ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748853 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◣ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

COL23A1
MTRNR2L1
MTRNR2L8
MUC3A
MTRNR2L2
MSH3
DHFR
EPN1
RGPD1
RGPD2
LRRC6
TRIM48
CDH11
WDR74
LOC105378979
UGT1A3
DUX4
MAMDC2
IFIT3
SPAAR
ARID1B
CCDC200
CYP4F11
OTUD6B
OR2T1
DLG2
GALR1
MTRNR2L9
FRG2
PXYLP1
FRG2C
OPRL1
LKAAEAR1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
RWDD1
CACTIN
POLR3F
DZANK1
TAOK3
SUDS3
IPO13
NUP85
DYNC1LI2
VDAC2
PSMG2
CEP76
FAM187A
EFTUD2
CCDC103
HSPA9
NVL
VTI1B
NUP205
POLR2E
RPL21
GOSR2
TBCK
AIMP1
MRPS7
GGA3
ZNF503
NCLN
EXOSC5
BCKDHA
DCTN1
ATP5MG
C19orf48
STAM2
HADHB
HADHA
REXO1
SRD5A1
NSUN2
STAM
BLCAP
TSNAX
FARSB
SKP1
SEC61B
PES1
LYRM4
FARS2
SLC35B1
TSN
UPF2
NDUFA4
ZNF576
IRGQ
BABAM2
RBKS
ACTR10
PAK1IP1
C6orf52
PNO1
CAPRIN1
RBBP5
PSMD12
DPH6
COX7A2L
GOLGA5
IQCG
TTC8
SART3
ISCU
SUPV3L1
RPS23
ATP6AP1L
TMED1
VARS1
RPL35A
ZRANB2
PI4KB
MRPS5
SMC2
ANAPC7
PDAP1
BUD31
EIF4ENIF1
ADK
MRPL11
PCBP1
USP1
SELENOF
HS2ST1
FAM104A
C17orf80
AP3M1
ICE1
UFM1
NEUROG2
RPS12
RABGGTB
PROSER1
NHLRC3
SF3B3
COG4
XPNPEP3
ST13
APOM
BAG6
ZGPAT
ARFRP1
RPS27A
CLHC1
OSGEP
APEX1
TM9SF1
COMMD1
PAF1
MED29
NEUROG3
CCT4
HES1
RPS29
PDE6B
RARB
HES3
PDE12
NFKBIL1
DDX39B
ATP6V1G2
PTGES2
SKIL
HOXA4
UBE2I
OR6B2
NDUFA10
PIN4
LRR1
CDX2
VEZT
FGD6
FZD8
CYP26A1
SOAT2
IGFBP6
SPATC1L
ARHGAP11A-SCG5
ARHGAP11A
ARID3B
MRTO4
EMC1
HOXA3
TAF9
RAD17
AK6
NFE2
PMAIP1
SUCLG1
IER3
FLOT1
ARHGAP10
ID2
STK36
RNF25
NDUFS7
ZP4
DHRS3
SYBU
NEUROG1
ATOH1
OAZ3
RARA
NEUROD1
TMEM107
EIF2S3
RPL7
RDH10
SEC11C
DPP9
SP2
SH2B1
BICRA
BNIP3
KAT6B
GADD45GIP1
ERCC1
LEFTY2
BBS9
IGFBP2
LBX1
TPM1
SEC22B
TRIP10
GPR108
SPATA25
CTSA
TTI2
H2AW
HOXA2
ST18
TBX3
NEURL2
HOXA1
DUSP6
INSM1
CNPY2
LIN28A
TLE3
CDCA7L
ASB2
TEPSIN
NDUFAF8
GTF3C4
DDX31
ERRFI1
FGF19
ADAM18
ZNF746
DNM2
TLE4
TPRA1
CDC73
FOXP1
CCDC33
PCBD2
HOXB3
P4HB
PDHX
APIP
PHOX2B
NBAS
PRUNE2
FBXO31
HPD
MINDY2
TMEM70
ELOC
RPN1
DLL4
ANKRD28
SP5
PDHB
C16orf91
SMAD3
TBX2
CLGN
GORAB
DAPL1
ZNF383
DLX4
LPIN1
NPAS4
CAMTA1
ID3
RUNX1T1
ARHGEF28
MRPL34
PDE4D
ANKLE2
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1
STX18
RAB5B
SPCS1
GLT8D1
KANSL3
FER1L5
RXRB
ANK2
PGK1
TMEM120B
ARID3C
DONSON
UPF3A
PHC2
METTL24
HOXC4
ATF6
SLC39A7
MSX1
CCN1
SYNPO
PRRX1
SMPDL3A
OTUD7B
KATNB1
RBPJ
PPP6R3
ARRDC4
KDM6B
LZTS1
TRIB1
MRPL38
FRA10AC1
MYLK4
SNX16
SQSTM1
CLCN3
BCL3
POP5
GPCPD1
PDZRN3
XKR7
NINJ2
GATA4
RARG
MFSD10
MTMR4
HUS1
ABHD2
NR2F1
CS
ABCC10
TOP2A
TNFRSF19
KCNAB2
KDM2B
ZNF687
ZNF718
ZNF595
PANK2
ZNF367
PCGF2
CCDC174
NBPF1
ZFHX4
ID1
CCNL2
NRL
FOXP2
MRPS31
ALKBH5
PSPN
ALKBH7
SACM1L
SMG6
CNOT2
MIDEAS
FURIN
BAIAP2
RFX1
ITGAV
ADAP1
NUBP1
NFKBIA
SMARCD2
PKDCC
STIP1
CNTN1
OSBP
EIF2AK3
PSMB3
ZFAND2A
TLE2
RASSF5
RNF103-CHMP3
RMND5A
HEXIM2
DCAF11
LRATD2
PPCDC
KNL1
SIRT4
PCNA
IQSEC3
GADD45G
SOD2
ATP5F1B
TRIM41
DNAJB7
POLDIP3
RNF207
NR2F6
AHDC1
RBBP7
KAZALD1
MDM2
ABHD8
SLC45A4
PCGF1
LBX2
KMT5A
LPCAT3
HMGCS1
AGO1
KDM8
JUP
ZNF608
CSF3R
RHBDD1
NLK
SMIM20
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
DYNLT1
ARSG
NCOA2
GPC6
RAB11B
G3BP1
B4GAT1
MYRIP
GLRX5
MACROH2A1
EVA1A
GRSF1
DSCAML1
CRLS1
CCL26
SLC7A5
RBFOX2
POLG
TLE6
FAM107B
RGS12
TRAF7
ARHGAP24
SREBF1
DDA1
FAM72C
CITED2
SHF
SEPTIN9
SPG7
GADD45A
TRIM46
MEIS2
PLEKHG2
METTL11B
MIDN
PSMD6
HNRNPD
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FST
PRMT5
ANTKMT
DAGLB
CBFA2T2
BFSP1
TMEM94
EIF3D
INAVA
ACYP1
SSBP4
LCK
FAM167B
USP17L20
NEK3
USP17L22
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZFP36
SLC30A4
PLEC
NELFA
CYP51A1
ARAP1
STX1A
RGS3
H3C12
H2BC17
H2AC17
COX5A
SH3YL1
ACP1
QPRT
MRPS28
ATP6V1E2
HOXC6
ANKMY1
SERPINE1
RAB37
TCF7L2
FRMD3
LTBR
ADM
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
CNKSR3
ARHGAP4
KMT2A
CAPNS2
BRMS1
EVI5L
LIG3
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
CEP41
DNAJB3
LAPTM5
UGP2
PRDM10
SNCG
MMRN2
HNMT
FAM72D
CDS2
PRKACA
AXDND1
TDRKH
HOXB1
MBD2
SYNJ2
DIABLO
CMSS1
CACNA1D
ARID5A
CSRNP1
PLAGL1
HOXC5
TXNRD1
RAC1
PHETA1
ARID2
MTF2
LFNG
ARID4A
INAFM2
GTF3A
LUC7L2
LNPEP
DMBX1
ZNF414
PNKD
FAM72A
SEC14L1
EVPL
DLC1
HTR5A
KCTD7
IKBKB
CIC
MBD6
DDIT3
WTAP
UBE2F
KDM3A
RPS24
POLR3A
ARL8A
ROGDI
MLEC
MSX2
TUBB4B
HMGB1
MT2A
TRABD2B
ANKRD1
AIFM2
COMTD1
IQGAP2
TCTEX1D4
BTBD19
TIGD1
EIF4E2
LRP5L
INSM2
IL6R
USP42
DUSP9
TPCN1
C12orf73
NRSN2
TUBGCP3
CFL1
RNPEPL1
LAMP1
VOPP1
RNF149
NR2C1
RNF34
CCDC88A
GOT1
HNRNPA2B1
CBX3
ZNF77
CCDC88B
RASSF2
LRIG1
UACA
NCOA7
BHLHE40
SH2D6
H6PD
CR1L
ABCA4
NEDD9
EPM2A
SH3BP2
KLHDC2
PAX6
HOXB4
SYTL3
HSPA1B
ING1
RAI14
LMNA
PIKFYVE
IRF9
TLN1
CREB3
PIGV
USP3
CBX4
NRCAM
PRDM12
IFI16
CDK6
TRDMT1
EIF1B
CPSF4L
ZNF3
KRI1
CDKN2D
ZNF76
NCBP2AS2
NCBP2
RBM15
KLF6
CCL16
ZNF827
LRCH4
FBXO24
CRKL
NHLRC1
SEMA5B
TRAF4
RPS10-NUDT3
RPS10
SLC25A19
SCAP
TRIM7
TES
ORMDL3
ERI3
GPAA1
EXOSC4
PC
NKX1-1
MYADM
ANKS4B
STX16
NKIRAS1
TSPAN4
POLR2L
METRN
TF
MARCHF3
CLK1
INHBE
RXRA
ZDHHC4
GFOD1
ICAM1
E4F1
POLR3E
ENO1
PARK7
NANP
CXXC5
CEBPE
NEO1
TACC1
KPNA4
HSP90B1
CYB5R4
POLR2J3
PCTP
UNC13D
PXMP4
FAAP24
CEP89
ANP32E
HECTD4
ATP2B2
USPL1
SORBS2
MPND
ATG16L1
ZC2HC1C
TTC30B
GPT2
C14orf93
UBE2C
TMEM60
PHTF2
CCDC114
SH3BP4
SULF1
SRCAP
LOC730183
KCNH7
MVD
TOMM40
MPC1
IRS1
SRSF2
PACSIN2
MFSD11
GSTP1
PAQR8
CBX5
GPR35
UGT1A1
L1CAM
LASP1
LMO4
GGT1
TRAF2
GPATCH8
HNRNPC
ATP23
SRSF11
ATP5MC1
UBXN10
TBL1X
MPV17L2
CELSR3
ETV4
TANK
ALDH4A1
PLEKHF2
CASC3
ABLIM3
ETFBKMT
CCDC107
LYL1
CDC42EP3
STARD4
KMT2E
SCYL1
TMTC4
HNRNPUL1
CBFA2T3
ADGRL2
FILIP1L
ARNTL
YARS1
S100PBP
PRAM1
SNX3
SDSL
RHBG
TXNDC11
ZNF148
RNF144A
LRRC59
METTL25
CCDC59
ZCCHC3
FMC1-LUC7L2
FMC1
SHC1
SHB
CKS1B
TMPPE
GLB1
HIBADH
RAB17
LRRC40
PITPNM1
CAT
TCERG1
MRS2
GSN
ELOVL6
PLEKHO2
PKM
LDLR
DNAJB1
SLC9A1
GRWD1
NRM
MAPKAPK3
KRT8
TMC7
LRRN4
PGP
BRICD5
ATP5MPL
KPNB1
FAM24A
CYCS
C8orf37
MAP1LC3B
MTRF1L
BCAR3
DBX1
PPFIBP2
CCDC38
AMDHD1
TMEM14A
DEAF1
BAZ1B
NRSN1
ERBB2
DCP1A
SKA2
PRR11
DTX4
H4C12
SIRT1
CALM2
ARIH2
CATSPERG
KIF26A
ZNF740
CSAD
PRR14
UPP1
TMEM59L
TBC1D8
FAM227B
DTWD1
CRLF1
SERPINB9
HSPA5
MSMO1
CPLX2
PCM1
WDR18
FAM228B
SLC25A51
MEF2D
SHOX2
RSRC1
TYROBP
CXCR4
JUNB
CNPY3
CCNL1
WBP1L
ABCB1
PEX14
DFFA
JAK3
PANK4
HES5
NUF2
HOXD3
CDX1
ABCG2
RAB11A
STK38
SLX1B
SLX1A
BOLA2B
BOLA2
PAX8
DMD
URGCP
ANKRD39
FBXO41
SCNN1A
TOP2B
LSM2
FGG
INPP5D
UNK
CASD1
RPS6KA1
ITGB2
FRAT2
DBP
NAT8
DAOA
BORCS6
NFE2L1
PSMD3
NBEAL2
C11orf24
ASB6
TYRO3
KAT7
CCPG1
C15orf65
KCNK16
SPINK1
NUMB
HEBP2
FDFT1
NR1D1
REV3L
IQSEC1
NCOR2
RAB3D
OTX1
ACTL6A
ZNF219
IGF2BP3
PTPDC1
HBP1
NBN
FASTKD1
IGFBP5
PSMD9
NTMT1
CCDC57
MRPL4
KAT6A
ATXN1L
AKAP1
TRIP4
LONRF3
MLLT6
H3-3B
SCML4
GFRA3
NR1H3
GLI1
ENOX1
WDR97
PKN2
MAF1
TMEM9
TUBB
HMGN4
CELF1
TMEM169
PECR
EEF1AKNMT
TRAM1
MMP15
DNAJB8
ZNF22
JAK1
SPAG8
HINT2
MANF
PACSIN3
SKIV2L
NELFE
SRP14
KHSRP