ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671313 | SUM 159PT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◣ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
KNL1
MTRNR2L1
DUX4
SHF
PPP6R3
PRMT5
B4GAT1
BRMS1
SACM1L
HMGN4
MTRNR2L2
MSH3
DHFR
NDUFS7
POLR3E
TRIM7
SNX16
BORCS6
PCGF2
PSMB3
H4C8
FBXO31
DPP9
POLG
ILF2
CCDC107
LTA4H
FRG2C
LUC7L2
FMC1-LUC7L2
FMC1
MCRIP2
METTL26
GSTA4
C8orf37
PSMA3
RAB11A
ELF1
WBP4
RNASE4
ANG
TRIM41
CNN2
TMEM259
SMARCC2
HSPA6
STAT6
RPS29
BCAR3
PLXDC1
MTRNR2L8
TTI2
ZBED9
TBL1X
PXK
CASC3
PPEF1
RS1
POLDIP3
FRG2
MED16
DHRS3
DDIT4
TPCN1
NCOA7
COL23A1
CSRNP1
MACC1
ZNF827
MUC3A
FAM227B
DTWD1
BZW2
ANKMY2
GTF2H2
MYNN
ACTRT3
OSGIN1
RBFOX2
STX16
TIA1
TMEM107
SELENOH
INTS12
GSTCD
ZSCAN22
SERPINE1
PRKCE
HES7
ALOXE3
GBA
OR1F1
MYC
ZNF839
HMGB1
USPL1
KLRC3
YARS1
S100PBP
FIGNL1
FRA10AC1
SIRT4
SYS1
SNAI2
NME1
WNT9A
PLD1
PHLDB2
TMEM248
ATXN2L
IARS1
H4C14
H4C15
MAP3K20
EPB41
ANP32E
MAT2A
IER3
FLOT1
H4C12
STX18
PSCA
FZD2
NFE2L2
MRPS31
ARHGDIA
PTPN21
URGCP
EPN1
UBE2D4
CDKN1C
RBBP5
MRPL40
HIRA
TRIAP1
SETD7
LASP1
MNAT1
RPL37
NFIL3
F2RL3
GADD45A
EIF4A3
ZBTB45
GTF2H2C_2
GTF2H2C
DNAJC19
JUNB
SLC44A1
AAR2
RPGR
CCN5
GABARAPL1
C17orf75
CCL20
GTF3C3
P3H1
ABT1
KRT6A
IRX2
C5orf38
NUF2
SLC19A2
USP17L20
USP17L22
KLF7
UCHL5
RO60
PUS1
CARD16
FRMD3
OR2T1
CCND3
TAF8
MRPL53
TRIB1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LRRC59
FAN1
ARIH1
KLF9
ISLR2
METTL15
KIF18A
TAMM41
PSMF1
H1-2
INO80C
CPEB3
LEMD2
KRBA2
CCNL1
RANBP2
BTN3A2
CCDC200
H4C5
ARID1A
MCIDAS
DTNA
HES1
MIDEAS
NDUFS3
KBTBD4
WDR36
RPS7
EIF4G2
ROS1
MKRN3
WDR24
CCAR2
C8orf58
EGFR
TACO1
FUS
ZC3H10
RPL41
VEGFA
SOD2
ATF3
SAR1B
MRPL17
TIMM44
TOB2
HIF3A
MRPL21
IGHMBP2
FEM1C
WDR31
DEF6
FAM107B
TBC1D16
H2AX
TBC1D19
H3C8
H2BC10
COMMD1
VWA7
TPM2
GPC1
PPL
STAT3
HAL
FAM43A
ATP1B3
OPA1
CFLAR
ABCG1
OR14K1
LTBR
SCNN1A
ARHGEF12
MYBPC3
ZNF142
BCS1L
FEM1B
NLRX1
H3C2
H4C2
STAU1
DDX27
SYCE2
SLCO2A1
SRSF2
MFSD11
SEC13
JUN
RPA3
IRF2BP2
FKBP5
SRSF6
MRPL44
PTPRM
BDKRB1
RICTOR
LRRC37A3
COX16
LY6K
RNF207
WTAP
NOP53
LPIN3
SOAT2
IGFBP6
HPD
PSMD9
EIF1AD
BANF1
POLR2C
ARMC12
SLTM
TRAF7
HNRNPD
CITED2
ACSL1
EPRS1
SLFN5
PLIN3
INTS6
AQR
ID2
DRAP1
C11orf68
SSNA1
ANAPC2
NUP50
ADNP
MAP2K2
BTG1
GLIPR1L1
CAPS2
TP53I3
TES
THUMPD1
TMEM242
KDM6B
DST
BEND6
BCL3
PARL
SOD1
NDUFS4
NUP107
TSHZ2
CDK6
SRRM3
FTH1
H4C4
PDE4D
MAML3
PBLD
HNRNPH3
POFUT2
YBEY
MCM3AP
RPL22L1
MTREX
DHX29
FUCA1
SCNN1G
TSPAN4
POLR2L
FANCI
ITGB3BP
EFCAB7
PRR5L
TNPO1
MAP4
IL1R1
SUMF2
NECAP2
CTNNA3
BNIP3
MTF2
SLC24A1
MPHOSPH10
MCEE
CALM2
TRIP4
CAMK2D
PAFAH2
SLC27A4
ADK
DCP1A
PHACTR4
IMPDH2
SSRP1
P2RX3
PHC2
SF3A3
CDPF1
ZNHIT6
LIMS4
SLC35A3
PEX3
ADAT2
RAD54L2
CTNNB1
MRPL39
ZNF460
NMT2
PLCD3
ACBD4
SERPINB2
CCDC88B
LIMS1
SEC31A
DUS2
DDX28
TTC4
KDM2A
TAF10
HES4
ART4
NPIPB9
TLCD5
CLUAP1
C16orf90
POLR3B
FAM160B1
TRAM1
COPS8
OSBPL8
SIAH1
RCC2
B2M
CAMKK2
RTN4
HSP90AB1
SELENOW
ZSCAN9
NUP54
KAZALD1
BCAR1
GYPC
PER1
GARS1
HYAL1
GOSR1
NAA80
HYAL3
SPSB1
S100A2
H4C11
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
NDUFB10
RPS2
UBTD1
MMS19
GPN3
FAM216A
NUDT9
IL4I1
HPS5
GTF2H1
NUP62
ATF5
HES3
ACYP1
ZC2HC1C
CEP120
NQO2
ASH1L
R3HDM2
INHBC
TMEM167B
NLE1
PPM1A
IGF2BP2
NR1H3
STMN3
RTEL1
USP30
SNAPC5
GZF1
DSTYK
YPEL2
NDUFA12
ACP2
C19orf53
HOXA3
ERCC1
SLC33A1
SLC39A13
SURF6
PPP1R1B
AHCY
TRIB3
CCNC
FBXO4
TRIP11
TMEM238
RPL28
TOMM5
AARSD1
TGIF1
MED23
TRMO
FBXL5
ASNS
FAM126A
HEXIM1
NSUN4
H2BC5
H1-4
RAD50
MTERF4
TMX4
LSM12
G6PC3
CFAP410
GPAT3
MUC5AC
LSG1
SRSF4
ARID5B
ZC3H6
MRPL12
PFKFB3
GTF2A1
PHF23
DVL2
PDPK1
USP38
KANSL3
FER1L5
FOXJ3
DR1
CETN3
KRT8
H4C3
H1-6
SLC38A2
TM2D1
KLHL20
TSPAN16
SPRED2
R3HCC1
TATDN3
NSL1
USP48
SIK2
ABHD10
TMC1
CCND1
EIF3B
TARS2
VPS33A
WDR11
GPAM
FTL
DPY19L4
TBC1D9
MGST1
PDE4A
MTERF1
TEX46
KDM1A
NMNAT1
LZIC
PAXBP1
MRPL22
GEMIN5
SRSF7
BIRC3
SREK1IP1
CWC27
SLC22A15
INA
EIF2D
MTIF2
TUT1
NUDT16
AXL
STK17B
DCAF10
ZFP36L1
ARL14EP
ZNF696
IL1RAP
TM4SF1
SRSF1
DNAJC9
FUT8
ZMPSTE24
DGUOK
PPA2
CHPT1
RNF121
LOC100133315
SMS
SMAD3
TAF12
TFAM
DBNL
ANK2
HTR5A
NABP1
RPS15
NFKBIZ
SLC38A1
PCCB
ZNF385B
DNAJC24
DCDC1
POLR2J3
C12orf65
ZSCAN30
ABHD14B
ABHD14A-ACY1
ABHD14A
KLRK1
LPIN1
ZCWPW1
MEPCE
METTL25
CCDC59
RAG1
EXOSC6
TMSB10
TRAF6
NAT10
ZXDC
SAMSN1
ZNFX1
SSBP2
SNRPD1
RPL12
LRSAM1
SLC7A11
SMG7
DDX1
ELF2
RBM28
NDUFC2-KCTD14
NDUFC2
SCFD1
CXCL8
SNX18
MBP
IFTAP
SCYL3
RAG2
GIPC3
MT2A
COMMD2
MAP3K8
MCAT
SLC16A7
SVIL
POU2F3
NFKB1
FGD4
SLC39A1
CREB3L4
CAAP1
C2orf42
U2SURP
B3GALT4
RPS18
HEXB
LETMD1
TBC1D4
APTX
DNAJA1
EIF4EBP1
GPATCH1
HUS1
G3BP1
PRDM1
NREP
SMIM3
VRK2
SLC1A5
LRRC57
HAUS2
MRPS2
C9orf116
HIP1R
CPNE8
SLC25A51
PARP2
SPOP
STK40
METAP2
C6orf62
MAP1LC3B2
EDC4
RAB18
SH2B1
ARID2
STRA6
ZNF292
CEMP1
CIAO3
TMEM39A
NGLY1
OXSM
SOS1
RPL32
FAT4
KMT2E
LTF
PDE11A
MRPS35
RBM45
SLC35E2A
SNX17
EIF2B4
ZMYND8
DYM
ALG10
C17orf78
TMEM235
FNTA
ETFDH
C4orf46
SOST
MTMR2
PNP
SMARCD3
ZNF414
MOB4
PUM2
BRIX1
RAP2B
C18orf21
ETS1
TM4SF19
CDK5RAP1
NOL7
RFFL
TARDBP
FAM184A
MRRF
BLOC1S6
COX7A2
TSSC4
EIF4H
GATD3B
GATD3A
INTS4
TTC26
PRPF39
HDAC7
CCDC174
MEIS1
NUP153
SPAAR
PMPCA
ENTR1
TOR1AIP2
TOR1AIP1
HRCT1
NDUFS5
POR
FAM162A
CCDC58
GPBP1
MRPL3
C1QTNF1
EMP1
TMEM184A
ZNF221
CHD1L
BCL9L
TEFM
PRKAB2
PTK6
MRPL58
ACTN1
UFL1
MTLN
XYLB
CDKN1A
ANXA9
CERS2
C12orf43
TBX3
PLEC
TIPARP
RSPH3
PLK2
SDAD1
ADGRF5
FCMR
PSMD3
MAPRE2
FAF1
LSMEM1
RNF43
MCOLN1
ERI1
RPL5
INF2
ARMCX5-GPRASP2
ARMCX5
FKBP11
DAGLB
MRPL35
IMMT
HARS2
HARS1
GEMIN8
ELOVL3
MEMO1
TIMM17A
LSP1
NOB1
MRPL48
CLCF1
VPS36
CALM1
CKAP2
CARD19
WDFY1
RPS4X
VIM
SLC9A1
MSL2
STOML2
SLC39A8
SLC3A2
GDF15
PLAAT2
CD320
P2RX7
ANXA2
BCAT1
PPP1R15A
SAV1
BIN3
RNF150
DUSP1
TCHP
GFM1
MARCHF4
SPATA4
NTMT1
RINT1
SEL1L
LAMTOR5
IQCH
AAGAB
TOLLIP
HMGCR
RPL22
RPL13
VPS25
AHCYL1
PSG4
ATXN1
ITGB1
SUGCT
MPLKIP
CLK1
C3
RPLP1
MRPS16
KDM4A
TMA16
ABCC3
EGFLAM
SDHAF3
NPIPB8
DDX46
KLRC2
TAF5
PPP4R2
RXRA
RETSAT
ELMOD3
PIWIL2
KCTD5
MTHFD2
TIAL1
NUMB
ZNF23
YARS2
PPWD1
CENPK
XPO1
CHIC2
TTPAL
PACSIN2
NNMT
PEX6
PCBP2
SPATA25
CTSA
NEURL2
SSH1
C7orf65
DYNC2I1
CCDC125
TMEM101
MRPL20
METTL9
PCBP3
NIM1K
SGCA
CD36
MINDY2
MTCH2
DDX18
HEY1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
UPF2
SKP1
ZNF576
IRGQ
NDUFA4
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
GOLGA5
TTC8
DPH6
IQCG
SUPV3L1
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
CCT4