ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPG7
IER3
FLOT1
PLCB2
NADK
NFE2
INAVA
PRAM1
LAPTM5
NCOA2
HMGCS1
PPCDC
ZNF414
SKIL
ARHGAP4
UNC13D
MTRNR2L2
MSH3
DHFR
ANKMY1
RNPEPL1
GRAP
CD38
GRAPL
LCOR
C5AR2
RNF166
STX1A
GFOD1
NIBAN3
CXXC5
CBX4
CCL2
MEF2D
HSH2D
MYRF
DHRS3
GRK6
SPATA1
GNG5
FARSA
CALR
MTRNR2L8
MIDN
PCNA
CDS2
ARHGAP45
DLG1
RASGRP2
SQSTM1
DZIP3
CIP2A
PDE4B
MBD6
DDIT3
CSF3R
MAP2K3
FGR
INSIG1
COX20
ARID3B
MYO1G
MYO1F
CSK
IDH1
UPF3A
SIRPA
ARIH2
RPS6KA1
P2RY2
DBP
TPPP3
KIF21B
DOT1L
CENPH
CCDC88B
WDR74
ZNF718
ZNF595
FMNL1
ZCCHC24
ZC3H12A
ASB2
NFKBIA
KRI1
CDKN2D
NRL
DCAF11
FDFT1
FDPS
MKLN1
TRERF1
S100P
NFIC
KAT6B
OLIG1
ATP8B4
SSH3
MRAS
NLRP3
LYL1
ARHGEF2
TOX2
ICAM1
BAZ1B
PRKCD
SULT2B1
PITPNM2
DENND4B
RASSF2
MYEOV
C16orf54
SLC25A19
LIMK1
BBC3
BCL3
RBM15
GPAA1
EXOSC4
SYTL1
RAB11FIP3
DRAP1
C11orf68
C11orf91
CD300A
KAZALD1
ARHGEF18
DNAJB1
MSMO1
KRAS
PSMD3
PKN1
POC1B-GALNT4
POC1B
GALNT4
CCDC114
EMP3
TMC6
TMC8
KEAP1
LRPAP1
ZNF740
CSAD
SHISAL2A
CD248
SEC14L1
SNX15
FADS3
ATG16L2
S1PR2
RARG
RAB3D
CTBP2
GHDC
CCDC57
RUNX1
CEBPE
TMEM104
NAT9
SRGAP2C
SRGAP2B
LYST
INAFM2
CYBA
PRTN3
BHLHE40
MRPS31
RAB11FIP1
EMILIN2
BIN2
NUP210L
HUS1
SMARCD2
ARID2
SREBF1
MCRIP2
ADGRG5
RNASEH2B
NDUFA4
EPM2A
SPATA25
CTSA
PIK3AP1
ZSWIM1
PACC1
TBL1XR1
AGTRAP
VSIR
PDE12
TRIB1
LRMDA
GALNT9
HES1
PDE6B
SMIM20
HMGCR
RAC2
CDCA7L
NPEPL1
CLEC3B
EVL
DUSP10
SLC47A1
LGALS1
TCTEX1D4
BTBD19
SLC35D1
PKM
E2F3
GRK2
PTPRCAP
H4C11
LTB
LST1
SLC22A18
NOL4L
ACTL9
P2RX5
PMF1-BGLAP
PMF1
GSE1
FERMT3
LHX3
SETD1B
CFD
YARS1
S100PBP
UBE2E1
MTRF1L
AP2S1
NR2C1
H6PD
IMPDH1
TM4SF19
ARRB1
KRT8
AP5B1
PLAU
CYP51A1
GYPC
RAP1GAP2
SPDYE13
IGSF10
SPRED2
CITED4
EVA1B
MAMSTR
ALOX5AP
AHNAK
FCGRT
ANKRD13D
ASB1
TNFRSF4
TNFRSF18
MGAT4B
SH2B1
CCDC174
TRIM8
SCUBE1
MAP1S
MID1IP1
ZNRD2
FAM89B
EHBP1L1
MYBPH
OAZ1
HSP90AB1
PLIN2
LMTK3
JUP
TRIB3
HIVEP1
RAB37
TANK
SQLE
SOAT2
IGFBP6
GPCPD1
ADGRG3
RBBP5
ANP32E
NCF1
DUS1L
SMCHD1
NINJ2
SLC9A3R1
GMEB2
ZNF746
UPP1
USP3
PARP15
GBE1
MXI1
RHOF
MLXIPL
HECTD3
PECAM1
TYROBP
IFNGR1
ARL4A
CD1D
IGF2BP3
NUFIP2
PKN2
STRA6
ATF3
MTRNR2L1
WDR43
ZASP
SAP25
ADPRHL1
PDP2
H4C14
H4C15
MAP3K8
TPRA1
PPP1R27
MCRIP1
PWWP2B
PIKFYVE
GPR132
AGRP
SMG6
ETFBKMT
TAGLN2
RCAN1
SLC12A6
MSRB1
C12orf75
RNF103-CHMP3
RMND5A
SLC51A
PEAK3
PLEK
UMODL1
CTTN
TBC1D10C
PPP1CA
PIK3CD
SLC16A3
SLC1A5
NFIL3
DENND2D
TSPAN16
GRIFIN
PPP2R5B
TLR9
SIPA1
CTDSP1
GPR160
ICAM3
RHBDF1
MPG
GTF3A
CPSF4L
C3orf86
GPR146
TBXA2R
SH3BP2
CA11
SELPLG
RARB
MINDY2
CDK13
SH2B2
ADAP1
ADRM1
KLF16
PDE8A
PLEKHO2
GMIP
SEPTIN9
ZC3H4
S1PR4
LDLR
DENND6A
GLIPR1L1
CAPS2
SNX33
H4C9
DSCAML1
OPA1
S100A2
SH2B3
TRAPPC5
MCEMP1
NKIRAS1
NR1D2
BCAP31
ABCD1
ATXN7L2
TCF3
RCOR2
UBALD2
BAZ2A
LRPPRC
PDCD4
GFI1
ARID3A
AXDND1
MTRNR2L9
CLIC1
DDAH2
PCYT1A
SCD
IQGAP2
ZNF217
CTCF
FOXK1
LOC388282
ATP2A3
EFHD2
TMEM101
FBXO41
ACACA
KCNAB2
TXNRD1
CD82
PPARG
TSPAN32
C11orf21
PCNX3
MAP3K11
P2RX1
GPATCH8
WNT10B
UBC
SLC17A9
TREM1
TRPM2
MVK
POM121C
PPIAL4C
PPIAL4A
PPIAL4H
CCDC154
NAMPT
KCNIP1
STEAP3
BABAM2
RBKS
PPP1R18
KLHL24
CDK9
MYADM
CLTC
NCOA4
MRGBP
PHF19
KBTBD2
FGGY
RGPD1
RGPD2
FOS
HRH1
CBFA2T3
NDRG2
RAPGEF1
ARHGEF40
ZDHHC17
AVPR2
ATP13A2
PDLIM7
DIO1
LY6K
CHPT1
MICAL1
IRF2BP1
MTHFR
CLCN6
LZTS2
CCDC9
ZNF276
VPS9D1
PRNP
VPS72
TMEM143
SYNGR4
EIF4A3
VOPP1
PLEKHA8
FKBP14
UBE2J1
ITGB2
TRIM11
TAC4
DUSP7
C1QTNF4
ZGPAT
ARFRP1
PMPCB
TAF1A
EPN1
ICAM5
ICAM4
PTCD1
CPSF4
MPO
BPI
C16orf74
LONRF3
OGFOD2
PTPN6
TBC1D14
ATR
COPS7A
QPRT
HBP1
H4C13
H3C11
LINGO1
B3GNTL1
PPIAL4G
MTF2
TEX2
ANK1
C19orf53
MFAP4
ZSWIM9
LIG1
NOG
GALNT7
LPCAT3
PLEKHG2
ZFP36
NUDT15
ADM
STK35
RHOH
STK3
FSCN1
HSPH1
OSR2
TFAP2A
VIPR2
AMY2A
GOLIM4
OAF
ZNF584
KMT2D
CAMP
LIMD2
CPQ
SLC9A5
FHOD1
PPRC1
QRICH1
HIP1
CPXM1
FRA10AC1
PIP4P2
ITPRIP
PLEKHA2
MRPS15
NFAM1
H4C4
TNFRSF10A
RASIP1
IZUMO1
KANSL3
FER1L5
BORCS7
TNFRSF1B
SRF
ZNF846
PTEN
KLLN
MYO18A
CPNE5
LZTFL1
SPN
DOCK2
MAPK12
NTSR1
NEURL2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
RNF149
DGKZ
FKBP5
LRRK2
METTL25
CCDC59
BANP
SKIDA1
TCAP
PNMT
SP1
RIOK3
FRAT1
NIT2
EP400
GTF2IRD1
MIDEAS
LMNA
TCIRG1
TTYH3
DYRK1A
BRI3BP
EPS15
HOXA3
SNUPN
GPX4
NR4A3
MAFG
CACNA2D4
C3
HSP90AA1
PFKFB4
CDCA4
PPIAL4F
PPIAL4E
PPIAL4D
UCN2
ZNF76
ZDHHC4
NAA38
NFIA
LSG1
PLXNB2
TMEM88
TNFSF14
CYB5D1
FTL
AFF1
ATXN2
TXNDC5
SC5D
CUL2
DRC7
KCNE1
DUSP6
IFRD2
DMAP1
KLF10
MIEF1
UCP2
C5AR1
NLRC3
NDUFS7
ING1
UBR4
MAP1LC3B2
TMIGD3
FAM214B
ADORA3
NYX
DHX33
VDR
FCRLB
HAPLN4
H4C12
LTA4H
APBB1IP
SULT6B1
UHRF2
YWHAQ
PIM3
FBXO6
XCR1
BCKDK
SPRING1
RNFT2
ATP11A
ITGAL
UNC45A
HDDC3
PEX5
C15orf62
RDH12
RDH11
PLEKHM1
GDPGP1
CIB1
INTS1
SBF1
INPPL1
RWDD1
CNOT2
NUBP1
SH3BGRL3
TM7SF3
EVPLL
SREK1IP1
CWC27
GFM2
CHD9
TBP
PSMB1
STING1
HSD17B7
POLG
ENO1
CCNL1
TMBIM6
CLIC4
ZYX
FAM131B
CDC42EP4
AHCYL2
MFN2
SASH3
DNAJB2
RAB43
NOTCH1
TP53I11
SIGLEC7
RBPJ
KMT5A
MLEC
BCAT1
ZNF317
PRSS57
SMAD3
SCAP
ARHGAP27
TPD52L2
ABHD16B
TBL2
TRIM14
KDM3B
SIK1B
SIK1
ZNF750
CYTH3
SLC25A15
CLDND2
SLC39A11
NKG7
TNFAIP2
ADAM8
MAPK8
SAT1
DYNC1I2
HMGN4
VGLL4
FGD3
B2M
DNAJB12
MRPL24
KLF1
OGA
GCDH
FCN1
HPCAL1
ERLIN2
EIF3G
FZD5
COMMD4
RAD54L2
MRPS23
PGLS
THEM4
FBRSL1
FOXP1
PSMF1
VAV1
ALDH3B1
PTPN7
ZNF121
SETDB1
MTRNR2L10
OTUD7B
MAD1L1
RFFL
SCAMP4
ADAT3
SUCNR1
PGPEP1
MDM2
DAGLB
LFNG
NCOA7
CYB5R4
PEX14
DFFA
ARPC1B
PARP2
SLC35E2B
ZFAND3
ANKRD33B
LBR
SCGB1C2
SCGB1C1
PPP1R1B
PRDM10
PHETA1
PTP4A2
DUSP11
C2orf78
ZNF350
CCL3
KMT2E
WDR18
RNF139
RPL22
CXCR3
CRACR2B
OSM
PHLDB1
DLGAP4
PSMD1
THAP11
NUTF2
CENPT
TMEM41B
PHC2
NYAP1
EIF1AD
BANF1
GIT2
ANKRD13A
GGPS1
ARID4B
APOM
BAG6
STX18
SLC25A18
MTMR4
MFSD8
ABHD18
PA2G4
SYT7
IPO4
PLD6
CDC42EP3
NOTCH2
LSM5
AVL9
RBM7
C11orf71
CD63
EHD1
PPP1R15A
SH3RF3
PNO1
UGP2
TRIP4
FBXO46
GUSB
ANPEP
VAT1
RND2
RAB20
C7orf26
NTN3
EMC8
COX4I1
SUSD1
ST3GAL2
RIPK1
SH2D3A
RGS12
LNPEP
LRCH4
FBXO24
NMNAT1
LZIC
THRA
GLUL
STRIP1
TRIM38
LCP2
ARL6IP4
CFLAR
CLDN12
EXOC2
RASSF4
DGKD
ATP5MF-PTCD1
ATP5MF
RASA3
ARL8A
GBA
GTF2I
PHF12
GHRL
ZNF503
ERCC1
TES
ANAPC5
POU2F2
U2SURP
ZNF775
RNF130
NDRG1
SIDT2
DENND5B
NBAS
WT1
TOM1
PRELID3B
USP36
BSDC1
SATB2
TRIOBP
ARL5C
RHEX
UNC45B
RRP12
AZIN1
PGD
COL9A2
EEA1
TMEM167B
PDPR
SEMA4C
SYK
CAST
TMEM72
DOK7
KLF2
GLIS3
INHBE
RCOR3
ABT1
SLC25A39
CSF1R
SIRPB2
LGALS9B
FURIN
VWA1
SEPTIN2
HDLBP
CCDC130
RBP4
ZFP91
LPXN
ZNF609
ETV6
PROSER1
NHLRC3
RASSF5
REPIN1
DYSF
RAP2A
ZNF862
PRXL2B
HEXA
MKNK2
USP8
EPHA1
DNAJC16
CASP9
CCDC146
SLC25A16
TMTC3
CEP290
ARHGEF25
FUT7
MEF2B
KDELR1
GRIN2D
LPAR2
GPNMB
CSRNP1
PPFIBP2
SCAF1
RRAS
SF3A3
NEK2
ZNF652
SKA1
GTF2B
GAS7
ZNF577
MFSD10
FAAP24
CEP89
NUF2
ABCC11
LONP2
PEMT
PPP3CB
HMX3
ARSG
IL1R1
SLC16A6
PRCC
QPCT
GPR35
ARMC12
DRG2
DDX23
HELZ
WASHC2A
SLC41A3
NTNG2
EBAG9
POM121
ANKRD33
TFAM
UNCX
DOK3
SLC22A15
CCR5
C11orf24
CYP1A1
MRPS17