ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814876 | Neuroblastoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◣ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
COMTD1
GPR68
TBX2
ENOX1
CNKSR3
IKBKB
C6
ZNF804A
KPNA4
HNMT
DAOA
HAPLN2
KCNJ6
PSMD6
HHAT
DGKB
TBX3
MTRNR2L2
MSH3
DHFR
SEMA5B
MGAT5
TTC30B
CBFA2T2
TEX101
KBTBD11
PDE3A
TMEM26
CYP51A1
ADAMTS18
RWDD1
CXCR4
VIP
GLYAT
FRMD3
IGFBP3
HTR4
SMIM30
ABCA12
C9orf92
PDZRN4
C1orf87
MARCOL
PKIB
KCTD7
TES
UGP2
SLC12A3
MYRFL
TNFRSF19
CLCN3
NT5DC1
CDH18
KRT82
MSRB2
FOLH1B
SCML4
CPO
KIAA0319
QPRT
CDK6
LEPR
LMO4
MYT1L
NUBPL
PLAC8L1
FEZF2
NELL1
MFSD6
EHF
RARB
SYBU
HABP2
PACRGL
OPRM1
BEND4
MTRNR2L8
FAM228B
PFN4
HAO1
KCNV1
DIABLO
ABHD2
RGS8
BANK1
PTPDC1
PTPRB
TLE4
DCTD
ARHGEF28
ADGRL2
FYB2
SYTL3
RNF34
IGFBP5
SRGAP3
KCTD8
TPH2
SLC28A3
PSME3IP1
ACTA2
TMTC2
NRXN3
ANO3
HS3ST5
MMP15
PLAC1
TYRP1
PDHA2
DEFB130B
DEFB130A
THSD7A
CCDC178
RARA
BIN1
OLFML1
ZNF335
COL3A1
NRXN1
IGDCC3
PDE4B
SH3RF2
CILP
EGLN3
ZFPM2
GADD45A
MME
PKDCC
GCSAM
LIMA1
LINGO2
RBFOX3
SULF2
C14orf93
LMCD1
HPGD
PDZRN3
ATP8A1
SLC37A3
GRWD1
ABCA4
GRK5
DLG2
CELF2
PTPRE
WDR74
DMD
GFRA3
NRSN1
CRKL
NRP1
IQCG
RPL35A
ZNF148
C1orf185
SPARCL1
MTRNR2L1
PMFBP1
COL10A1
ADAM18
FRA10AC1
SETD7
SH3D19
GBP4
SYT4
FREM1
DOCK10
GK2
GSC
DNAAF2
ZMYM1
RPS29
SULT1C4
WNT5A
KAZN
PRLHR
ZNF3
COPS6
NBN
POLR2E
CSRNP3
GOSR2
ADRB3
GPR162
DCC
ABRA
PXYLP1
EVPL
KCNIP1
SLC6A5
GAST
TRDMT1
GPR75-ASB3
GPR75
RABL2B
GHITM
NCAM2
OSR1
PCDH8
FAM187A
EFTUD2
CCDC103
PCDH9
EXOSC5
BCKDHA
VAV3
ACKR4
FAM209A
CDH12
MTRNR2L9
UBL4B
SGCE
TPD52
NECAB1
CLGN
N4BP3
CLK2
TVP23C
KCNK2
MDFIC2
BCL2L14
CERK
IGFBPL1
DAPP1
TSHZ1
OSBP2
SOX5
SEC22B
RP1L1
PLET1
ATP23
CADM2
RABGGTB
CHRDL2
HIGD1C
CD74
SCG2
ITGAV
PRG2
SNCAIP
KLHL1
PES1
MAGEB5
ID2
MRTFA
TMED1
PACSIN3
IRAK2
PPARGC1A
SCCPDH
ACACB
ANKRD28
ZNF330
HADHB
HADHA
ZFHX3
LMO7
MTNR1A
CNTN5
LNPEP
FAM124A
EPYC
SUPT20HL2
FGD5
SYT16
TMEM17
JDP2
MYH15
PSPH
CCT6A
TAOK3
SUDS3
NCR2
DOCK9
PTPN20
FBXO34
RFPL1
ZFHX4
ELAVL4
TMEM107
RABL2A
DCLK2
NOD1
APOH
POU4F2
SRGAP2C
SRGAP2B
GPER1
SH2D4B
GLI3
DIPK1A
KMT5A
CALHM5
LRRC43
GAB2
ST3GAL6
TRIB2
JUP
UNC5C
LRIG3
GABRG2
COX7A2L
RASL10B
ARHGEF10L
TMEM229B
RPS12
C3orf85
METTL24
B3GNT3
MAPK1
B3GNT4
ZNF608
MTRF1
NAA16
CRYGB
PIK3C2G
TUBE1
FAM229B
SIPA1L1
PCGF1
LBX2
CABCOCO1
TEAD1
RBFOX2
PCSK1
AGR3
GPR19
RIMS1
PLXNA1
DLC1
SLC17A2
ARID5A
OGFOD2
IL24
ABCB9
DEGS2
UFM1
RMDN3
OAZ3
GPR1
FYN
LOC283710
OTOGL
TDO2
CDH4
RHOBTB2
RAG1
HPD
PSMD9
APC
NUP85
ESRRG
HSD17B12
ATP6V1G3
CHST6
CHST1
B3GAT1
GPR22
DUX4
MRPS7
GGA3
MLH3
FGF19
SMTNL2
CLVS2
MAD2L2
CLDN12
SMC3
ZNF503
SMAD3
PAPOLB
RPS7
ASB6
NALCN
USH2A
GTF3A
DENR
TTC39A
IL17F
RGS13
HORMAD2
MARCHF9
CDK4
CHRNA9
TRPA1
MLIP
NRCAM
LIPK
C3orf49
RPS23
ATP6AP1L
SBNO1
FAM72A
MYT1
GLCCI1
ERN1
GPR88
RBM20
FRG2C
SART3
ISCU
FAM107B
KLHL32
STN1
C1QL3
LHFPL6
SORBS2
AVIL
PARP14
CACTIN
CASD1
MAPK10
NUP205
SEC61B
ZNF77
LRRN4
DDR2
POTEI
SNAPC1
COPB2
ERVMER34-1
RSPH1
AGPAT4
SUCLG1
CREB5
KCND2
TXNRD1
NOMO1
VSIG8
PSMD1
FAM135B
BLCAP
ITGA4
RPL21
ADK
AP3M1
SNCG
MMRN2
GPR34
FAM104A
C17orf80
MAGEB10
FAM151A
TLE3
TMOD1
OBP2A
UPF2
SHMT2
SLC10A4
TCF4
AQP4
FNDC7
SLC25A30
SOHLH2
PI4KB
HOXA3
MAF
RBBP5
IQCA1
SOCS6
GGT1
MGARP
FMN1
TNFSF13B
STK36
RNF25
LIMS1
ABLIM1
TRIL
RAMP1
FGF1
BBS9
POLR2M
RIPOR2
PNO1
SRPK2
ZRANB2
TPM1
SH3BP4
PPFIBP2
IFRD1
SCN1A
DCTN1
PRXL2A
ARL6IP5
UBA3
SMAD1
HCRTR2
SLC35B1
GALNT15
GPBAR1
RAB3D
TMEM205
CCDC159
FARSB
DNAH8
TYRO3
SCRG1
PM20D2
LIG3
TTC8
NCDN
KIAA0319L
TTC12
DDIT4L
CCDC68
PYROXD2
CSRP2
PCM1
TVP23B
SYNE3
ERI3
SLC10A6
STARD13
ANTXR2
MEGF6
PRL
SYNPO
LRRN3
GNA12
SCGN
SMAD2
OR2AE1
KIF26A
TMEM114
MYF6
MYF5
WT1
TRPM3
ECT2L
LRRC8B
CNTNAP4
SLAMF8
LIX1
MGP
KCTD3
FRZB
SF3B3
COG4
RAI14
ERAP1
SUPV3L1
BMPR1B
MAP2
BDNF
NVL
HTR3B
PLAAT4
ARID3B
DNAJB8
HOXC4
EVA1A
HOXC6
FAM160A1
THEMIS
SACS
FAM162B
CCT2
FNIP2
KNTC1
SMLR1
PSMD12
MARCKS
ABR
RGS18
KLK3
TSNAX
REXO1
GOLGA5
METTL7A
B3GAT2
SLC22A8
ANGPT1
AOPEP
TMC3
KLKB1
UBTFL1
CYTIP
RNF111
CAAP1
ELAPOR2
FRMD6
MEIS2
ANAPC7
LUM
C22orf34
TRPC7
DUSP6
PHOX2B
TTI2
ECE1
CD9
FAM110B
SLC13A1
RUNX1T1
RAB27B
NOX5
POTEJ
PCDH15
PROSER1
NHLRC3
CAPN14
GABRR1
OSBPL6
NFIB
LYRM4
FARS2
KCNE4
CORO2A
VRK2
PTPRR
MXRA7
ANKS1B
EPSTI1
DAZAP2
MRPL11
FAM219A
DNAI1
POF1B
VWA2
GTDC1
DISP3
CDC42EP3
APLP2
SSUH2
CDC7
BRSK2
AKAP1
AGTR1
SHD
PRICKLE2
EIF3D
ANKRD33B
PAK1
PRRX1
RASSF5
SSR3
BAZ2B
FBXO7
MUC3A
GRAMD4
MEI4
FIGN
HLF
TSFM
MFAP4
CRTAP
PRDM9
UBR4
TMEM131L
STAC2
DYNC1LI2
REC8
ERICH2
TBR1
OR5H1
VPS33A
KIF25
SLC8A1
NDUFA4L2
EPHA7
STAM
SRP14
FOXC1
CFC1B
C19orf48
APOM
BAG6
FAM24B
KCNK15
CDIN1
TUBB8
SULT6B1
NEK7
SRSF10
CD302
TECTA
PGM5
CAPNS2
MDM1
BAZ2A
SCG5
CDK2AP1
TMEFF2
KLHL6
PID1
SLC16A7
KCNJ2
HEXIM2
PLEKHA6
SLC35E3
KCNJ16
MLLT11
CDC42SE1
HEXB
DAB2IP
PTER
CCKAR
SH3BP5
RERG
MAGEB4
MAGEB1
VDAC2
PLSCR5
WDSUB1
SELENOF
HS2ST1
SLC7A14
LRGUK
PIPOX
CECR2
PROKR2
ARPP21
DNAJC15
FBXL16
PAM
SERTAD4
MDM2
CAPN2
TSPAN2
ESRRB
TBL1X
NUP107
IMMP2L
SRGN
ELK3
STAMBPL1
FNDC5
ALK
TSSK1B
SRD5A1
NSUN2
SLC26A7
ASIP
PDE8B
PAQR6
PDAP1
BUD31
SMIM28
CAPRIN1
PPARG
GJA5
NWD2
CCK
SCHIP1
MID1
CCDC177
DYNLT1
MXD1
DNAJC12
SLC35F3
CYP20A1
CRABP2
FAM163B
RIMS2
NOX4
ACYP1
NRP2
GNAS
HSPA9
PHC2
CNTN6
CPSF6
ID1
SSH1
NOS1
FLRT3
MPP4
KCNN3
RPS24
POLR3A
USO1
RIIAD1
CELF3
PKIA
DSEL
ZNF576
IRGQ
IRF2BP2
CCDC183
PI15
SLA
TMEM196
ICA1
NDNF
CFC1
RFTN1
KIF1A
CYP2S1
FAM241A
CCDC174
NEO1
FHL2
OSGEP
APEX1
HSP90AA1
LRRTM4
WDR20
HAUS6
HOXC5
LRRC69
SCRT2
SLC25A12
ENPP2
LINC01638
FGL1
HAND2
HS6ST3
PDE1A
STAM2
POFUT1
PLAGL2
HGD
HYKK
OVCH2
LNX1
RPP25
KRT17
NREP
PRCD
TGFB2
IPO13
SOX6
LSMEM1
GDF5
DDAH1
TCF7L2
DZIP3
CIP2A
VANGL2
RNF113B
CCSER1
VCY1B
VCY
SEPTIN9
ARHGEF2
HMGCLL1
SULF1
AGAP2
TSPAN31
MCU
CASP7
TMEM101
CHD1L
PRKAB2
TNFAIP2
BCAS1
TM4SF1
LRATD1
ZCCHC8
TFPI
TBC1D23
S1PR2
FRS2
GPCPD1
MAP1B
NUMB
ANK3
AKAP12
SLC6A2
TRIM24
SNX6
S100A5
S100A6
CRYBB1
RNF145
C1QTNF7
NUDT7
TRAF3IP3
ERBB4
SUMO4
COLQ
TLL1
RAPGEF2
BCO2
NUAK1
SETD1B
GRAMD1B
ACTR10
ADI1
TTC13
ARV1
BCAT2
JMJD1C
AFF3
SEPTIN11
ACVR1
TSHZ2
C12orf65
ZFAND6
PBX1
HECW2
CELA2A
SMC2
FRG2
PRKCQ
CAV2
CYTH1
PPM1D
JARID2
SLC25A44
ABCC3
MMRN1
AHNAK
PLCH2
ARHGAP11A-SCG5
ARHGAP11A
ZBTB18
ANK1
SNX22
KIF6
NKX6-1
RPS27A
CLHC1
MTUS1
ZNF792
MAMDC2
GUCY1A1
ADGRD1
STOM
LIPC
ETV1
TENM3
HTR1F
ERMP1
CABLES1
TM2D1
FAM71B
POLR3F
DZANK1
ABCB1
SPATS1
EPAS1
ACOT11
JAKMIP2
PAK1IP1
C6orf52
BEND7
IDE
DIP2C-AS1
MSX2
ALDH1A2
TRIOBP
SKAP1
PGM1
C12orf42
NCLN
MRPS5
PDE12
HDAC9
ANKDD1B
OSBPL7
ZMYND11
FTCDNL1
POU5F2
HTR2C
SIRT4
TMC6
TMC8
MAP3K3
LAPTM4B
CTDSP2
CHODL
MGAT4C
KAT6A
NFIA
CCBE1
NFKBIL1
DDX39B
ATP6V1G2
COLEC11
TOM1L1
CNBD2
HOXD8
TM4SF18
NOMO3
SNX16
KCNIP4
GASK1B
RGPD1
RGPD2
SNAP47
SATB1
SAMD13
SKP1
PCDHAC2
IL19
DGKE
C17orf67
SLC44A5
LRRC18
PPP1R3D
FAM217B
SPAG9
NES
CEP41
GBA
KCNK16
TP73