ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671297 | NAMEC8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◣ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
MTRNR2L1
LAMA5
DUX4
ZGPAT
ARFRP1
TGM2
IER3
FLOT1
SOAT2
IGFBP6
MTRNR2L2
MSH3
DHFR
BIN1
SNX16
ABCC10
KNL1
TMEM107
SHF
MYEOV
ERCC1
POLDIP3
TTI2
ITGB2
ITGA5
LTBP3
MIDEAS
PDE12
TRIB1
PLEKHA7
GSTA4
BORCS6
TRIM7
HIF3A
GPR39
POLG
POLR3E
CCDC107
SPATA25
CTSA
NEURL2
UPP1
USP2
ACYP1
ZC2HC1C
PRMT5
PIKFYVE
STX16
DPP9
VGLL4
LTBR
SCNN1A
DUSP1
SMAD3
FRG2C
PPP6R3
TSPAN4
POLR2L
TCTEX1D4
BTBD19
MEAK7
H4C8
RGS3
RPS29
HES7
ALOXE3
LTA4H
NDUFS7
SH2B1
TRIM41
C8orf37
RXRA
SACM1L
RAB11A
PSMA3
MTRNR2L8
PLXDC1
CLCF1
PRR7
ZNF367
WNT9A
FHL2
SIRT4
LUC7L2
FMC1-LUC7L2
FMC1
KLRC3
CD14
CCND3
TAF8
STX1A
NFKBIA
JUNB
CCDC88B
PHC2
B4GAT1
BRMS1
SH3BP4
HMGN4
GPRC5A
TINAGL1
IL6ST
VASN
ACSL1
TRIM55
H4C3
H1-6
CCL20
C11orf86
ANK1
IL34
ILF2
RNF208
CYSRT1
RNF224
BCAR1
DDIT4
MED16
FRG2
PTPN6
C12orf57
MXD4
LAPTM5
PKM
H4C12
HSPA6
MUC5AC
RNASE4
ANG
PSCA
APOL6
NUF2
NIBAN2
SMIM3
MFSD10
KLF9
UBC
LY6K
PARP2
SCAND1
MICALCL
EPM2A
PC
FBXO46
AMOTL2
ASB2
CD63
RALGDS
N4BP2
ENAH
IGF2BP3
MAP1LC3B2
RARA
PHLDB2
ZBED9
SYS1
SLC41A3
PCGF2
PSMB3
ABHD2
DLC1
ELOVL6
CCN5
NCOA7
NRP1
TCF7
SNX8
CCDC200
TAF9
RAD17
AK6
NAA38
DTNB
LOC100509620
PER1
AJUBA
CHD3
STX10
IER2
ITGA3
SMIM29
SEPTIN9
TTC39C
METRNL
NADK
H3C15
H3C14
H2AC19
H2AC18
FOSL1
NEDD4L
GALE
TMEM40
MCRIP2
METTL26
NDST1
TAGLN2
H4C11
ANXA11
GIP
C3
SPAAR
HRCT1
GFOD1
S100A2
ZFAND3
DUSP10
IL20RB
SEC22B
CETP
SQSTM1
SREBF1
TNFRSF6B
RARG
CDC42EP1
GPX4
JPH2
MT2A
NQO1
ARHGAP22
RGS2
KCNMA1
TANK
SLC22A18
ANKRD2
MAP3K14
GOLGA1
ARIH2
EIF4A3
C19orf33
H4C14
FITM2
MCHR1
H2BC8
H2AC8
TENT5B
KANK4
BNC1
OR2T1
RIN1
TES
ARL6IP1
TMEM184A
CNN2
TMEM259
NIPAL4
HM13
PLAU
CDK5RAP1
ATP13A2
LDLR
FBXO31
FLYWCH1
LTBP1
SLC45A4
EXOSC6
UBE2H
H4C4
NT5DC3
SBNO2
CDK13
CPA4
PNPLA3
IP6K3
PECAM1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
GOLGA5
TTC8
DPH6
IQCG
SUPV3L1
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
MED29
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
LRR1
NEUROG3
PDE6B
HES1
RARB
PIN4
OR6B2
NDUFA10
PTGES2
OAZ3
SUCLG1
UBE2I
HES3
ARHGAP11A-SCG5
ARHGAP11A
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
VEZT
FGD6
FZD8
CYP26A1
SPATC1L
ARID3B
SEC11C
MAMDC2
RPL7
RDH10
EIF2S3
GADD45GIP1
BICRA
SYBU
CDC73
HOXA3
NFE2
PMAIP1
ID2
C16orf91
ARHGAP10
RPN1
GORAB
GTF3C4
DDX31
ZP4
DHRS3
NEUROG1
ATOH1
NEUROD1
CNPY2
SP2
BNIP3
KAT6B
LEFTY2
ZNF383
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
TLE4
MRPL38
DNAJB7
TLE3
PHOX2B
SPCS1
GLT8D1
PDHX
APIP
H2AW
HOXA2
ST18
TBX3
ZNF746
HOXA1
DUSP6
INSM1
CCDC33
LIN28A
METTL24
CDCA7L
PCBD2
TEPSIN
NDUFAF8
ERRFI1
FGF19
ADAM18
ANKLE2
DNM2
TPRA1
PCGF1
LBX2
NBAS
FOXP1
COL23A1
RUNX1T1
TBX2
HOXB3
ALKBH5
P4HB
MLEC
PRUNE2
HPD
MINDY2
CS
TMEM70
ELOC
DLL4
ANKRD28
SP5
RPS10-NUDT3
RPS10
AXDND1
PDHB
SYNPO
CLGN
DAPL1
DLX4
LPIN1
HUS1
NPAS4
CAMTA1
ID3
TNFRSF19
ARHGEF28
MRPL34
PDE4D
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1
STX18
RAB5B
KANSL3
FER1L5
ARRDC4
RXRB
ANK2
PGK1
TMEM120B
ARID3C
DONSON
UPF3A
XKR7
HSPA1B
HOXC4
ATF6
SLC39A7
MSX1
CCN1
NELFA
PRRX1
CBFA2T2
SMPDL3A
OTUD7B
KATNB1
RBPJ
RPS24
POLR3A
KDM6B
LZTS1
PANK2
FRA10AC1
CCDC174
MYLK4
BAIAP2
TMEM101
CLCN3
BCL3
POP5
GPCPD1
PDZRN3
NINJ2
SMARCD2
GATA4
MTMR4
NR2F1
TOP2A
ID1
KCNAB2
KDM2B
ZNF687
ZNF718
ZNF595
USP17L20
NBPF1
ZFHX4
ARSG
CCNL2
NRL
USP17L22
MUC3A
FOXP2
SRSF11
MRPS31
QPRT
PSPN
ALKBH7
SMG6
CNOT2
DYNLT1
HEXIM2
FURIN
RFX1
LRRC40
ITGAV
ADAP1
NUBP1
PKDCC
STIP1
CNTN1
OSBP
EIF2AK3
ZFAND2A
TLE2
RASSF5
RNF103-CHMP3
RMND5A
DCAF11
ZNF608
LRATD2
PPCDC
PCNA
IQSEC3
GADD45G
PSMD6
SOD2
ATP5F1B
RNF207
PXYLP1
NR2F6
AHDC1
RBBP7
HNRNPA2B1
CBX3
KAZALD1
MDM2
ABHD8
KMT5A
LPCAT3
HMGCS1
AGO1
KDM8
JUP
CSF3R
RHBDD1
NLK
SMIM20
SP1
MALRD1
ANKHD1-EIF4EBP3
ANKHD1
RTN4
FTL
PRDM10
NCOA2
GPC6
RAB11B
G3BP1
LIG3
MYRIP
GLRX5
MACROH2A1
EVA1A
GRSF1
DSCAML1
CRLS1
CCL26
MBD6
DDIT3
SLC7A5
RBFOX2
TPCN1
TLE6
FAM107B
RGS12
TRAF7
HNRNPD
ARHGAP24
DDA1
FAM72C
CITED2
TMEM94
SPG7
GADD45A
TRIM46
MEIS2
PLEKHG2
METTL11B
MIDN
DLG2
SOCS3
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MTF2
FST
PKN2
CCDC43
KDM3A
ANTKMT
DAGLB
BFSP1
EIF3D
INAVA
SSBP4
LCK
FAM167B
NEK3
STAP2
HPCAL1
SLC6A12
NCDN
KIAA0319L
FGR
ZBTB18
ARID2
ZFP36
SLC30A4
PLEC
CYP51A1
ARAP1
CBX5
ABCA4
TLN1
CREB3
H3C12
H2BC17
H2AC17
COX5A
SH3YL1
ACP1
MRPS28
ATP6V1E2
HOXC6
ANKMY1
SERPINE1
RAB37
TCF7L2
GMEB2
FRMD3
UGP2
HNMT
ADM
EIF4H
HMGB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NKD1
CNKSR3
ARID5A
ARHGAP4
KMT2A
CAPNS2
TRDMT1
EVI5L
KIAA0319
CPT1A
ARHGEF10L
SMIM11B
SMIM11A
RHOQ
MRPS24
RNF166
GATD3B
GATD3A
CEP41
DNAJB3
CIC
SNCG
MMRN2
FAM72D
CDS2
PRKACA
TDRKH
HOXB1
MBD2
SYNJ2
DIABLO
CMSS1
LNPEP
CACNA1D
CSRNP1
LIMA1
PLAGL1
IFI16
HOXC5
TXNRD1
RAC1
BAHCC1
PHETA1
LFNG
ARID4A
INAFM2
TXNDC11
GTF3A
DMBX1
ZNF414
PNKD
FAM72A
SEC14L1
EVPL
SYTL3
HTR5A
KCTD7
IKBKB
ZNF76
WTAP
UBE2F
ARL8A
ROGDI
MSX2
TUBB4B
CXCR4
TRABD2B
CERK
ANKRD1
AIFM2
COMTD1
IQGAP2
SLC35A3
SORBS2
TIGD1
EIF4E2
LRP5L
INSM2
IL6R
USP42
DUSP9
NRM
C12orf73
NRSN2
TUBGCP3
CFL1
GSTP1
RNPEPL1
LAMP1
VOPP1
RNF149
NR2C1
RNF34
CCDC88A
GOT1
ZNF77
NRXN1
CDK6
USPL1
RASSF2
LRIG1
UACA
BHLHE40
SH2D6
H6PD
CR1L
NEDD9
SH3BP2
KLHDC2
PAX6
TMEM60
PHTF2
HOXB4
ING1
RAI14
LMNA
IRF9
PIGV
USP3
CBX4
NRCAM
PRDM12
ZDHHC4
CHD8
EIF1B
CPSF4L
ZNF3
KRI1
CDKN2D
NCBP2AS2
NCBP2
RBM15
KLF6
CCL16
ZNF827
LRCH4
FBXO24
CRKL
NHLRC1
OPRM1
SEMA5B
TRAF4
SLC25A19
SCAP
ORMDL3
ERI3
GPAA1
EXOSC4
YTHDF2
NKX1-1
MYADM
ANKS4B
NKIRAS1
METRN
TF
MARCHF3
CLK1
INHBE
CDC42EP3
TCHP
ICAM1
E4F1
SRSF2
MFSD11
ENO1
NFE2L1
PARK7
NANP
CXXC5
CEBPE
NEO1
TACC1
KPNA4
HSP90B1
CYB5R4
POLR2J3
PCTP
UNC13D
PXMP4
FAAP24
CEP89
ANP32E
HECTD4
ATP2B2
MPND
ATG16L1
TUBB
TTC30B
GPT2
C14orf93
UBE2C
RNF144A
CCDC114
SULF1
SRCAP
LOC730183
KCNH7
MVD
ACVR1
DGKZ
TOMM40
MPC1
IRS1
PACSIN2
PAQR8
GBA
BRWD1
GPR35
UGT1A1
L1CAM
LASP1
DDX1
ZCWPW1
MEPCE
LMO4
GGT1
TRAF2
GPATCH8
SNX1
CIAO2A
HNRNPC
ATP23
ATP5MC1
UBXN10
TBL1X
MPV17L2
CELSR3
TCF4
ETV4
ALDH4A1
PLEKHF2
CASC3
CALM2
ABLIM3
ETFBKMT
HSPE1-MOB4
HSPE1
HSPD1
LYL1
TMC6
PRR14
STARD4
KMT2E
SCYL1
TMTC4
HNRNPUL1
CBFA2T3
ADGRL2
FILIP1L
DUSP12
ARNTL