ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
MRPS28
ING1
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
BABAM2
RBKS
CNOT2
POLD2
ZBTB7C
RARG
GATD3B
GATD3A
SMARCD2
KANSL3
FER1L5
NFE2
MAMDC2
ZCCHC24
ZNF827
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
MRGBP
HORMAD1
DONSON
METTL3
TUBB
FTL
MTRNR2L2
MSH3
DHFR
RAE1
IER3
FLOT1
DYNLT1
SYTL3
ZFP36L1
ZGPAT
ARFRP1
CAPN1
KDM3A
WDR74
CCDC174
NANP
MBD2
LOC114841035
FKBP2
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
PDE6B
RASA4B
EIF5
MAML3
TRIP10
GPR108
KDM6B
CTF1
BCL7C
NR2C1
NUDT15
UQCR11
USP42
BACE2
MTRNR2L1
SKIDA1
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK10
PTGES3
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
CLCN3
TMEM241
STAT2
APOF
BCL9L
ARHGEF35
PMPCB
ARHGEF5
MIGA1
DUS1L
DNAJC16
CASP9
RNASE4
ANG
CYB5R4
SNRPA
C19orf54
AZGP1
KRT15
ATP6V0B
DPH2
B4GALT2
PLEKHA8
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
COL23A1
NCOA7
TRABD
MED9
TEX264
RPL37
USP37
CNOT9
PDCL
NAGLU
CBR4
SMIM20
UQCRC2
FXYD3
RNF207
SREBF1
ABHD11
FAM78B
NCLN
FRG2C
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
ATF6B
DRG1
SZT2
MED8
SERTAD2
LOC105378979
GMNN
PSMB4
SOAT2
IGFBP6
CDC42SE2
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
TRIM48
ZSWIM8
CHCHD1
TECPR1
MELTF
GCN1
SENP8
MYO9A
ST8SIA6
NPNT
MINDY3
SH3YL1
ACP1
RNF220
RGPD1
RGPD2
SPATA25
CTSA
NEURL2
AARS2
MRPL54
APBA3
ABCC10
CAPNS1
TP53INP2
APOM
BAG6
SH2B1
ADAM17
ABHD3
NFIC
PARP9
DTX3L
PLA2G6
MTRNR2L9
AFF1
HBP1
COL27A1
SLC11A2
ROGDI
C12orf73
RPS3A
TNPO3
TDRD3
CCL28
SOD2
WTAP
MYADM
GDPGP1
CIB1
KLHDC2
RPL5
FDXACB1
C11orf1
TRIB1
SIPA1
MRPS16
DNAJC27
ATXN2
MKRN3
SCNM1
LYSMD1
PCCA
RIMS1
GPAA1
EXOSC4
TTK
SERPINI1
PDCD10
KRI1
CDKN2D
PCTP
SEMA4G
RPS19
DBP
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ENTPD5
BBOF1
FGF13
ZNF133
VARS1
NAA40
DCPS
TLR5
BRD2
NOTCH1
CDH11
TF
FABP5
MBD6
DDIT3
CGGBP1
C3orf38
ADH1C
SRPX2
PACSIN2
ACYP1
ZC2HC1C
CDC42EP1
CCDC200
RBM19
PCGF2
MUC3A
PSMB3
SULF2
SLC30A4
CEP70
SRCAP
LOC730183
TRIM17
SLC30A3
DNAJC5G
TRIM54
MINDY2
PTEN
KLLN
UBE2V2
SLC39A9
ERH
TAF6L
ARIH2
DHRS3
MDM2
SEC24C
ARID4A
DZIP3
CIP2A
ZNF746
CLK2
DUSP4
HDAC9
BCO2
ZASP
SAP25
LCN2
ZNF384
KAT6B
ZNF77
AP1B1
TRIM38
TMED10
ETFRF1
CFAP94
TMED5
CCDC18
NEPRO
SKIV2L
NELFE
ESRP1
DUX4
ABHD14B
ABHD14A-ACY1
ABHD14A
AP2M1
PRUNE1
MINDY1
CD46
ACSS3
STAM2
SNX12
KLHL24
TBC1D22A
SMPD2
PPIL6
KCNQ4
FDX1
KLF5
OTUD5
MIEN1
ANXA7
PSPN
ALKBH7
DPP9
URGCP
URGCP-MRPS24
IFT22
POMP
DNAH14
MACROH2A1
ZNF85
ERCC1
SCAP
ZNF318
DLG2
GBA
LEKR1
IGSF10
ECH1
SPATS1
LSM8
HGH1
ODF3L2
LETMD1
TXNDC11
SPAG16
GPATCH8
SLC25A35
IVNS1ABP
LARP1
ADA
SEC23A
OSGIN2
HNRNPA1L2
ARHGEF25
DTX3
SP2
LRRC1
RPS8
MRPS33
DYNLL1
SRSF9
CCDC102A
MAMSTR
PIM3
ZBTB20
AKTIP
TRIM26
INPP5K
GRK6
SNRNP35
SYS1
DKC1
ANAPC15
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SMAGP
ADM
SLC22A4
SLC25A53
RPL34
KBTBD2
KCTD9
CDCA2
MRPS36
POLDIP3
ATP6V0E2
PRR3
GNL1
RAB3GAP2
TBC1D8B
LRRC61
ACTR3C
B4GALT6
EPN1
RNGTT
CDHR2
CEP78
PHGDH
ESR2
CS
MCOLN1
CCDC71
CYP4F11
NFKBIA
LEO1
TP53INP1
TAOK3
SUDS3
TJP3
ACBD3
CXCR4
ZMIZ2
WWTR1
HEXIM1
CNDP2
ZXDC
ZNF492
CAND1
ZNF446
CLIP1
HIC1
ELOVL4
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
FSTL3
TRIM2
PRKD2
CSTA
MAP4K5
ATL1
C12orf65
NR6A1
KCNS3
OPTC
UFD1
CDC45
XRCC6
DESI1
SRSF2
MFSD11
TRAM1
PSMA3
C16orf70
QSER1
DNAJA2
KRT14
PAXBP1
FAM114A1
SEC61B
KMT5C
PITX3
GBF1
TMEM167B
LOXL4
IRF9
MYL12B
ENOX2
AXDND1
STK11
TMPRSS12
COX5A
MT2A
PCBP2
NEK2
NUDT17
CCDC120
PCDH1
SBNO1
PLBD2
CSTB
MED12L
SCYL3
PRKACA
PEX2
BAG2
MGAT1
FZD4
BBS9
CLK4
ST3GAL4
LMF1
SOX8
DDX1
RBM7
C11orf71
PNN
TRAPPC6B
MPZL2
TCF7L2
RNF10
SMG5
PELI2
TMEM79
AASDH
CLUAP1
SLC3A2
IRX3
TENT2
SLC38A1
ZNF563
THAP7
ZFP41
ZBTB44
OSBPL1A
ZNF22
DHX35
EPHA7
CALM2
ACADM
SRSF3
C2orf73
KCNN4
MRPL34
ABHD8
CSF3R
GOPC
HMGN3
SINHCAF
POLR2B
NOA1
RPS9
SIRT4
OSR1
PLEKHG3
LRRC59
BCKDK
MFSD8
ABHD18
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
OR6B2
NDUFA10
CASD1
CLDN7
RAB11FIP2
LOC391322
MADCAM1
SLC9C1
DSG2
ADRM1
AGPAT3
SLC4A2
CDK5
TOE1
MUTYH
SIKE1
DNAH12
RNASE1
CDC14A
DNAJB1
TPD52L2
ABHD16B
PRPSAP1
LAMTOR5
ZDHHC3
EXOSC7
SLC30A7
EXTL2
TECR
KRIT1
ANKIB1
CD320
CLDN4
ZNF76
EEF1A1
S1PR2
OSER1
MRM1
ARHGEF33
UPK3BL2
FRMD3
NLRX1
CCDC9
PPP1R10
MRPS18B
TAF2
MYOZ3
SYCP2L
GCM2
ZNF891
ZNF10
SH2D3A
CALML5
FRG2
SNRPF
RNF168
CYB5A
DDX5
CEP95
ZNF69
HEXIM2
LTBR
MAPT
DTNB
RND3
RABL6
RPL23
WARS2
EFS
HUS1
UFSP1
ACHE
NADSYN1
DHCR7
SHPRH
WDR81
ENOSF1
LRRCC1
GPRIN2
GFM1
ZNF572
SQSTM1
SYPL1
DYM
C2CD4D
COP1
PRELID3B
BLVRB
SPTBN4
ZNF484
CCDC130
AMER1
ZBTB45
NUP85
PTBP1
ZBTB7B
HYAL1
HNRNPLL
POLRMT
OBP2B
TXNRD1
DSC2
ELP6
SEMA3E
CTNNA1
PNKD
SNX3
CCDC38
AMDHD1
DCAF10
SRSF5
H1-0
KLHL7
ADCK1
RASD2
EBAG9
BMI1
COMMD3-BMI1
COMMD3
SLC25A6
MTMR11
NEDD4L
TAF12
TKFC
DDB1
PPIL2
GSPT1
WDR43
STK32C
HMG20B
MDH1B
FASTKD2
NIBAN2
TEAD3
TMEM209
SSMEM1
SRSF7
PAK4
AQP5
NOD1
CRY2
DENND6A
GXYLT1
SIK3
CDK13
ANKRD50
THUMPD3
CYB5R2
DDT
DDTL
MARVELD3
HIBADH
POLR3B
RUFY1
MDP1
CHMP4A
GIT1
ANKRD13B
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
ZNF675
RFLNB
GSE1
MTFP1
CTR9
ITGB3BP
EFCAB7
ACTG1
CCDC88B
SIT1
FOXJ3
NDUFS6
MRPL36
GABPA
ATP5PF
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
ZRANB2
GOLGA5
TTC8
DPH6
IQCG
SUPV3L1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29
PAF1
MED29
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
LRR1
NEUROG3
HES1
PIN4
PTGES2
OAZ3
SUCLG1
UBE2I
HES3
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
VEZT
FGD6
FZD8
CYP26A1
SPATC1L
ARID3B
SEC11C
RPL7
RDH10
EIF2S3
GADD45GIP1
BICRA
SYBU
CDC73
HOXA3
PMAIP1
ID2
C16orf91
ARHGAP10
RPN1
GORAB
TMEM107
GTF3C4
DDX31
ZP4
NEUROG1
ATOH1
NEUROD1
CNPY2
BNIP3
SEC22B
LEFTY2
ZNF383
IGFBP2
LBX1
TPM1
TLE4
MRPL38
DNAJB7
TLE3
PHOX2B
SPCS1
GLT8D1
PDHX
APIP
TTI2
H2AW
HOXA2
ST18
TBX3
HOXA1
DUSP6
INSM1
CCDC33
LIN28A
METTL24
CDCA7L
ASB2
PCBD2
TEPSIN
NDUFAF8
ERRFI1
FGF19
ADAM18
ANKLE2
DNM2
TPRA1
PCGF1
LBX2
NBAS
RUNX1T1
TBX2
HOXB3
ALKBH5
P4HB
MLEC
PRUNE2
FBXO31
HPD
TMEM70
ELOC
DLL4
ANKRD28
SP5
RPS10-NUDT3
RPS10
PDHB
SMAD3
SYNPO
CLGN
DAPL1
DLX4
LPIN1
NPAS4
CAMTA1
ID3
TNFRSF19
ARHGEF28
PDE4D
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1