ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236748 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◣ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FAM187A
EFTUD2
CCDC103
NUP85
RWDD1
MRPS7
GGA3
GOSR2
HADHB
HADHA
TAOK3
SUDS3
ZNF335
PSMD12
NVL
BLCAP
RABL2A
TSN
RABL2B
RPS12
SLC35B1
CACTIN
MAPKAPK5
TSNAX
POLR2E
HSPA9
NME6
C19orf48
VDAC2
PNO1
POLR3F
DZANK1
RABGGTB
SEC61B
COX7A2L
RBBP5
VTI1B
PSMD1
SART3
ISCU
NUP205
ZRANB2
PAK1IP1
C6orf52
FARSB
FAM104A
C17orf80
RPS27A
CLHC1
STAM
REXO1
EXOSC5
BCKDHA
USP1
NFKBIL1
DDX39B
ATP6V1G2
SELENOF
HS2ST1
NCLN
LYRM4
FARS2
PSMG2
CEP76
XPNPEP3
ST13
DNAJB7
PI4KB
PES1
DCTN1
CAPRIN1
UFM1
TTC8
UPF2
GOLGA5
COMMD1
CCT4
RPL21
NDUFA4
SUPV3L1
APOM
BAG6
IQCG
RPL35A
ZNF576
IRGQ
OAZ3
TMED1
SMC2
VARS1
ATP5MG
DYNC1LI2
SUCLG1
PCBP1
RPS23
ATP6AP1L
STAM2
ANAPC7
MRPL11
TBCK
AIMP1
EIF4ENIF1
PROSER1
NHLRC3
MRPS5
SKP1
C16orf91
RPS29
LRR1
SRD5A1
NSUN2
ADK
AP3M1
ICE1
ACTR10
DPH6
CDC73
GORAB
OSGEP
APEX1
IPO13
PDAP1
BUD31
MAMDC2
STK36
RNF25
TM9SF1
RPS10-NUDT3
RPS10
CCDC43
TMEM101
PIN4
OR6B2
NDUFA10
TAF9
RAD17
AK6
RPN1
PAF1
MED29
GADD45GIP1
MLEC
HSPA1B
BABAM2
RBKS
SF3B3
COG4
DUSP12
AXDND1
ARHGAP11A-SCG5
ARHGAP11A
PTGES2
GTF3C4
DDX31
ZNF383
MRTO4
EMC1
SEC11C
EIF2S3
MRPL38
PCGF1
LBX2
SPCS1
GLT8D1
SMLR1
KLHDC8A
RPL7
RDH10
BICRA
CNPY2
MYCN
OPRM1
TCHP
ADAMTS8
PCNX1
CRYBG3
UBE2I
RPS24
POLR3A
BAHCC1
XKR7
SLC22A23
WRAP53
TP53
QPRT
RBM25
NRP1
CHD8
CCDC68
DDX1
WDR74
PLEKHA6
NRXN1
SRSF11
LRRC40
MFAP4
HSPE1-MOB4
HSPE1
HSPD1
APBA1
SYBU
NFATC4
ACVR1
XXYLT1
GPR88
GMEB2
SNX1
CIAO2A
HSD17B1
SNRPD2
QPCTL
ST6GALNAC3
TSPAN11
DPYSL5
JDP2
FAM162A
CCDC58
MYOG
LIMA1
CHN2
CPVL
EIF4H
DUX4
ALKBH5
ZCWPW1
MEPCE
INKA2
KCNN3
GRK5
NTN3
NELFA
OCA2
DYNLT1
CAPRIN2
ARSG
IGFBPL1
GBA
CXCR4
OMD
CS
BCAT2
TLX2
PKN2
SECTM1
MAD2L1BP
TOMM20
DVL3
ANO3
SPZ1
TMC6
TMC8
SLC35A3
CDON
KLF7
MEGF6
R3HCC1
LRRC43
CD9
MYLIP
NRM
PPP1R18
CCDC200
VPS50
HEPACAM2
MTRNR2L8
DLC1
CCN6
HNRNPA2B1
CBX3
RAB26
ARID3B
ANKLE2
GOLGA8R
HUS1
NFE2L1
TCP1
MRPL18
RFX8
CBFA2T2
PCGF3
ELAPOR1
CNBD2
C1orf194
TOB1
SAMD10
PRPF6
ACOT11
NPR2
PDHX
APIP
CHN1
TBX2
CYTH3
RARA
RAB27B
TSHR
HECTD3
CCDC33
ZBTB18
IDUA
PRRT2
MVP
PAGR1
CILP
TIAM2
RUNDC3A
IL6ST
AKNAD1
AFF3
MLF2
BRD4
MAN2C1
CD74
PRPF3
CDO1
TIAF1
RXYLT1
TXNDC11
ABCA4
VMP1
PTRH2
CLTC
TNFRSF19
TPCN1
ANK3
ACVR1C
RHBDF2
CRTC2
IFI16
SLC26A11
USP9X
SNN
CDC42EP2
PRDM10
ASXL2
KRTAP3-3
MTRNR2L1
PSMD6
MRPL12
SERTAD3
MTF2
UFSP2
C4orf47
COMT
TXNRD2
NHLH2
SMARCD2
CERK
FRG2C
BMF
LGSN
SYTL3
PTPN6
KTI12
C12orf57
FAM222B
CDAN1
MYL4
UNC5A
CIPC
SMAD5
CYP27C1
SORBS2
FARSA
CALR
F7
TUBB
RPS7
MDC1
C1orf185
NES
RPL27
RP1L1
DIS3L2
KIAA0319
NEDD4L
DNAL4
LEMD2
SECISBP2L
SF3B2
GAL3ST3
ZNF397
PLAC8L1
ID2
SH2B1
PAXBP1
PELI2
MGARP
AIG1
SPATA4
NCOR2
SLC35E3
DDX23
UBALD1
FRMD4A
UHRF1BP1
ZBTB26
B3GNT3
ARRDC4
FRZB
SMAD9
HMCN2
COL23A1
RIMS3
EFNB1
BRWD1
SLC47A1
FRMD6
GGA1
DGUOK
RARB
MRTFA
UBR5
ZNF785
CCDC167
GRIP1
LRATD1
NCR2
PHOX2B
TLN1
CREB3
ARIH1
CRMP1
CMTR1
SNAPC1
THSD7A
RBMS3
MBD6
DDIT3
DGKZ
RTBDN
TNFAIP2
MAST1
ADCYAP1R1
P3H2
SH3D19
TRDMT1
LDB3
SULF2
PLEKHM1
SATB1
GSTP1
RNF144A
STAT3
FYN
SPOP
RPAIN
NUP88
LOXL1
PLA2G12B
BIRC6
HCFC2
GLT8D2
SEC22B
AMZ2
PRKCSH
CCDC151
SLC12A5
ADNP
DNAJC22
EFCAB2
LYSMD2
PTGES3L-AARSD1
PTGES3L
RUNDC1
CHD7
DCT
CDH7
CRABP1
SYNPO
ZCCHC4
GCHFR
C15orf62
SRP9
SHMT2
GIT1
ANKRD13B
EYS
ARID2
TANC1
PANK2
PXYLP1
RGS3
FKBP5
BAZ2A
FRG2
ARHGEF1
MTMR14
ARL14EP
CENPBD1
TIMM10
C11orf96
RMDN3
NUMBL
SPATA25
CTSA
NEURL2
ELF1
WBP4
MEIS3
SLA
SKIL
CLASP2
CBX5
CEP120
ANKDD1B
HMGB1
USPL1
UQCRC2
PAN2
IL23A
LZTS2
PDE12
CRIP1
FBXO46
NRG1
RNF32
MEIOSIN
SMYD1
RPS27
RAB13
BRINP3
ABHD2
NOCT
SNRPE
B3GNT2
UGP2
RCOR1
COL25A1
CDC42EP3
PHLPP1
TMEM107
ZNF76
TRIOBP
MSRB2
NET1
TM6SF2
BAZ2B
DDR1
KDM3A
SSNA1
ANAPC2
UBAP2
KCNK2
PDGFRA
CDK6
PTPN13
TMEM244
DISP2
PHGR1
POLDIP3
FAM83E
SPHK2
RPL18
CNNM2
ATG101
PRPSAP1
CAPN10
METTL24
FBXO22
TLE4
PCBD2
CCDC174
TRIP4
ZNF438
SOAT2
IGFBP6
RPL26
IL18BP
ARHGEF25
AHCYL2
PRCD
ARHGDIB
HMGA1
S1PR4
RFTN1
MCL1
SMG7
MEMO1
CENPM
LIG3
ZNF503
NEUROG2
ZGPAT
ARFRP1
NEUROG3
PDE6B
HES1
MTRNR2L2
MSH3
DHFR
HES3
HOXA4
CDX2
VEZT
FGD6
FZD8
CYP26A1
SPATC1L
HOXA3
NFE2
PMAIP1
IER3
FLOT1
ARHGAP10
NDUFS7
ZP4
DHRS3
NEUROG1
ATOH1
NEUROD1
DPP9
SP2
BNIP3
KAT6B
ERCC1
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
TLE3
TTI2
H2AW
HOXA2
ST18
TBX3
ZNF746
HOXA1
DUSP6
INSM1
LIN28A
CDCA7L
ASB2
TEPSIN
NDUFAF8
ERRFI1
FGF19
ADAM18
DNM2
TPRA1
NBAS
FOXP1
RUNX1T1
HOXB3
P4HB
PRUNE2
FBXO31
HPD
MINDY2
TMEM70
ELOC
DLL4
ANKRD28
SP5
PDHB
SMAD3
CLGN
DAPL1
DLX4
LPIN1
NPAS4
CAMTA1
ID3
ARHGEF28
MRPL34
PDE4D
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1
STX18
RAB5B
KANSL3
FER1L5
RXRB
ANK2
PGK1
TMEM120B
ARID3C
DONSON
UPF3A
PHC2
HOXC4
ATF6
SLC39A7
MSX1
CCN1
PRRX1
SMPDL3A
OTUD7B
KATNB1
RBPJ
PPP6R3
KDM6B
LZTS1
TRIB1
FRA10AC1
MYLK4
BAIAP2
SNX16
SQSTM1
CLCN3
BCL3
POP5
GPCPD1
PDZRN3
NINJ2
GATA4
SIRT4
RARG
MFSD10
MTMR4
NR2F1
ABCC10
TOP2A
ID1
KCNAB2
KDM2B
ZNF687
ZNF718
ZNF595
ZNF367
SACM1L
USP17L20
PCGF2
NBPF1
ZFHX4
CCNL2
NRL
USP17L22
MUC3A
FOXP2
MRPS31
PSPN
ALKBH7
SMG6
CNOT2
HEXIM2
MIDEAS
FURIN
RFX1
ITGAV
ADAP1
NUBP1
NFKBIA
PKDCC
STIP1
CNTN1
OSBP
EIF2AK3
PSMB3
ZFAND2A
TLE2
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
ZNF608
LRATD2
PPCDC
KNL1
PCNA
IQSEC3
GADD45G
SOD2
ATP5F1B
TRIM41
RNF207
NR2F6
AHDC1
RBBP7
KAZALD1
MDM2
ABHD8
SLC45A4
KMT5A
LPCAT3
HMGCS1
AGO1
KDM8
JUP
CSF3R
RHBDD1
NLK
SMIM20
POLG
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
NCOA2
GPC6
RAB11B
G3BP1
SEPTIN9
B4GAT1
MYRIP
GLRX5
MACROH2A1
EVA1A
GRSF1
DSCAML1
CRLS1
CCL26
SLC7A5
RBFOX2
TLE6
FAM107B
RGS12
TRAF7
HNRNPD
ARHGAP24
SREBF1
DDA1
FAM72C
CITED2
SHF
TMEM94
SPG7
GADD45A
TRIM46
MEIS2
PLEKHG2
METTL11B
MIDN
DLG2
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FST
PRMT5
ANTKMT
DAGLB
BFSP1
EIF3D
INAVA
ACYP1
SSBP4
LCK
FAM167B
NEK3
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZFP36
SLC30A4
PLEC
CYP51A1
ARAP1
STX1A
H3C12
H2BC17
H2AC17
COX5A
SH3YL1
ACP1
MRPS28
ATP6V1E2
HOXC6
ANKMY1
SERPINE1
RAB37
TCF7L2
FRMD3
LTBR
HNMT
ADM
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
CNKSR3
ARID5A
ARHGAP4
KMT2A
CAPNS2
BRMS1
EVI5L
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
CEP41
DNAJB3
LAPTM5
CIC
SNCG
MMRN2
FAM72D
CDS2
PRKACA
TDRKH
HOXB1
MBD2
SYNJ2
DIABLO
CMSS1
LNPEP
CACNA1D
CSRNP1
PLAGL1
HOXC5
TXNRD1
RAC1
PHETA1
LFNG
ARID4A
INAFM2
GTF3A
LUC7L2
DMBX1
ZNF414
PNKD
FAM72A
SEC14L1
EVPL
HTR5A
KCTD7
IKBKB
WTAP
UBE2F
ARL8A
ROGDI
MSX2
TUBB4B
MT2A
TRABD2B
ANKRD1
AIFM2
COMTD1
IQGAP2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
LRP5L
INSM2
IL6R
USP42
DUSP9
C12orf73
NRSN2
TUBGCP3
CFL1
RNPEPL1
LAMP1
VOPP1
RNF149
NR2C1
RNF34
CCDC88A
GOT1
ZNF77
CCDC88B
RASSF2
LRIG1
UACA
NCOA7
BHLHE40
SH2D6
H6PD
CR1L
NEDD9
EPM2A
SH3BP2
KLHDC2
PAX6
TMEM60
PHTF2
HOXB4
ING1
RAI14
LMNA
PIKFYVE
IRF9
PIGV
USP3
CBX4