ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662634 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◣ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
SP2
TEPSIN
NDUFAF8
DOLPP1
DNM2
ARRDC4
OSBP
KATNB1
RAB5B
SP1
STIP1
P4HB
ZNF687
RFX1
NLK
ANKHD1-EIF4EBP3
ANKHD1
EVI5L
UBE2C
ACTL6A
TOP2A
GOT1
GLRX5
G3BP1
ARID4A
HSP90B1
STT3A
TMEM94
PXMP4
EIF2AK3
SKA2
PRR11
TDRKH
JUP
TCERG1
MPV17L2
ARNTL
SNRPF
ATP5F1B
PITPNM1
RBM27
KAT7
PRR14
ARMC1
HNRNPUL1
TMEM60
PHTF2
HSPA5
TMEM218
PRICKLE3
MYLPF
TBC1D10B
TUBB4B
DROSHA
C5orf22
H2AZ2
PGK1
MTMR4
ILF2
TRAF2
MSANTD4
ATP5MC1
TMX2
MED19
MVD
CIC
FLAD1
ZFYVE21
XRCC3
HNRNPL
PDK2
RECQL
GOLT1B
NCDN
KIAA0319L
CRIP1
TEDC1
SEL1L
HNRNPC
COQ8A
STAP2
MPND
CHCHD6
WDR97
MAF1
PSMD4
RFWD3
TOMM40
VIRMA
TOM1L2
DRC3
ANAPC5
MAMDC4
SERP1
EIF2A
SHC1
CKS1B
METTL17
FAAP24
CEP89
KPNB1
PSPN
ALKBH7
FAM72C
FAM72D
C16orf95
OS9
TMEM70
ELOC
EEF1AKNMT
FAM72A
SPSB3
NUBP2
TBCCD1
DNAJB11
KAT6B
TRIP10
GPR108
ZNF77
TARS2
KHSRP
SPAG7
ZSWIM3
ACOT8
SLX1B
SLX1A
BOLA2B
BOLA2
PRKACA
PPWD1
CENPK
RNF5
AGPAT1
PITX3
GBF1
TMEM160
IMMP1L
ELP4
PGP
BRICD5
PROSER3
HSPB6
SARNP
ORMDL2
CAMTA1
AK2
PWWP2A
UNG
ALKBH2
NFATC2IP
MTMR12
INCENP
NUMB
SLC25A25
NAIF1
NCBP2AS2
NCBP2
UBALD2
ZNF143
ABHD2
BOLA2-SMG1P6
AKR1E2
TICRR
AP3M2
DNAJC14
CENPF
SPTLC2
ATP5PD
CNOT1
ATG9B
ABCB8
YIF1A
TMEM151A
PRPF40A
ARL6IP6
LRRC45
CENPX
FRYL
PAN2
IL23A
KHDC4
GOLPH3L
HBP1
CCDC146
CNOT3
DCUN1D4
ZWINT
H2AX
MANF
COPZ1
ZSWIM4
MAEA
BCAS3
NUP107
ZBTB5
SRP9
LRCH4
FBXO24
FDPS
DCTN4
ENSA
MSMO1
NDUFB3
FAM126B
PCP2
XAB2
ZFYVE26
RAD51B
FRG2C
ANP32A
ZNF688
RBM42
TMEM217
TBC1D22B
CYB5B
TYK2
SIN3A
NDUFA2
IK
GOLGB1
KDM4B
YJU2
PHB
CDC23
ALKBH3
HGS
ARL16
ETF1
CGGBP1
ZNF654
CBX5
HNRNPA1
PAIP2B
PRRC2B
INTS4
SIRT2
NFKBIB
MTFR2
TMPO
MTR
MSTO1
ISY1-RAB43
ISY1
SPRING1
RNFT2
PNPO
PPP1R3F
FOXP3
IARS1
MAP3K3
WDR25
WARS1
RPLP0
BUB3
FAM126A
UBE2T
WBP1L
WDR89
POGLUT2
BIVM
BRIP1
FARSA
CALR
SSR3
ZSWIM1
ZMAT2
NFE2L1
SLC25A42
MCM3
RBM48
PEX1
TROAP
FAM161B
COQ6
MORN4
PPP2R5A
ECT2
PCGF2
PSMB3
ZBTB3
IGSF9B
CENPA
THAP1
CYCS
MLH1
EPM2AIP1
LMAN2
NRL
DCAF11
PLEKHA8
FKBP14
F11R
CHCHD2
ZNF718
ZNF595
CEP131
GPR137
RAP2A
ACAP2
ZNF519
NUF2
IBTK
WBP1
INO80B
UBP1
H2BC12
H2AC12
GATAD2A
H3C10
H2BC13
H2AC13
GLCCI1
SLC33A1
DDOST
PER1
RPS20
ABL1
LENG1
DDX49
COPE
LARS1
PANK2
WIPI1
TCF19
CCHCR1
CDKN3
USP16
ZDHHC16
EXOSC1
KDM4D
CWC15
HMGCR
KLHDC10
UVRAG
SCNM1
LYSMD1
FRMD5
BABAM1
TNRC6B
NDUFAF2
ERCC8
HMGCS1
DNAJB5
RAB4B
MIA
ZNF555
CNPY3
MYH10
KANSL1
TIMM17A
EXOC4
SRPRA
H3C15
H3C14
H2AC19
H2AC18
NUDT2
KIF24
WDR74
RNF41
NABP2
ZNF691
FDFT1
PDXP
TMA7
CCDC51
POC5
NME7
BLZF1
VPS26B
NCAPD3
LINC02210-CRHR1
OPA1
RPL27
VCP
CKS2
ZNF785
ALKBH6
LOC101927572
PCNX3
MAP3K11
CHD6
BOD1L1
EIF5
DICER1
PCYOX1L
PDCL
RAB11B
STARD4
SPC25
FBH1
ANKRD16
TXNIP
ISOC2
INTS3
DCAKD
NMT1
TTLL5
ERG28
KRR1
FRA10AC1
DHX8
HYLS1
LTN1
GSK3B
PARPBP
NUP37
ZFAND2A
ZBTB9
STIL
TSACC
CCT3
WDCP
FKBP1B
PRMT1
MRPL34
DDA1
LCMT1
SPRYD3
HNRNPAB
RARS2
ORC3
HAGH
FAHD1
CDCA8
C1orf109
DLGAP5
TOM1
KMT5C
STAT2
APOF
BRAP
ACAD10
RTRAF
NGDN
ENPP5
FAM72B
KIF20A
BRD8
UNK
H3-3B
ASF1B
LAPTM4A
SETD3
CCNK
TLE3
CYLD
EDEM3
PICK1
FAM156A
TRAFD1
FAM156B
USF3
TOGARAM1
KLHL28
RBM8A
RAB3A
SAP30L
GATAD2B
DUX4
TPD52L2
ABHD16B
AP2A1
TSKS
KCNAB2
MNS1
GFM1
RUVBL1
LETMD1
CDK5RAP3
NUCKS1
ZNF57
SLC2A8
WDR45
PSMA5
EIF1AD
BANF1
TMED10
SLC25A28
SNRPA
C19orf54
CCDC77
RUBCN
DGLUCY
RPS6KA5
ARHGAP19
PDIA4
RMI2
TXNL4B
DHX38
XPO1
ETV5
RGMB
STX18
DDX39A
PIP4P1
TPCN1
HIBADH
GMNN
IQCD
UMAD1
NEMP1
ZNF626
KLF6
ANP32E
TTC14
TIMM10
ALG8
PPOX
ATP6V0B
DPH2
CKAP5
VBP1
STK40
UBE2J2
RRBP1
TMEM248
RBM14-RBM4
RBM14
UTP23
H4C12
PPM1B
MCCC1
TTC16
PTRH1
JPT2
PAF1
MED29
ZNF564
CREBRF
FBXO5
SF3B5
MRPL24
LAS1L
TMEM97
RWDD1
PMS2
AIMP2
RPS21
RPL18A
SDF2L1
YBX1
EIF4A1
PHF12
RRN3
ZBTB32
TCTN3
TIMMDC1
RPN2
MROH8
PSMA3
FAM204A
TPX2
KLHL20
BAZ1B
TTBK2
ASPM
MDM1
GGCT
DDT
DDTL
BAHCC1
GET3
THYN1
ACAD8
ZMYM5
H2BC7
H4C5
RTN4IP1
QRSL1
WDR81
HSD17B12
ZNF8
TXNDC16
CKAP2L
NAT16
MCM10
ZNF695
TIMM23
CALR3
C19orf44
NEK2
OTUD6B
C8G
LCN12
ZCCHC17
SNRNP40
NOL6
RBM15
ARL17B
ARL17A
PLPBP
ESR2
SLC25A19
STX16
SAMM50
YIPF4
SSBP1
MRPS30
MAP3K13
ZNF141
ZNF727
MVK
GHITM
TPRKB
TMEM45A
NCOA2
WDR53
FBXO45
PABPN1
CFAP43
PEX12
CIART
ATP7B
ALG11
TMCO1
POP5
DCP2
NDUFS8
RAD54L
ZBTB6
PNN
TRAPPC6B
MZT1
BORA
PC
CCDC66
MFAP3
FAM114A2
ZNF574
PPP2R5E
SAP30BP
RECQL5
EFCAB6
ALG10B
BPGM
ERI3
GRK6
PMF1-BGLAP
PMF1
PRADC1
CCT7
DCLRE1C
BUB1
DNAJC25-GNG10
DNAJC25
ZNF680
CWF19L1
FAM117A
KBTBD8
ZNF91
ZBTB26
DAZAP2
FAM222B
EIF3F
RND1
RAD54B
ZNF774
ZNF384
SCAI
TWNK
MRPL43
COX14
FRG2
FBXO31
MAP1LC3B
SYS1
FNBP4
PTBP1
VASN
VPS4B
WBP2
LMCD1
OXSR1
PRCC
RRP9
PARP3
KIF1B
OTUD5
ZC3H10
RPL41
PGBD4
EMC7
OSBPL9
MON1B
FAM83D
EIF3M
RPL37
EHBP1
WHAMM
FSD2
KDM4A
H2BC21
H2AC21
H2AC20
BLM
SLC46A3
RBM39
CDC6
SAMD10
PRPF6
ANKZF1
WDR46
PFDN6
H2AW
PODNL1
DCAF15
GABPA
ATP5PF
H2BU1
NUDT16
ANXA6
DDX41
TNFAIP1
IFT20
CTNNBL1
NF2
CD2BP2
OTUB2
SENP2
RLN2
CAND1
CLNS1A
ATF7-NPFF
ATF7
SZT2
MED8
DNAJC19
IVD
TIPRL
EIF2B2
SELENOK
ZNF830
CCT6B
ARHGAP1
ZNF408
SLC25A32
DCAF13
GINS2
GINS1
ANAPC15
GTPBP4
FER
CIT
CCDC200
PA2G4
SIVA1
TYW1
SBDS
TTC33
AAR2
ORC2
SF3B4
CCDC61
C5orf51
BTD
PTMA
HACL1
SLIRP
ALKBH1
ELK1
UGP2
ZNF775
H4C3
H1-6
NHP2
PSMA6
MYH14
FRS2
PNKP
MBD1
SNRPE
ZNF302
VTA1
NMBR
C22orf39
XRCC4
TMEM167A
RLN1
RNF34
SMG5
KIF18B
TMEM79
RPS26
DNAJC24
DCDC1
ZNF138
CBWD5
CBWD3
TFB2M
CNST
STARD3NL
CEP164
GSTO2
NUDT5
CDC123
CANX
TTC31
COQ7
CCDC142
RNF181
HEXIM2
SCOC
FUT8
KCTD16
YIPF5
TMBIM6
ARL6IP1
FAR1
LOC100421372
HSPA14
CDNF
PUM3
RAB3C
RPS7
SETD5
PARL
ZNRD2
FAM89B
ETFDH
C4orf46
MTOR
PSMC3IP
PPIP5K2
H2BC15
H2AC15
PSPH
CCT6A
SLC25A36
SNRNP200
ARAF
MED30
LIN52
ALDH6A1
SF3A3
SFXN5
UQCC1
SRSF2
MFSD11
C6orf89
TESK2
BMS1
TMEM256
NLGN2
PI4K2A
MAT2B
ADAMTS15
MRPS28
CDC25C
SLC39A9
ERH
PFDN5
MYG1
CSTF1
AURKA
DDX50
HJURP
OSCP1
ZNF85
TTK
COG3
TMEM183A
CCNB2
COX16
CCDC174
SCAND1
NUP214
RPS14
TUT1
ALG10
TRMT10C
H4C11
IDI1
CDK13
TM2D2
ADAM9
DARS2
CENPL
MRPS23
TAMM41
ZSCAN30
GTF3C5
OPA3
CNNM2
GORAB
RABL3
GTF2E1
METTL25
CCDC59
NUMA1
LRTOMT
KNOP1
TRAPPC6A
BLOC1S3
SEC23B
ING1
ZNF107
PPP6R3
CENPM
STAT3
DCBLD2
WBP11
C12orf60
TOMM70
LNP1
SDHAF2
CPSF7
PEX2
GZF1
EMSY
BBS10
RPL13A
PCF11
CROT
ZNF273
UTP25
PSMD3
SNRPD2
QPCTL
C10orf143
NUP42
VPS35
CCDC90B
DEPDC1
TARS1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
GOLGA5
TTC8