ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584310 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◣ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PSMD1
ZNF335
RABL2A
NME6
RABL2B
NUP85
CACTIN
MAPKAPK5
IPO13
VDAC2
VTI1B
POLR3F
DZANK1
NVL
HSPA9
PSMG2
CEP76
TAOK3
SUDS3
DYNC1LI2
FAM187A
EFTUD2
CCDC103
FRG2C
GOSR2
RWDD1
NUP205
LYRM4
FARS2
TBCK
AIMP1
SRD5A1
NSUN2
RPL21
BLCAP
REXO1
HADHB
HADHA
EXOSC5
BCKDHA
POLR2E
DUX4
MRPS7
GGA3
STAM
C19orf48
PES1
STAM2
NCLN
UPF2
ATP5MG
DCTN1
SKP1
ANAPC7
TSNAX
FARSB
ZNF576
IRGQ
TSN
SART3
ISCU
PNO1
COX7A2L
TTC8
ZRANB2
SEC61B
RABGGTB
PDAP1
BUD31
XPNPEP3
ST13
CAPRIN1
ZNF503
SMC2
PCBP1
TMED1
SF3B3
COG4
MRPL11
RBBP5
VARS1
SEC22B
HOXA4
PI4KB
SMPDL3A
NDUFA4
ACTR10
IQCG
RPL35A
PROSER1
NHLRC3
RPS27A
CLHC1
RPS23
ATP6AP1L
GOLGA5
SELENOF
HS2ST1
FZD8
EIF4ENIF1
SLC35B1
DPH6
LBX1
PSMD12
UFM1
OSGEP
APEX1
MRPS5
PAK1IP1
C6orf52
ADK
AP3M1
FGF19
RPS12
ANK2
NFKBIL1
DDX39B
ATP6V1G2
BABAM2
RBKS
SUPV3L1
USP1
APOM
BAG6
ARHGAP24
FAM104A
C17orf80
NEUROG2
HES3
ABCG2
ICE1
ARHGAP11A-SCG5
ARHGAP11A
TLE1
FOXP2
RPS29
LRR1
TM9SF1
TMEM120B
MYLK4
DBX1
SUCLG1
TLE4
EVA1A
LRATD2
NCOR2
FRG2
PTGES2
PCDH11Y
COMMD1
CCT4
PDE1B
TMEM14A
C16orf91
DCTN3
ARID3C
PIN4
OR6B2
NDUFA10
PAF1
MED29
SYNPO
RPL7
RDH10
TRIM71
ATOH1
PDZRN3
PDHB
ADAM18
BNIP3
PRUNE2
MSX1
KITLG
METTL11B
PRDM13
TPM1
WT1
HES1
CCDC200
PIM1
RGS12
VEZT
FGD6
FOXD3
RND3
LRIG3
TRABD2B
CCN1
PRDM12
TMEM107
KCNK16
PDHX
APIP
LRAT
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MRTO4
EMC1
USP17L20
USP17L22
SPTBN1
MEIS2
CD69
TPO
SH3BP5
STK36
RNF25
NEUROD1
DAPL1
ZFHX4
ID2
DTX4
TAF9
RAD17
AK6
IGFBP2
AGPAT3
CEP41
OAZ3
CDX2
ERRFI1
ZCCHC13
GALNT14
EIF2S3
HOXB3
HOXB4
SOX21
AGMO
C10orf90
FHL1
RBP3
PDE6B
HOXA3
SPACA1
SEMA4D
OTUD6A
NRARP
ZNF608
GPR176
PMAIP1
CTXN3
ID1
B3GALT2
NEBL
TRMT9B
RAI14
NEUROG3
GORAB
ATOH8
SEC11C
DHRS3
CACNA1D
CCDC88C
RSPH9
LIMK2
KIF21B
VAV3
PRRX1
CETN1
MXI1
TEX2
KCNK10
DMRT3
HPS1
HOXD3
NTM
TPRA1
IL17B
GUCY2C
PDE12
HOXA2
CNPY2
BAIAP2
SLC7A5
JAKMIP1
TLE3
PPP1R12B
CCDC198
ZGPAT
ARFRP1
TLE2
SKIL
HMX2
LMO1
SPIRE1
RARA
POP5
ACVR1
C1orf105
NXPH4
KLB
LRGUK
MTMR7
ELAPOR2
BFSP1
UBE2I
NEUROG1
OSER1
PGPEP1L
CEBPD
HOXC5
SLA
CDC73
CHD7
OR5A2
GTF3A
NUTM2D
PAM
DDX3X
NPAS1
TSPAN13
GSX2
REV3L
BICRA
SNRPN
MXRA7
FLVCR2
LRIG1
FGD3
GADD45GIP1
USP17L11
USP17L21
USP17L12
POU2F2
ERCC1
PCBD2
MNX1
ZNF746
PHC2
DLG2
PPFIBP2
PRRC2C
NEO1
TPST2
CLEC18C
FGFR2
CDH16
CRABP2
DMBX1
FOXP1
RGL1
SSBP2
ITIH4
MUSTN1
TMEM237
ST18
HOXC4
DMD
TRPM3
TTR
MRPL38
PHOX2B
RUNX1T1
ZFX
PPP1R3D
FAM217B
PLCH1
HDAC9
ST8SIA3
TBX3
USP17L18
USP17L19
CYP26A1
ZNF383
ID3
DSCAML1
GNG12
ZNF367
PREX2
METTL24
CLDN2
ELMOD2
TNFRSF19
RPN1
FMN2
GTF3C4
DDX31
USP17L15
SYBU
CAMTA1
MEF2C
RAN
FSTL1
ALKBH5
DONSON
SLC2A9
MEIS3
LHX2
SPCS1
GLT8D1
CNN3
TMPPE
GLB1
SLC39A14
RCOR3
HNF1A
CS
CHD8
MAB21L2
HPD
LMO2
FAM181A
KLHDC7A
GPSM3
PBX2
HNRNPA2B1
CBX3
CHMP4C
CLRN1
NR2F1
IPO11
RCOR1
NXT1
ZNF853
ARHGAP10
B3GALT5
QPRT
DLL4
PDPN
LIX1
MS4A4A
CASC3
TSPAN11
RARB
PCDH18
LIN28A
REC8
VSTM2L
VANGL2
KRTAP12-1
LGALS12
NEK3
LRRC10B
CCDC33
KMT2A
IGFN1
NRCAM
CLEC18B
CATSPERG
FAM162A
CCDC58
CPLX1
AXDND1
VOPP1
CDRT15L2
KIF26A
RBM39
CNTN1
MMRN1
ABAT
SH2B1
HRG
ARHGEF28
OAZ2
PHTF1
DDO
LMO3
SRSF11
LRRC40
FGF10
TRDMT1
GSTP1
DSE
TSPYL1
FGFR4
RASSF10
PRSS47
PAX8
DUSP2
KAT6B
GCSAM
MAD2L2
DRAXIN
SPOCK2
NBAS
CDH18
WBP1L
MECOM
OMD
GAS2L3
TXNRD1
BAHCC1
ADM
SOX6
SOAT2
IGFBP6
SH3BP4
DUSP4
PEX2
ANKRD6
ID4
SIRT4
FRS2
FAM107A
PROS1
JUN
TP53INP1
MTRNR2L1
WDR74
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SPATC1L
ARID3B
MAMDC2
NFE2
IER3
FLOT1
NDUFS7
ZP4
DPP9
SP2
LEFTY2
SPATA25
CTSA
BBS9
TRIP10
GPR108
DNAJB7
NEURL2
TTI2
H2AW
HOXA1
DUSP6
INSM1
CDCA7L
ASB2
TEPSIN
NDUFAF8
ANKLE2
DNM2
PCGF1
LBX2
COL23A1
TBX2
P4HB
MLEC
FBXO31
MINDY2
TMEM70
ELOC
ANKRD28
SP5
RPS10-NUDT3
RPS10
SMAD3
CLGN
DLX4
LPIN1
HUS1
NPAS4
MRPL34
PDE4D
ZFHX3
DOLPP1
STX18
RAB5B
KANSL3
FER1L5
ARRDC4
RXRB
PGK1
UPF3A
XKR7
HSPA1B
ATF6
SLC39A7
NELFA
CBFA2T2
OTUD7B
KATNB1
RBPJ
PPP6R3
RPS24
POLR3A
KDM6B
LZTS1
PANK2
TRIB1
FRA10AC1
CCDC174
SNX16
SQSTM1
TMEM101
CLCN3
ABHD2
BCL3
GPCPD1
NINJ2
SMARCD2
GATA4
RARG
MFSD10
MTMR4
ABCC10
TOP2A
KCNAB2
KDM2B
ZNF687
ZNF718
ZNF595
SACM1L
PCGF2
NBPF1
ARSG
CCNL2
NRL
MUC3A
MRPS31
PSPN
ALKBH7
SMG6
CNOT2
DYNLT1
HEXIM2
MIDEAS
FURIN
RFX1
ITGAV
ADAP1
POLDIP3
NUBP1
NFKBIA
PKDCC
STIP1
OSBP
EIF2AK3
PSMB3
ZFAND2A
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
PPCDC
KNL1
PCNA
IQSEC3
GADD45G
PSMD6
SOD2
ATP5F1B
TRIM41
RNF207
PXYLP1
NR2F6
AHDC1
RBBP7
KAZALD1
MDM2
ABHD8
SLC45A4
KMT5A
LPCAT3
HMGCS1
AGO1
KDM8
JUP
CSF3R
RHBDD1
NLK
SMIM20
POLG
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
PRDM10
NCOA2
GPC6
RAB11B
G3BP1
SEPTIN9
B4GAT1
LIG3
MYRIP
GLRX5
MACROH2A1
GRSF1
DLC1
CRLS1
CCL26
MBD6
DDIT3
RBFOX2
TPCN1
TLE6
FAM107B
TRAF7
HNRNPD
SREBF1
DDA1
FAM72C
CITED2
SHF
TMEM94
SPG7
GADD45A
TRIM46
PLEKHG2
MIDN
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
FST
PKN2
CCDC43
PRMT5
KDM3A
ANTKMT
DAGLB
RGS3
EIF3D
INAVA
ACYP1
SSBP4
LCK
FAM167B
STAP2
MYEOV
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZBTB18
ARID2
ZFP36
SLC30A4
PLEC
CYP51A1
ARAP1
CBX5
STX1A
ABCA4
TLN1
CREB3
H3C12
H2BC17
H2AC17
COX5A
SH3YL1
ACP1
MRPS28
ATP6V1E2
HOXC6
ANKMY1
SERPINE1
RAB37
TCF7L2
GMEB2
FRMD3
UGP2
LTBR
HNMT
EIF4H
HMGB1
NKD1
CNKSR3
ARID5A
ARHGAP4
CAPNS2
BRMS1
EVI5L
KIAA0319
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
ILF2
RNF166
GATD3B
GATD3A
DNAJB3
LAPTM5
CIC
SNCG
MMRN2
FAM72D
CDS2
PRKACA
TDRKH
HOXB1
MBD2
SYNJ2
DIABLO
CMSS1
LNPEP
CSRNP1
LIMA1
PLAGL1
IFI16
RAC1
PHETA1
LFNG
ARID4A
INAFM2
TXNDC11
LUC7L2
ZNF414
PNKD
FAM72A
SEC14L1
EVPL
SYTL3
HTR5A
KCTD7
IKBKB
ZNF76
WTAP
UBE2F
ARL8A
ROGDI
MSX2
TUBB4B
CXCR4
MT2A
CERK
ANKRD1
AIFM2
COMTD1
IQGAP2
SLC35A3
TCTEX1D4
BTBD19
SORBS2
TIGD1
EIF4E2
LRP5L
INSM2
IL6R
USP42
DUSP9
NRM
C12orf73
NRSN2
TUBGCP3
CFL1
RNPEPL1
LAMP1
RNF149
NR2C1
RNF34
CCDC88A
GOT1
ZNF77
CCDC88B
NRXN1
CDK6
USPL1
RASSF2
UACA
NCOA7
BHLHE40
SH2D6
H6PD
CR1L
NEDD9
EPM2A
SH3BP2
KLHDC2
PAX6
TMEM60
PHTF2
ING1
LMNA
PIKFYVE
IRF9
PIGV
USP3
CBX4
ZDHHC4
EIF1B
CPSF4L
ZNF3
KRI1
CDKN2D
NCBP2AS2
NCBP2
RBM15
KLF6
CCL16
ZNF827
LRCH4
FBXO24
CRKL
NHLRC1
OPRM1
SEMA5B
TRAF4
SLC25A19
SCAP
TRIM7
TES
ORMDL3
ERI3
GPAA1
EXOSC4
PC
YTHDF2
NKX1-1
MYADM
ANKS4B
STX16
NKIRAS1
TSPAN4
POLR2L
METRN
TF
MARCHF3
CLK1
INHBE
RXRA
CDC42EP3
GFOD1
TCHP
ICAM1
E4F1
SRSF2
MFSD11
POLR3E
ENO1
NFE2L1
PARK7
NANP
CXXC5
CEBPE
TACC1
KPNA4
HSP90B1
CYB5R4
POLR2J3
PCTP
UNC13D
PXMP4
FAAP24
CEP89
ANP32E
HECTD4
ATP2B2
MPND
ATG16L1
ZC2HC1C
TUBB
TTC30B
GPT2
C14orf93
UBE2C
RNF144A
CCDC114
SULF1
SRCAP
LOC730183
KCNH7
MVD
DGKZ
TOMM40
MPC1
IRS1
PACSIN2
PAQR8
GBA
BRWD1
GPR35
UGT1A1
L1CAM
LASP1
DDX1
ZCWPW1
MEPCE
LMO4
GGT1
TRAF2
GPATCH8
SNX1
CIAO2A
HNRNPC
PKM
ATP23
ATP5MC1
UBXN10
TBL1X
MPV17L2
CELSR3
TCF4
ETV4
TANK
ALDH4A1