ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814860 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◣ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
TBX2
EIF3D
DLG2
ABCB1
RFPL1
PDE3A
ST6GAL1
PCM1
HTR3B
FAM162B
EGLN3
PPP1R12A
SYBU
KCNK16
HIGD1C
SMAD1
MFSD6
TBX3
PSME3IP1
SEMA5B
SLC37A3
PTPDC1
PMFBP1
TEX101
PDZRN3
STARD4
DIABLO
TTC30B
CBFA2T2
ENOX1
NRSN1
PIK3C2G
FRA10AC1
ALKBH8
KIAA0319
TMOD1
APLP2
TRIM41
ASB6
LINGO2
DAOA
VIP
SLC10A4
AOPEP
ABCC11
IKBKB
ARHGEF28
MTRNR2L2
MSH3
DHFR
ABCA12
KPNA4
MYT1L
ANKRD28
DYNLT1
KLHL1
CERK
CAPNS2
CNKSR3
GRK5
HTR4
AFF3
IGFBP5
ZNF148
NRCAM
LNX1
FAM228B
PFN4
LSMEM1
SRGAP2C
SRGAP2B
PSMD6
FAM160A1
GPR19
ZZZ3
CASD1
ERAP1
CAMSAP2
STX18
SCHIP1
CADM2
TNFRSF19
DRGX
FGF20
RUNX1T1
SYNPO
CXCR4
HS3ST5
DEFB130B
DEFB130A
AOAH
DGKB
SEC22B
ETS2
EPYC
PTPRR
RGS7BP
ZBTB18
FBXO34
ZNF335
CNP
CLCN3
POF1B
HECW2
RAPGEF2
FRMD3
COMTD1
SH3BP4
MMP7
SRPK2
ATP6V1G3
RAMP1
CRYGB
KIF1A
HNMT
MYRFL
HDAC9
SHLD1
CDH18
HOXC4
HOXC6
ABRA
CPXM2
AGTR1
TTI2
NEFL
DNAJB8
GPR88
DCLK3
MTRNR2L8
SCML4
PELO
ITGA1
PRSS12
QPRT
B3GNT4
FILIP1
DLC1
POLR2E
SGK1
TJP2
FBXO7
TRIM7
OR5AR1
COL21A1
CRISPLD1
UBL4B
RARB
SORBS2
ZNF804A
ATP5MG
DPYS
PDE4D
PC
C6
PCDHAC2
SLC35A3
WDR19
RMDN3
C1QL3
MYH15
MRTFA
IMPG2
RP1L1
VAV3
KCTD7
PXYLP1
RBM20
CLDN12
DUSP6
SPATA7
BMPR1B
GNL2
GRWD1
RABL2B
BIN1
HAPLN2
RPS29
JRKL
CCDC82
GABRR1
SART3
ISCU
CARS1
GJA5
NOMO3
THSD7A
HMGCS1
GPR22
NOMO1
LIMA1
C14orf93
ZFHX3
TRIL
FGL1
LMNTD1
UFM1
OTOR
ADAMTS18
ADAMTS19
PAM
METTL22
KBTBD11
SLC22A23
RWDD1
EXOSC5
BCKDHA
GPR68
CYP26A1
ARHGAP24
DACH1
PTGER2
RBM15
RABEPK
TYRP1
MTRNR2L1
SHC1
CKS1B
FLAD1
LIFR
CDK6
CYB561
CYB5B
PHC2
PHOX2A
FAM124A
ABHD2
DIPK1A
MMRN1
IQCG
RPL35A
ST3GAL6
TMCC1
CKMT2
RBBP5
LMO3
C2orf83
MGARP
SNX6
OPRM1
NRP1
GCSAM
GOSR2
RIIAD1
CELF3
DCN
DAB2IP
HNF4G
TAOK3
SUDS3
NME7
BLZF1
CDIN1
PRKAG2
RPS12
TNFSF18
SLC25A30
PRRT1B
NFIA
GPR162
NUBPL
MMP15
LRRC69
CPO
COX7A2L
TCF4
WDR31
CHRNA9
MDFIC2
GTDC1
HSD17B12
PSMD12
AMBN
ATP11A
ANTXR2
SEC61B
PLAC1
DNAJC12
CLDN11
HAO1
B3GAT2
GPER1
FOXP1
RPS23
ATP6AP1L
RBFOX3
PES1
STOM
P2RY12
SMAD9
JUP
POU5F2
TIGD6
HMGXB3
SYT15
LOC102724488
TTC30A
FAM219A
DNAI1
TSNAX
SMIM3
ATF1
GLYAT
PRLHR
BRD4
TVP23C
FGF13
ANK2
IQSEC1
NBN
TMEM265
PSTPIP1
PRR16
FARSB
TES
KCNK2
RBFOX2
LIMS1
DEFB131B
FAM187A
EFTUD2
CCDC103
TMEM107
GLIPR1L2
ELAVL4
EVPL
NUP205
PLA2G4E
BLCAP
RAPGEF1
ICA1
POLR3F
DZANK1
ABAT
MYO18B
CCDC182
SOX5
PLAC8L1
GLDN
SLC6A2
NOMO2
LOC283710
RNF19A
ZNF608
DNAH8
PFKP
PKIB
COL3A1
MGAT5
STARD13
DNM3
TECTB
OR10R2
LYRM4
FARS2
TTC39A
FGF1
NCOA7
SRD5A1
NSUN2
KIF26A
CACTIN
C19orf48
ZFPM2
SLC26A7
OTOGL
TPD52
G3BP1
THBS4
BFSP2
CFAP100
SPOP
CRYGC
NRXN1
MSRB2
FRMD6
UBA5
CHD1L
PRKAB2
LPIN1
HTN1
CDH12
PDE4DIP
AGR3
NGB
FBXO8
CEP44
SCG5
TBPL1
FAM104A
C17orf80
KCNV1
SLC22A8
LIG3
WDR74
RIMS1
NUP85
SYTL3
NELL1
RPL21
CTBP2
ADI1
TSHZ1
NVL
ANAPC7
FCER1A
GAST
POU4F2
UQCRQ
GDF9
RNF145
PPP1R12B
GLCCI1
TRMT2B
LEPR
TRIM55
HEXB
TRDMT1
RARA
THNSL1
MARCOL
MAPK1
BCL2L13
THEMIS
SYT4
ZNF77
SRGAP3
LMO1
CALCA
ANO3
GAB2
PGBD3
EXOSC8
ALG5
DHRS3
PSPH
CCT6A
CDAN1
PSMD1
PDAP1
BUD31
TRPA1
SPAG9
ERBB4
ADK
AP3M1
SPATS1
IL17F
SETD9
KRT19
GADD45A
SYT2
TVP23B
SLC17A2
HHAT
TOX
MRPL11
HABP2
BRSK2
TRAT1
HSPA9
PLXNA1
SLC18A1
PPM1E
PI4KB
ZFHX4
FAM163B
MTRNR2L9
BCAS1
ACKR4
OAZ3
UPF2
SLC6A5
EYS
SOBP
SNAPC1
PRDM7
SNX22
PCSK1N
CREB5
PRRT4
SUPV3L1
GOLGA5
S1PR2
KRT15
NFASC
ST6GALNAC5
ANKDD1B
TBC1D23
LMO4
MYT1
C1D
STK36
RNF25
NEDD4
SLC25A44
LRCH2
MRPS7
GGA3
SMIM28
KCNJ6
NECAB1
LRRTM4
RSPH1
TNIP3
NFKBIL1
DDX39B
ATP6V1G2
DTD2
MEI4
LAPTM4B
TMED1
DCAF5
SMIM14
TTC9B
ACYP1
CYP51A1
GPR83
SDCBP
MAP3K3
SVOPL
DDAH1
SLC7A2
SF3B3
COG4
NUMB
CILP
TRIB2
IL24
SHD
CHRDL2
HOXD13
HOXD12
PARP14
OSGEP
APEX1
HORMAD2
CAVIN4
FAM135B
TRIM24
ABR
CCDC68
SLC23A2
DYNC1LI2
RPS7
KIF2B
DEFB136
TOMM70
LNP1
CNKSR2
TMTC2
B4GAT1
BRMS1
CLDN8
ANK1
IFT80
ESRRG
PCGF1
LBX2
RHBDD1
FLVCR1
PCDH15
B3GNT3
PAK1IP1
C6orf52
TLE4
SLC41A3
RIMS2
SULF2
PACSIN3
THEM5
TAS2R50
CDC42EP3
VDAC2
SH3TC2
WDFY3
HTR2B
SETD7
OIP5
NUSAP1
MPP4
WBP11
C12orf60
TXNRD1
RFLNA
CSMD3
BEND4
RABL2A
KLHL24
NOS1
CLIP4
PLSCR2
MCU
PWWP2B
ANKRD44
SSUH2
VWC2L
KIF25
IRF6
BCO2
EEF2KMT
DCLK2
AGPAT4
HHEX
ATP11B
TRAF3IP3
SMAD2
DLG1
PNP
TUBB8
TMEM108
C12orf56
VPS33B
PELI2
CXorf65
CCNB3
AKAP4
VTI1B
EIF3G
TRAPPC9
SLAIN2
ARID5B
TMC3
GPM6B
PRUNE2
SHMT2
GYPB
DAZAP2
FAM72A
ATXN1
KCNJ16
SMUG1
ESRRB
BOC
BAZ2B
GNRH1
IGDCC3
GALNT14
OMD
SRSF7
ACTR10
STAMBPL1
TMEM229B
KIF6
SLC9A9
TIAM2
GC
PRDM8
STEAP1B
ZBTB20
KLF7
FOLH1B
KTN1
APOM
BAG6
KLHL6
NDUFA4
PABPC4L
SSPN
RNF111
ZNF235
PDZRN4
MKRN3
CLCN5
GUCA1C
REXO1
RHOB
VEZT
FGD6
TNPO1
FAM184A
GUCY1A1
PSD3
UGP2
GABRA1
NT5DC2
SLC12A3
FTCDNL1
ZFPM1
OLFML1
PHACTR2
SMC2
IRS2
BAMBI
CHST1
PIN4
CDO1
RIMBP2
AP3S1
CTXN2
SUCNR1
DMXL2
CDH4
PBX1
GLRX
WDR49
CYTH3
FYN
PDE4B
SHC4
HEXIM2
BICRAL
TBCC
FGF19
TSPAN8
RBM11
SLC19A2
MTUS1
EGFR
RNF34
TYRO3
ECT2L
TCERG1L
FAM163A
GRIP1
TESMIN
C7
RAB27A
HADHB
HADHA
SLC12A6
DCTN4
IL13RA2
SUCLG1
SPATA25
CTSA
NEURL2
CNOT8
FAM9B
PPP3R2
MAP4
CCNI
CMSS1
IRF2BP2
PHOX2B
GPR1
SRSF2
MFSD11
SUMO4
PTPRO
GPR75-ASB3
GPR75
SLC31A2
TAF1A
DOCK10
PHF6
ODAM
SCRG1
MAPK10
TOM1L1
DPYSL3
PTPRH
ZNF792
ZMYM1
ARID3B
SLC35B1
CDCA7L
CDK14
TUB
HTR3D
TPM1
AFF1
PLPP4
BBS9
HSD17B4
ABLIM1
HTR3A
MAPKAPK5
TBC1D9
GAS2L3
SAMD13
LUM
STAM
PCNX4
MAST4
METTL7A
JMJD1C
ZRANB2
OSR1
RNF217
MTRF1
HIPK1
NAA16
FGF14
TFPI
CDK8
CROT
RFX8
C18orf32
HAPLN1
PACRGL
MLLT11
CDC42SE1
CD46
SOCS5
OXCT1
DMD
GNPNAT1
PUS7L
IRAK4
ADGRD1
VSTM2A
C8A
MAGEB10
RBP1
SIRT4
SKP1
HMGCR
NCAM2
SACS
CALHM5
NREP
OSBPL7
PLCH1
CHODL
ETFRF1
CFAP94
CCKAR
RAI14
ARRDC4
RAB3D
SRP14
TMEM205
CCDC159
RABL3
GTF2E1
C5
PCNX1
PALMD
KHDRBS3
ALDOA
MAP2
RABGAP1L
ZBED3
ZNF8
CLSPN
DEGS2
RPS24
POLR3A
GPSM3
SIAH1
PBX2
PLCL1
TSHZ2
TNFSF13B
MLH3
PRCD
SLC8A1
TM4SF4
EPB41L4B
CLGN
KCNAB2
FAM222A
FAM178B
TMEM270
CAPRIN1
SGK3
PKD1L1
NCDN
KIAA0319L
FITM2
APOH
WNK1
RNF38
PAPOLB
OR8B4
ASXL2
POP5
ZNF75D
ZNF449
FNIP2
ARHGEF12
KCNH2
ATXN7L1
SLC4A8
GALNT6
EFCAB2
MBNL3
PALM
SLC25A12
TAMALIN
TMEM187
HCFC1
TLE3
ANKRD1
RWDD3
SCG2
DUX4
MECOM
NEK7
USO1
HAND2
PROSER1
NHLRC3
GDF5
CEP250
TCIM
MYF6
MYF5
BANK1
NRG2
SPR
MEF2C
FHL1
TOB1
NEDD4L
BCL9L
NRG1
H1-2
IMMP2L
ELAVL2
HMX2
ACOT11
ADD3
BABAM2
PTPRE
PNO1
L1CAM
MXRA7
FAM110B
CD74
COPB2
PHACTR3
DGKK
CREB3L2
SNX16
BPNT2
SULT6B1
SPATA9
RHOBTB3
IGFBP3
CD36
SLC28A3
LSM11
MACROD2
MGP
LCA5
POU6F1
SUPT20HL2
KLHL13
P2RY6
FEV
ARHGEF33
PRRC2C
AGBL1
GFRA3
ATF3
HEPHL1
PSMA8
TBCK
AIMP1
XPNPEP3
ST13
MOB4
C16orf91
GORAB
OSBP2
OSBPL8
FMNL2
ADAMTSL2
GSE1
ZDHHC2
OR5K2
SLC17A8
RPL7
RDH10
GSTP1
TMEM182
RGS13
HEATR1
NCOA6
ARHGAP19
RAG1
SOAT1
RIPOR2
ARHGAP21
PFN3
MYO1B
BACH2
ERP27
CAAP1
EIF3A
EMC2
POPDC2
APELA
ASB15
GRAMD1B
TUBB8B
ATP6V0E2
FRG2C
PDE12
IGFBPL1
ZNFX1
MAOB
LPP
TTC13
ARV1
CASQ1
LRIT2