ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662636 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◣ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PGK1
SPATC1L
SP2
TEPSIN
NDUFAF8
RAB5B
ARRDC4
DOLPP1
DNM2
OSBP
P4HB
KATNB1
STIP1
ZNF687
NLK
UBE2C
TOP2A
SP1
TCERG1
GOT1
G3BP1
TDRKH
EVI5L
ACTL6A
ANKHD1-EIF4EBP3
ANKHD1
GLRX5
RFX1
STT3A
TUBB4B
HSP90B1
ARID4A
MAMDC2
EIF2AK3
ATP5F1B
PITPNM1
KAT7
MAMDC4
PRICKLE3
PXMP4
HSPA5
SKA2
PRR11
HNRNPUL1
RFWD3
SHC1
CKS1B
TMX2
MED19
PRR14
TMEM60
PHTF2
TOM1L2
DRC3
ZFYVE21
XRCC3
TMEM94
MVD
JUP
RECQL
GOLT1B
SNRPF
DROSHA
C5orf22
RBM27
TMEM70
ELOC
CRIP1
TEDC1
SPSB3
NUBP2
ARNTL
CIC
HNRNPC
LRRC45
CENPX
H2AZ2
MSANTD4
TMEM218
NCDN
KIAA0319L
MPV17L2
ARMC1
ATP5MC1
YIF1A
TMEM151A
TRAF2
ILF2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TOMM40
FAAP24
CEP89
WDR97
MAF1
KAT6B
OS9
PRKACA
MTMR4
PWWP2A
KPNB1
MTMR12
PDK2
CNOT1
MYLPF
TBC1D10B
PGP
BRICD5
PCP2
XAB2
TRIP10
GPR108
FLAD1
IMMP1L
ELP4
KHSRP
COQ8A
ZNF77
AKR1E2
RPLP0
TBCCD1
DNAJB11
FAM72C
FAM72D
SLC25A25
NAIF1
CAMTA1
SPAG7
HNRNPL
EEF1AKNMT
SARNP
ORMDL2
STAP2
MPND
FAM72A
CDC23
GOLPH3L
VIRMA
PSMD4
COPZ1
PROSER3
HSPB6
HGS
ARL16
TCF19
CCHCR1
PPWD1
CENPK
MAEA
PPP1R3F
FOXP3
ZFYVE26
RAD51B
METTL17
ANAPC5
YJU2
TICRR
PSPN
ALKBH7
DCTN4
WDR25
WARS1
SERP1
EIF2A
PHB
LRCH4
FBXO24
SSR3
NUMB
FDPS
NFATC2IP
MTR
ETF1
C16orf95
PITX3
GBF1
SEL1L
ARL17B
ARL17A
ZBTB3
CENPF
RNF5
AGPAT1
TMPO
MANF
DNAJC14
KDM4D
CWC15
SRP9
PRPF40A
ARL6IP6
TMEM217
TBC1D22B
HMGCS1
GATAD2B
MTFR2
ZNF695
LENG1
ANP32A
MNS1
ENSA
BCAS3
PANK2
PNPO
VPS26B
NCAPD3
MORN4
FRYL
MSMO1
H3C15
H3C14
H2AC19
H2AC18
UTP23
ZBTB32
MLH1
EPM2AIP1
FAM161B
COQ6
IARS1
ABHD2
HBP1
AK2
POGLUT2
BIVM
KHDC4
DCUN1D4
FARSA
CALR
PRRC2B
CCDC77
NCBP2AS2
NCBP2
ZSWIM4
POC5
NDUFS8
CHCHD6
TARS2
UBE2T
TTLL5
ERG28
DUX4
ZBTB5
ZSWIM3
ACOT8
CNOT3
ZNF680
KDM4B
PCGF2
PSMB3
VCP
SPTLC2
PAN2
IL23A
TSACC
CCT3
ECT2
RUBCN
ZNF785
WDCP
FKBP1B
UMAD1
UBALD2
BABAM1
NDUFA2
IK
TMEM160
BRIP1
RAB11B
BTD
HACL1
ZNF691
HMGCR
ANP32E
GLCCI1
WBP1
INO80B
CBX5
HNRNPA1
MSTO1
STIL
RBM48
PEX1
MRPL34
DDA1
ZDHHC16
EXOSC1
GATAD2A
BRAP
ACAD10
FBH1
ANKRD16
TROAP
MTOR
GSK3B
NGDN
NUDT2
KIF24
IVD
SIN3A
CKAP5
MCCC1
CYTH2
HNRNPAB
STK40
AP3M2
UNG
ALKBH2
MYH10
H2AX
MTRR
FASTKD3
SIVA1
FRG2C
ATP5PD
ZNF688
RWDD1
DDOST
RBM42
FAM126A
WDR89
RPS20
MCM3
PCNX3
MAP3K11
CCDC146
MAP3K3
RNF41
NABP2
INCENP
CYCS
RAB4B
MIA
CHCHD2
H2AW
ISOC2
H2BU1
RGMB
FAM111B
NCOA2
GFM1
LTN1
SLC25A42
ALKBH3
CDCA8
C1orf109
ASF1B
THAP1
ACAP2
CDKN3
BPGM
SDHD
TLE3
FRMD5
RPL27
TXNIP
WDR45
ZSWIM1
ZMAT2
CFAP43
MCM10
NAT16
ZNF718
ZNF595
ZNF143
USF3
DDX49
COPE
CCDC200
PRDM10
PODNL1
DCAF15
PAIP2B
CHD6
NDUFAF2
ERCC8
UNK
H3-3B
PLEKHA8
FKBP14
CCDC66
DDX39A
ARHGAP19
CANX
FAM72B
ATG9B
ABCB8
DICER1
GOLGB1
ZNF493
ZBTB26
KANSL2
FBXO5
KCNAB2
PRADC1
CCT7
RPS5
SLC33A1
TRAFD1
NRL
DCAF11
FAM156A
ZNF727
CDR2
IBTK
EIF4A1
STARD3NL
ABL1
TRAPPC6A
BLOC1S3
HDGFL2
SPAG8
HINT2
MON1B
RBM15
TXNL4B
DHX38
SETD3
CCNK
ZWINT
CEP131
CYB5B
ATP7B
ALG11
TTC14
ZNF775
BUB3
MRPS28
WBP1L
NUCKS1
NFE2L1
CYLD
SPRING1
RNFT2
GET3
SLC25A28
RAB3A
NEMP1
RPS26
IGSF9B
SRSF2
MFSD11
SAMM50
PTMA
AGFG2
ZNF519
PPOX
RBM14-RBM4
RBM14
UBE2J2
LMAN2
SPC25
MRPS30
FDFT1
MRPL24
CDC25C
CKS2
UVRAG
RTRAF
PPP6R3
SNRPE
PCLAF
DHX8
MXD1
TOM1
TNRC6B
PRMT1
PICK1
PMS2
AIMP2
POP5
YIPF4
PPP2R1A
SLC25A19
CNPY3
PNN
TRAPPC6B
GLO1
UBP1
ZBTB6
NUF2
CCDC130
OPA3
KLHDC10
NDUFB3
FAM126B
LAPTM4A
CCDC61
WDR46
PFDN6
HSD17B12
OXNAD1
DPH3
CGGBP1
ZNF654
TPRKB
F11R
DLGAP5
DCP2
PDXP
BUB1
BRCA1
GID4
ATPAF2
INTS3
GGCT
GRK6
STXBP5
TOGARAM1
KLHL28
EIF1AD
BANF1
ZNF555
PABPN1
KRR1
GINS2
SPRYD3
SF3B5
CDC6
NUP107
ZNF574
RNF181
VPS35
FCF1
AREL1
EIF3F
MTRNR2L8
PPP2R5A
AP2A1
TSKS
PCNT
C21orf58
LAS1L
NDUFB5
MRPL47
RRBP1
ATP6V0B
DPH2
ESR2
LCMT1
KDM4A
RTN4IP1
QRSL1
CDK5RAP3
ZSCAN20
ASPM
ERI3
PCBP2
RAP2A
POLR1H
CSTF1
AURKA
LINC02210-CRHR1
HLTF
ZFAND2A
TYK2
ZBTB9
H4C12
DUSP10
ZNF564
RAP2B
TCP1
MRPL18
TESK2
TMBIM6
PEX2
H3C10
H2BC14
H2AC14
VBP1
SLIRP
ALKBH1
SIRT2
NFKBIB
DNAJB5
PER1
JPT1
LMCD1
TPRN
TMEM203
NDOR1
NME7
BLZF1
PSMA5
SCNM1
LYSMD1
FAR1
NOL6
CENPA
PPM1B
TMA7
CCDC51
GINS1
TOMM40L
APOA2
ACTN1
GPR137
MFAP3
FAM114A2
CHCHD3
RUVBL1
LETMD1
GHITM
RPS24
POLR3A
ZNF141
RNF34
CDK5RAP1
PDIA4
MVK
FAM156B
ALG10B
C22orf39
EDEM3
PA2G4
INTS1
USP16
ELK1
ENPP5
METTL25
CCDC59
KMT5C
SOX4
SCAI
PRCC
BBX
ANAPC15
RAB5C
FAM204A
LRIF1
KMT5A
SELENOH
CAND1
RAB6A
EHBP1
CREBRF
ZMYM5
INTS4
PHF14
PCYOX1L
TRIM68
PGBD4
EMC7
SDF2L1
PPP2R5E
KIF20A
BRD8
NEU1
TIMM17A
SLC2A8
DDT
PHF12
CDC20
HSPA2
WDR74
PIP4P1
UBE2B
CDKL3
TPCN1
IQCD
SLC39A9
ERH
LSG1
LIN52
ALDH6A1
PPP1R12B
ADAMTSL5
NUDT5
CDC123
BAZ1B
MRPS23
FAM117A
MBD1
FAM83D
H2BC4
H2AC6
ZNF724
ERBB2
DCAKD
NMT1
PGAP3
KCTD9
CDCA2
RBM4
USP42
FRG1
PIN1
BLM
TSPYL2
COL23A1
HIBADH
SRPRA
HAGH
FAHD1
RABL3
GTF2E1
C19orf84
OGFOD1
NUDT21
ZNF736
FRG2
AURKAIP1
TFB2M
CNST
LCA5
RLN2
PC
SAMD10
PRPF6
ATP6AP2
H4-16
H2AJ
MORF4L2
CEP164
HMGB2
XRCC4
TMEM167A
RLN1
RBM39
PNKP
RPL13A
GSTO2
ZNF556
STAT2
APOF
TMEM41A
FAM222B
CENPM
TUT1
TXNDC16
EXOC4
CCND3
DGLUCY
RPS6KA5
TAF8
SELENOI
ADGRF3
MIA3
HMGB1
LARS1
OSCP1
C5orf51
IDI1
FRA10AC1
PARL
ALKBH6
LOC101927572
TIMMDC1
FDXR
PARPBP
NUP37
PSMA3
NUP214
H2BC12
H2AC12
FANCF
ETV5
STARD4
PMF1-BGLAP
PMF1
PDCD6
OXLD1
CCDC137
LAMTOR4
OTUD6B
CLNS1A
RPL37
HYLS1
C2orf42
CYB5A
PSMB7
MDM1
SCOC
GORAB
SON
GART
H2BC13
H2AC13
MED30
ARL6IP1
C12orf29
TULP3
DDX50
SASS6
TNFAIP1
IFT20
CD2BP2
ROMO1
KCTD16
YIPF5
FAM76B
CEP57
NRDC
MRPL16
H4C14
H4C15
KBTBD8
CSTF3
CFAP45
WDR53
FBXO45
SF3B2
GAL3ST3
SNRPG
MIIP
ATG2A
CSNK1G3
MZT1
BORA
DMXL1
MRPL11
TSR2
MPHOSPH8
TFAP2C
RRP9
PARP3
YWHAQ
TTBK2
NPAT
ATM
PAF1
MED29
EIF3M
PLPBP
OXSR1
STAT3
SLC30A9
TOB1
SNRPA
C19orf54
FNBP4
ZCCHC9
ZNF430
MAMSTR
VCPIP1
C8orf44-SGK3
ING1
PGD
FAM111A
HSPA8
ZDHHC12
PTBP1
TTC33
DDX10
BORCS7
GTF3C5
VASN
ZNF774
WDR3
GDAP2
EIF3D
TAF1A
TMEM183A
ELAC2
RPAIN
NUP88
CCDC15
SLC46A3
HINFP
CRNKL1
CFAP61
ALDH3A2
ISY1-RAB43
ISY1
H3C2
H4C2
H2AC4
ANXA6
C10orf143
IL6ST
HJURP
TTI1
RPRD1B
WDPCP
MDH1
UFD1
CDC45
ATG4C
NUP42
SWSAP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
GOLGA5
TTC8
DPH6
IQCG
SUPV3L1
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
MTRNR2L1
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
RPS29