ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671314 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◣ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
MTRNR2L1
MTRNR2L2
MSH3
DHFR
POLR3E
SNX16
SHF
B4GAT1
BRMS1
PPP6R3
KNL1
DUX4
POLG
DPP9
SACM1L
FRG2C
TBL1X
PRMT5
DHRS3
FBXO31
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
GSTA4
COL23A1
TRIM7
NDUFS7
MACC1
C8orf37
PSMA3
PLXDC1
CCDC107
RAB11A
H4C8
FRG2
SOAT2
IGFBP6
MTRNR2L8
H4C12
ILF2
MTERF4
ELF1
WBP4
RPS29
NOP53
TRIM41
NCOA7
TIA1
RNASE4
ANG
BORCS6
MCRIP2
METTL26
TTI2
SMARCC2
BCAR3
IER3
FLOT1
NME1
SIRT4
STX16
SNAI2
RAD54L2
STAT6
PXK
CSRNP1
PCGF2
PSMB3
NUF2
HMGN4
TMEM242
DUSP1
FTH1
LTBR
SCNN1A
GTF2H2
PPEF1
RS1
MTF2
STRA6
HSPA6
MYNN
ACTRT3
ISLR2
OR1F1
YARS1
S100PBP
NFE2L2
CASC3
POLDIP3
H4C14
DRAP1
C11orf68
EIF2D
ATXN7L2
PHLDB2
MUC3A
DDIT4
SERPINE1
HES1
OR2T1
ZNF839
CCL20
FRA10AC1
TACO1
H4C15
FAM227B
DTWD1
MED23
RPL37
TPCN1
ZNF827
MRPL40
HIRA
HIF3A
CCNL1
TES
ZBED9
CNN2
TMEM259
TEFM
CCN5
WDR24
SNX18
ARID3B
MED16
METTL15
KIF18A
BCL3
SAR1B
TNPO1
LRRC37A3
SMARCD2
ANP32E
JUNB
USP30
RBFOX2
TRIB3
RUVBL1
EEFSEC
SGCA
TRIP4
SLC44A1
C19orf53
RNF207
UPK2
KRT6A
NUP50
MRPS35
HSPA5
EIF4A3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SPIDR
ATF3
TRIB1
SOD2
WTAP
CPEB3
C7orf65
BAZ2A
TSFM
MRPS31
DCP1A
FZD2
NPIPB6
PSMF1
SYS1
ACSL1
SLC9A1
ARID1A
R3HCC1
ART4
POLR3B
TOB2
KRT8
MAT2A
OPA1
IARS1
WDR36
GPT2
ARID5B
EPB41
LTF
LRRC59
INO80C
TXNRD1
TOP3B
KANSL3
FER1L5
PECAM1
GADD45A
MRPS15
ANO10
ABHD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
FKBP5
GTF2H2C_2
GTF2H2C
ARMC12
TMEM41A
H4C4
IQSEC3
CDKN2AIPNL
H1-2
SNRPE
CAMK2D
MRPL21
IGHMBP2
DCAF10
INTS12
GSTCD
PLEKHG2
CALM1
MKRN3
MYBPC3
ZNF296
GEMIN7
CD8A
COMMD2
JUN
NR1H3
HES7
KLF9
GTF3C3
ACP2
ALOXE3
GABARAPL1
LASP1
NDUFC2-KCTD14
NDUFC2
PLIN3
C12orf73
S100A2
SOST
RGPD8
RGPD5
RGPD6
DCLRE1B
AP4B1
ABT1
NUP54
C17orf75
PHACTR4
SNAP47
JMJD4
NANOS3
EPB41L4B
HTR5A
GBA
ATF1
DMAP1
C8orf33
AMTN
TEX46
KDM1A
SPRED2
EIF3F
TMEM107
PCBD2
ARL8B
PRKCE
STX18
BCAR1
TAS1R1
NOL9
PLD1
ZSCAN22
ITGB3BP
EFCAB7
PEX3
ADAT2
ZMYND8
PROSER1
NHLRC3
DDX1
CALM2
CEBPB
BEST1
SH3BP4
ATP5MC2
SF3A3
TRIM55
PDE4D
EEF2K
GRIK4
STAG1
HMGB1
USPL1
KLF7
SPSB1
ANKRD39
TMEM132A
CTNNA3
CELSR3
RHOT2
BTG2
TAMM41
IGSF10
MKX
DUS1L
INTS1
MAML3
ZNF212
NLE1
MRPL39
BCAS4
SMG8
DTNA
NABP1
SUGCT
MPLKIP
HOXA3
AURKAIP1
OR1J4
MIDEAS
TIMMDC1
COPS7B
PDE6D
LDLR
WDR97
MAF1
STK40
TEKT2
ADPRS
FAN1
NSUN4
SRSF2
MFSD11
CCAR2
C8orf58
TARS2
LSMEM1
HINT3
LSM12
G6PC3
RBBP5
ARHGAP24
TMEM248
TRIM8
UQCRH
LRRC41
ARHGDIA
POMZP3
POFUT2
LRFN3
SSBP2
PPARD
MTLN
TBC1D19
C18orf63
SIAH1
ATXN2L
PPARG
NFKBIA
AHDC1
H4C11
MAD1L1
TMEM167B
KLF15
FAM43A
FUCA1
CCDC33
SURF6
MNAT1
LTBP3
SCNN1G
RTN4
H4C3
H1-6
SEC31A
SETD7
ANKRD46
LAMTOR5
TRIOBP
ZNF609
ABCG1
VPS72
NPIPB9
ARID2
GMEB2
TAF12
ACOT7
ADGRF5
NBPF1
AHR
USP17L20
USP17L22
TGIF1
NSFL1C
FUS
WNT9A
C3
CFLAR
ZFP36L1
KDM4A
GFM2
TUBGCP3
BHLHE40
SLC25A45
FRMD8
KDM3B
BCAT1
VIRMA
TSPAN16
ZNFX1
DUS2
DDX28
UNK
SLC24A1
NOXO1
GFER
CTDSP1
STMP1
RWDD3
PIK3R1
LSG1
ZNF461
LMO4
PLEKHA6
SRRM3
SLC2A9
BCOR
MRPL1
MRO
ABCC10
TRIAP1
RBM28
C18orf21
RRP15
LIMD1
CCDC80
MRPS23
ZSCAN25
LOC100509620
SNX17
EIF2B4
CLK3
SLC7A11
ZBTB45
ITPRIP
MOB4
EIF4G2
FTL
TRDMT1
FAM228B
BCL9L
CCND1
ABHD12
NLRX1
GTF2A1
MRPL3
TAF3
SF3B6
AAR2
PPP1R1B
H4C7
H3C7
H2BC9
SLC7A5
CDK6
HIVEP2
SAMD4A
LPIN1
HSP90AB1
PGRMC2
H3C2
H4C2
PSD
FBXL15
VPS25
LFNG
AHCY
YPEL2
GPN3
FAM216A
GOT2
UBE2V1
SRRM1
KMT5B
STEAP1
SELENOH
NCF4
ERCC1
CDC25C
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
FAM53C
TBC1D16
MAZ
ZSCAN12
SLC33A1
RHOF
CRBN
MTHFD2
DIP2B
PPL
PSMD3
CLUAP1
C16orf90
PET117
KAT14
PAFAH2
EGFLAM
ETS2
STK17A
PPA2
KDM2A
SAAL1
BRD3OS
OXTR
MRPL44
PSMA1
GYPC
VPS36
PDE8A
CKAP2
SPRYD4
EXOC2
DDX6
MEF2C
ROR1
HNRNPD
CITED2
AARS2
TATDN3
NSL1
MTHFD2L
TTLL4
GALNT15
RXRA
TAB1
SSRP1
P2RX3
CA2
MECOM
MRPS2
C9orf116
VEGFA
ZNF843
LOC100505841
CSF1
KDM6B
BZW2
H2AX
AFF1
ANKMY2
RAPGEF3
SRSF7
MTREX
DHX29
TMEM184A
SLC25A21
B4GALT3
EGFR
CALCB
TCF7L2
DGAT1
IFIT3
CDKN1A
MTOR
IFIT1B
SLC25A3
TPRA1
ATF6
ARL6IP1
AMOTL2
ARRDC2
CXCL2
FAM72C
FAM72A
RAD50
SLC35E2A
NGLY1
NUFIP2
SMN2
SMN1
OXSM
YBEY
MCM3AP
PSCA
FUT8
LSP1
PTCD1
CPSF4
ATOX1
FAM98B
HNRNPA1L2
ARHGAP22
HUS1
NPAS4
ZDHHC4
HBP1
ARHGEF12
NDUFAB1
TMEM238
RPL28
TMEM158
CCDC200
EPN1
SDC4
SLC22A15
NKX2-5
C11orf49
UPP1
ZC3H10
RPL41
MTERF1
BTF3
SRGAP1
POMK
SLC45A1
TOB1
N6AMT1
PIK3R3
WDR11
MDP1
CHMP4A
FRG1
THOC5
NDUFS4
KRBA2
SMAD3
PIGV
IL6ST
ZC3H6
SRP9
PUM2
MCOLN1
AMACR
DSTYK
MRPL53
WIZ
TM4SF1
XPC
LSM3
PFKP
LIMS4
CABIN1
RPS20
BRIX1
HERC3
PYURF
PIGY
ZMPSTE24
NQO2
ZFP91
LPXN
NDUFA12
PTPN13
PLEC
DDX19A
AGK
BBS1
OSMR
BRF2
OLFML3
CYP46A1
KAT2A
HSPB9
RAET1G
MYEOV
PACSIN2
CYCS
BMF
CXXC4
WDR31
NOL7
RNF216
COX7A2
SPATS2L
DACT3
APOL6
BDKRB1
CTNNB1
EIF3B
LATS1
COX19
PEX6
CNOT2
MAMDC4
UBL7
TRA2B
AVPI1
SRA1
MYL12A
MUC5AC
RPA3
METTL25
CCDC59
PARP2
DYNLL1
GBE1
MTMR2
TRIM52
NUP188
DOLK
ROS1
PMAIP1
HSP90AA1
TM2D1
CAMKK2
TERF1
SLFN5
NRM
PPP1R18
ZBTB9
SLC38A2
VRK2
FGF1
TAF4
CAMTA1
STAT3
FOXJ3
MALT1
TXNIP
ZNF721
PIGG
EIF4A2
ALG10B
SAMD4B
SLC37A4
ACSF3
SH2D6
IRF2BP2
FIGNL1
MSANTD3
PDE12
CIPC
SMIM3
NIPBL
SERTAD1
HEMK1
C3orf18
ABTB2
MRPS10
PSG4
PRR5L
PSG5
ERRFI1
USP42
PIKFYVE
PCMT1
ASH1L
ARL14EPL
POLR2C
GLIPR1L1
CAPS2
RRP1B
HSF2BP
SMG7
HAP1
HPD
UGP2
INHBE
PSMD9
RGS16
BTG1
LARS2
MTMR6
SDC3
KLRK1
TUBB4B
H3C15
H3C14
H2AC19
H2AC18
SOCS2
RPL10A
SLC38A1
ARMC5
BIRC3
FEM1C
MOGS
FNDC3B
CDKN1C
SNRNP48
MOK
FAM50B
SQSTM1
RAG1
BMS1
EDC4
PSMC2
DNAJC2
TRAF6
H2BC11
H2AC11
SLC9A3R2
CYP2R1
MCIDAS
NPW
TIGD1
EIF4E2
ATG16L1
ANGEL1
MOB3A
IZUMO4
AKAP12
IPO4
RNF6
CALD1
ADH5
TTC26
ZNF391
SAMSN1
KRTAP5-6
GGA1
TIMM44
EIF1AD
BANF1
PDE11A
MAP1LC3B2
RBM45
MORF4L1
GPN1
CCDC121
ZNF598
HIP1R
MAML2
PTPRM
COMMD1
ZNF3
NRP1
TGOLN2
LARP1
SEC11A
CXCL8
RPL7A
MED22
JRK
KIF21A
DAGLB
SH3TC1
MAPKBP1
SORL1
PPP4R3B
PRPSAP1
HNRNPAB
KAT5
SIK2
SLC39A4
CPSF1
ZSCAN9
SNRPB2
FXN
B3GALT4
RPS18
VPS52
POC1B-GALNT4
POC1B
GALNT4
TSR3
GNPTG
F2R
OR14K1
CCDC88A
NOTCH2
DPY19L4
MKRN2OS
MKRN2
EML2
UBA2
IP6K3
PPP1R12A
DIAPH1
SEC13
BANP
HEXB
CCNC
MTIF2
KIFC1
SYT7
WASHC2A
INSR
DISC1
TACC2
PEX14
DFFA
SYNRG
EIF3G
NOP56
LPP
ERCC6L2
YWHAG
NRF1
KIF5B
DYM
VAMP1
ZER1
KIAA0754
PARL
PRDM1
MAN2C1
NQO1
TAF10
XRN2
NDUFB1
CPSF2
CEBPD
MICALCL
SH2B1
DUSP6
STARD13
PSMG3
WDR70
MAGOH
VWA8
ELAVL3
ABCC3
NOTUM
ZXDC
VPS4A
CEBPE
TANK
YIF1A
TMEM151A
ELMO1
DUSP10
HDAC2
ZBED3
SSBP1
SUPT3H
MRPS25
SETD9
CACNB3
CHMP1B
SEC14L5
GALK2
COPS2
NSRP1
NRL
FBXO46
PCK2
TAGLN2
SUMF2
KMT2D
RMDN2
SLC27A4
ZDHHC6
VTI1A
TMEM156
SPATC1L
ADGRL2
FSTL3
CDK5RAP1
MARCHF6
GPAT3
PRICKLE4
FRS3
TM4SF4
ZNF579
H2AW
MAPRE2
MAP4
KLF10
DGCR8
DPH7
NEURL3
CSTA
COX16
H2BU1
HES3
TMEM101
PKM
ANXA2
MRPL12
EIF3C
DNAJC25-GNG10
DNAJC25
ZFP36L2
FSCN1
SCAMP1
IL20RB
RET
EPHB3
ELANE
CELSR1
CBWD5
RBSN
RANBP2
SLTM
H3-3A
QSOX1
NOL10
SLC7A2
DLC1
CCDC88B
STMN3