSF1
DSCAML1
DLC1
CRLS1
CCL26
MBD6
DDIT3
SLC7A5
RBFOX2
TLE6
FAM107B
RGS12
TRAF7
ARHGAP24
SREBF1
DDA1
FAM72C
SHF
TMEM94
SPG7
TRIM46
PLEKHG2
METTL11B
MIDN
DLG2
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FST
PKN2
CCDC43
PRMT5
DAGLB
RGS3
BFSP1
INAVA
SSBP4
LCK
FAM167B
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZBTB18
ARID2
ZFP36
PLEC
ARAP1
CBX5
STX1A
ABCA4
TLN1
CREB3
H3C12
H2BC17
H2AC17
SH3YL1
ACP1
MRPS28
ATP6V1E2
ANKMY1
SERPINE1
RAB37
TCF7L2
GMEB2
FRMD3
UGP2
HNMT
HMGB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
CNKSR3
ARID5A
ARHGAP4
CAPNS2
BRMS1
TRDMT1
EVI5L
KIAA0319
CPT1A
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
DNAJB3
LAPTM5
CIC
FAM72D
CDS2
PRKACA
TDRKH
SYNJ2
DIABLO
LNPEP
CACNA1D
CSRNP1
LIMA1
PLAGL1
HOXC5
RAC1
BAHCC1
PHETA1
LFNG
ARID4A
INAFM2
GTF3A