ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236746 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◣ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RWDD1
NUP85
FAM187A
EFTUD2
CCDC103
PSMD12
ZNF335
HADHB
HADHA
GOSR2
MRPS7
GGA3
TAOK3
SUDS3
RABL2B
POLR3F
DZANK1
RABL2A
NVL
TSN
RPS12
BLCAP
MAPKAPK5
PAK1IP1
C6orf52
CACTIN
RBBP5
POLR2E
RPS27A
CLHC1
VTI1B
SLC35B1
TSNAX
EXOSC5
BCKDHA
PNO1
REXO1
NME6
ZRANB2
NCLN
NUP205
SART3
ISCU
RABGGTB
PSMD1
DCTN1
LYRM4
FARS2
FAM104A
C17orf80
COX7A2L
VARS1
C19orf48
HSPA9
PI4KB
SELENOF
HS2ST1
PES1
SEC61B
STAM
OAZ3
GOLGA5
VDAC2
RPL21
COMMD1
CCT4
IQCG
RPL35A
TMED1
UPF2
TMEM101
TTC8
FARSB
XPNPEP3
ST13
DNAJB7
NDUFA4
MRPL11
ATP5MG
SUPV3L1
PSMG2
CEP76
TBCK
AIMP1
USP1
ZNF576
IRGQ
MRPS5
DYNC1LI2
APOM
BAG6
SMC2
UFM1
ACTR10
CAPRIN1
IPO13
ANAPC7
DPH6
SRD5A1
NSUN2
STAM2
PCBP1
RPS29
LRR1
PROSER1
NHLRC3
RPS23
ATP6AP1L
SUCLG1
NFKBIL1
DDX39B
ATP6V1G2
PAF1
MED29
CDC73
EIF4ENIF1
GMEB2
PDAP1
BUD31
CRYBG3
ICE1
ADK
AP3M1
STK36
RNF25
BABAM2
RBKS
TAF9
RAD17
AK6
MLEC
C16orf91
SKP1
PIN4
RPN1
MAMDC2
UBE2I
RPS10-NUDT3
RPS10
OSGEP
APEX1
CERK
GORAB
ZBTB18
OR6B2
NDUFA10
SF3B3
COG4
BICRA
NRXN1
SEC11C
MRPL38
LIMA1
SLC35A3
GTF3C4
DDX31
PTGES2
XXYLT1
PCGF1
LBX2
MRTO4
EMC1
PCGF3
ARHGAP11A-SCG5
ARHGAP11A
METTL24
ZNF383
KIAA0319
GADD45GIP1
RFX8
IFI44
CCDC43
AXDND1
IGFBPL1
MYLIP
WDR74
SNRPD2
QPCTL
ALKBH5
NFATC4
TM9SF1
APBA1
HSPA1B
LRRC43
CDH7
UBAP2
RPS24
POLR3A
SMLR1
RPL7
RDH10
DUSP12
ANO3
CBFA2T2
AKNAD1
CDON
BAHCC1
SPCS1
GLT8D1
NHLH2
ANK3
PKN2
PRRT2
MVP
PAGR1
EYS
GBA
EIF4H
CHN1
SRSF11
LRRC40
TIAM2
CHD8
NELFA
WRAP53
TP53
RTBDN
MAST1
EIF2S3
MYCN
PHOX2B
TLE3
HRAS
SYBU
TLE4
JDP2
FRMD6
MICOS13
HSD11B1L
ECI1
CNPY2
GK2
TCHP
HSD17B1
ZCWPW1
MEPCE
MGARP
TSHR
RARA
MTRNR2L8
CBX5
R3HCC1
TOMM20
CLTC
LEMD2
NRP1
OPRM1
C8orf48
S1PR4
RBM25
RARB
F7
CS
DUX4
PELI2
MAN2C1
MLLT11
CDC42SE1
RUNDC3A
EBF3
GRK5
ANKLE2
GATAD2A
TBC1D16
CCDC40
ACVR1C
OMD
DDX1
LRCOL1
P2RX2
BAZ2B
DGKZ
PTPN3
TNFRSF19
KRTAP3-3
SIRT4
HSPE1-MOB4
HSPE1
HSPD1
NBAS
ARHGEF1
ACVR1
TCF4
ABCA12
HNRNPA2B1
CBX3
YTHDF2
RRM2
FLRT3
CLASP2
ELAVL4
FAM162A
CCDC58
SOAT2
IGFBP6
GOLGA8Q
TIMM10
ZNF521
MAD2L1BP
CEP85L
DYRK1B
RUNX1T1
CMTR1
SATB1
SETD5
CCDC200
SLC24A1
MTMR14
NRG1
CLVS1
MUC17
IDUA
ZNF217
TANC1
VMP1
PTRH2
MTF2
MDM1
DBNDD1
SYNPO
PDHX
APIP
GRIP1
LTBP4
LRATD1
SMAD5
TMEM210
LRRC26
CIPC
SLC26A11
IL26
MLF2
CCN6
GSTP1
IL6ST
CNNM2
CEP120
LIG3
GGA1
SPATA4
VPS50
HEPACAM2
ACTA2
MTHFD2L
UFSP2
C4orf47
MARCHF7
ZCCHC4
HUS1
EFCAB2
ATG101
COX7A2
INKA2
PAXBP1
SSNA1
ANAPC2
B3GNT3
RAB27B
FRZB
PPP6R1
MGP
TMEM91
TMEM38A
SMIM7
SMARCD2
DHX8
ATF7IP
RPS7
PCBP2
LOC100505841
SCAF8
NTN3
CYTH3
HECTD3
SECISBP2L
TCP1
MRPL18
TSPAN11
CCDC174
PRDM10
MBD6
DDIT3
BAIAP2
AFF3
TPCN1
MFAP4
SMAD7
PANK2
BRD4
APLP1
ARL14EP
CD248
ARID2
RBM39
USP9X
ZNF331
ELAPOR1
GULP1
C1orf194
VIP
CTDSP1
MTRNR2L2
MSH3
DHFR
PLEKHA6
FYN
SF3B2
GAL3ST3
ZNF121
TMEM107
TXNDC11
CYB561D1
FAM110A
ETAA1
KDM3A
CAPRIN2
ARIH1
MRPL12
PPP1R17
UQCRC2
DLG4
ACADVL
KIAA1217
CASK
FRG2C
SESN3
ITPR2
SORBS2
BRWD1
POLR1H
KCNT2
STAT3
NCBP3
HEXIM2
PRPF3
TMEM244
ZFP36L1
IRAK1BP1
PARP2
LGSN
BROX
AIDA
QPRT
BMF
CCDC68
PRKCSH
CCDC151
ZNF496
SERTAD3
PDGFRA
ZNF608
NUDCD3
TNPO2
COL23A1
USP32
CSRNP3
RAD51D
FNDC8
MAP1B
NMRK2
TUBB
MDC1
IGF2BP3
MYT1L
TMEM127
PAN2
IL23A
CIAO1
CALM2
COPS4
DUS1L
ZNF787
SLC25A28
NKIRAS2
DNAJC7
SLC25A25
FKBP5
NAIF1
ZSCAN12
FAM83E
SPHK2
RPL18
DVL3
RPL26
HMGB1
USPL1
FARSA
CALR
MSRB2
TMCC1
NOCT
NOP14
GRK4
DRAP1
C11orf68
ZBTB26
NET1
NME1
TLN1
CREB3
TRDMT1
CDC42EP2
GIT1
ANKRD13B
ELF1
WBP4
NUCKS1
RPS26
FAM222B
PRR14
TMEM259
PTGES3L-AARSD1
PTGES3L
RUNDC1
RPRM
GOLGA8O
LDLRAD4
EBF1
SCHIP1
RNASEH2A
PRDX2
RAD52
OCA2
CTBP2
BAZ2A
CIC
ACTB
ZMYM2
LDB3
KIAA1191
ARL10
SOX11
PCBD2
RBMS3
B3GALT2
GOLGA8R
PDE12
RFTN1
ZNF76
PDE6B
SAMD10
PRPF6
PRCD
ADRM1
NFIB
SMIM18
SPATA25
CTSA
NEURL2
POLDIP3
TMEM60
PHTF2
MRPS23
LMAN2
FNTA
TBPL1
UBE2Z
FBXW7
H4C12
ALMS1
SSBP3
RBM4
PLSCR5
NCAM1
RCOR1
TMBIM4
TNFSF18
UBB
MAP3K3
TLX2
RAB30
PSME3IP1
TRAP1
CDKN2AIPNL
RBM6
OGFR
TAF13
ZNF629
PARP9
DTX3L
PRPF8
PRPSAP1
COPS7A
SDCCAG8
CEP170
HNMT
UCHL5
RO60
OAZ1
RPS27L
ZDHHC4
C6orf89
DHX35
PNPLA1
ID2
SH2B1
TOB1
LETMD1
POLG
SRSF2
MFSD11
PKM
EIF4A3
DIS3L
NHLH1
CDIPT
GTF3C5
DLC1
PRKAG2
HCFC2
GLT8D2
NAP1L1
CKAP4
SACM1L
CHD9
EMILIN1
H1-10
C18orf25
TYRP1
RPL27
RPAIN
NUP88
C3orf52
NREP
KRTAP10-5
FRG2
CLIC4
MCC
CCDC178
MCL1
DNAL4
ACTG1
HNRNPD
PTPN6
C12orf57
WDPCP
MDH1
ID1
GAA
RPL7L1
TP53BP1
TMEM94
NUMA1
LRTOMT
MMP20
PTPN13
TOB2
EIF1AD
BANF1
ASH2L
SDHAF4
SDE2
DDX23
GARNL3
KEAP1
DCLRE1B
AP4B1
SLC16A3
SEZ6L2
ASPHD1
AFAP1
RACK1
LIMS1
LNPEP
EFNB1
PMEPA1
SRP9
ATP6V1G3
MAP3K14
CDC42EP3
SRGAP3
SLA
SFXN2
ARL3
ZNF503
MTRNR2L1
NEUROG2
ZGPAT
ARFRP1
NEUROG3
HES1
HES3
SKIL
HOXA4
CDX2
VEZT
FGD6
FZD8
CYP26A1
SPATC1L
ARID3B
HOXA3
NFE2
PMAIP1
IER3
FLOT1
ARHGAP10
NDUFS7
ZP4
DHRS3
NEUROG1
ATOH1
NEUROD1
DPP9
SP2
BNIP3
KAT6B
SEC22B
ERCC1
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
TTI2
H2AW
HOXA2
ST18
TBX3
ZNF746
HOXA1
DUSP6
INSM1
CCDC33
LIN28A
CDCA7L
ASB2
TEPSIN
NDUFAF8
ERRFI1
FGF19
ADAM18
DNM2
TPRA1
FOXP1
TBX2
HOXB3
P4HB
PRUNE2
FBXO31
HPD
MINDY2
TMEM70
ELOC
DLL4
ANKRD28
SP5
PDHB
SMAD3
CLGN
DAPL1
DLX4
LPIN1
NPAS4
CAMTA1
ID3
ARHGEF28
MRPL34
PDE4D
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1
STX18
RAB5B
KANSL3
FER1L5
ARRDC4
RXRB
ANK2
PGK1
TMEM120B
ARID3C
DONSON
UPF3A
PHC2
XKR7
HOXC4
ATF6
SLC39A7
MSX1
CCN1
PRRX1
SMPDL3A
OTUD7B
KATNB1
RBPJ
PPP6R3
KDM6B
LZTS1
TRIB1
FRA10AC1
MYLK4
SNX16
SQSTM1
CLCN3
ABHD2
BCL3
POP5
GPCPD1
PDZRN3
NINJ2
GATA4
RARG
MFSD10
MTMR4
NR2F1
ABCC10
TOP2A
KCNAB2
KDM2B
ZNF687
ZNF718
ZNF595
ZNF367
USP17L20
PCGF2
NBPF1
ZFHX4
ARSG
CCNL2
NRL
USP17L22
MUC3A
FOXP2
MRPS31
PSPN
ALKBH7
SMG6
CNOT2
DYNLT1
MIDEAS
FURIN
RFX1
ITGAV
ADAP1
NUBP1
NFKBIA
PKDCC
STIP1
CNTN1
OSBP
EIF2AK3
PSMB3
ZFAND2A
TLE2
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
LRATD2
PPCDC
KNL1
PCNA
IQSEC3
GADD45G
PSMD6
SOD2
ATP5F1B
TRIM41
RNF207
PXYLP1
NR2F6
AHDC1
RBBP7
KAZALD1
MDM2
ABHD8
SLC45A4
KMT5A
LPCAT3
HMGCS1
AGO1
KDM8
JUP
CSF3R
RHBDD1
NLK
SMIM20
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
NCOA2
GPC6
RAB11B
G3BP1
SEPTIN9
B4GAT1
MYRIP
GLRX5
MACROH2A1
EVA1A
GRSF1
DSCAML1
CRLS1
CCL26
SLC7A5
RBFOX2
TLE6
FAM107B
RGS12
TRAF7
ARHGAP24
SREBF1
DDA1
FAM72C
CITED2
SHF
SPG7
GADD45A
TRIM46
MEIS2
PLEKHG2
METTL11B
MIDN
DLG2
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FST
PRMT5
ANTKMT
DAGLB
RGS3
BFSP1
EIF3D
INAVA
ACYP1
SSBP4
LCK
FAM167B
NEK3
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZFP36
SLC30A4
PLEC
CYP51A1
ARAP1
STX1A
ABCA4
H3C12
H2BC17
H2AC17
COX5A
SH3YL1
ACP1
MRPS28
ATP6V1E2
HOXC6
ANKMY1
SERPINE1
RAB37
TCF7L2
FRMD3
UGP2
LTBR
ADM
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
CNKSR3
ARID5A
ARHGAP4
KMT2A
CAPNS2
BRMS1
EVI5L
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
CEP41
DNAJB3
LAPTM5
SNCG