ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671312 | SUM 159PT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

WDR74
MTRNR2L1
KNL1
B4GAT1
BRMS1
DUX4
PPP6R3
SACM1L
SHF
BCAR3
DPP9
PRMT5
LUC7L2
FMC1-LUC7L2
FMC1
H4C8
GSTA4
TRIM7
TTI2
BORCS6
FBXO31
C8orf37
CCDC107
NDUFS7
FRG2C
RPS29
POLG
SNX16
POLR3E
COL23A1
HMGN4
RNASE4
ANG
ELF1
WBP4
PSMA3
TIA1
ILF2
TRIM41
MCRIP2
METTL26
LTA4H
DDIT4
PCGF2
PSMB3
NCOA7
CASC3
RAB11A
OR1F1
ZSCAN22
TMEM107
CNN2
TMEM259
POLDIP3
FRG2
SMARCC2
PLXDC1
TPCN1
ZBED9
IER3
FLOT1
MTRNR2L2
MSH3
DHFR
TBL1X
HSPA6
PXK
HES7
ALOXE3
OSGIN1
PPEF1
RS1
MAT2A
STAT6
MED16
ZNF839
ANP32E
SAR1B
LASP1
TRIP4
MTERF4
ZNF827
YARS1
S100PBP
SIRT4
STX16
RPL37
MYC
CSRNP1
OPA1
WDR36
METTL15
KIF18A
BZW2
ANKMY2
MYNN
ACTRT3
MTF2
ZC3H10
RPL41
ACSL1
NOP53
DHRS3
H4C12
MUC3A
NFE2L2
HIF3A
GOT2
SLC44A1
SELENOH
FRA10AC1
SLC25A45
FRMD8
PARP2
TRDMT1
H4C14
BCL3
RAD54L2
ZMPSTE24
EIF4G2
MNAT1
DCP1A
H4C15
SREK1IP1
CWC27
HSPE1-MOB4
HSPE1
HSPD1
NME1
FAM227B
DTWD1
FBXO4
CCL20
NDUFC2-KCTD14
NDUFC2
GBA
DNAH14
MKRN3
JUNB
NUF2
H4C4
GTF2H2
TMEM242
SF3A3
PTPN6
C12orf57
OR2T1
PHC2
TRIAP1
ABT1
PLEKHG2
MRPL40
HIRA
NDUFA12
SERPINE1
ZNFX1
C11orf49
LRRC59
ATF3
SLC38A2
MRPL21
IGHMBP2
FUS
PSCA
LY6K
R3HDM2
INHBC
C19orf53
IRX2
C5orf38
SOAT2
IGFBP6
NDUFS3
KBTBD4
TMEM248
MTHFD2L
ZSCAN9
MTRNR2L8
TPK1
H3C13
H2BC18
TEX46
KDM1A
ARID5B
MRPS17
NSUN4
SNX17
EIF2B4
PTPRM
GTF2H2C_2
GTF2H2C
KLF9
NUP54
EPB41
H3C2
H4C2
RBFOX2
CALM2
H4C3
H1-6
OR14K1
ZFP36L1
INTS12
GSTCD
H1-3
CYP20A1
HSP90AB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KLRC3
WDR24
ELOVL3
MED23
UTP3
TOP3B
NDUFB10
RPS2
ARID2
GYPC
PHLDB2
BBS1
PLK2
ART4
ROS1
TRIB1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TACO1
EGFLAM
GTF2A1
NACA
PTPN21
MLEC
SRSF2
MFSD11
PLIN3
HPD
HMGB1
USPL1
PSMD9
MYBPC3
TMEM238
RPL28
SLC9A1
NXF1
CEBPB
CDKN1C
GADD45A
SLC33A1
KLRC2
NDUFS4
WDR31
C17orf75
RAB30
UBE2D3
SNAI2
HES4
PSMF1
NABP1
PLD1
DRAP1
C11orf68
KLF7
GTF3C3
CXCL8
PDE4D
MACC1
LPIN3
MRPL35
IMMT
DR1
PSMD3
SLC27A4
H2BC5
H1-4
DUSP1
RPL10A
NET1
SCNN1G
HTR5A
DUSP10
JUN
MCTP1
SEC11A
FIBP
CCDC85B
TBC1D19
CHD1
PCBP3
CCDC9B
RPS7
H4C5
ZSCAN30
H4C11
TATDN3
NSL1
RBBP5
CLCN3
SPRED2
SRSF7
BIRC3
MTERF1
PPA2
TARS2
STK17A
TRIB3
EIF3M
USP17L20
USP17L22
EIF4A3
ZBTB40
CCNC
LIG3
FAM107B
TUBGCP3
MRPS31
GMEB2
PCMT1
ZNF460
SAV1
HCAR2
PSMD12
STK40
CDKN2AIPNL
PCMTD1
UNG
ALKBH2
POLE4
PSMC2
DNAJC2
TBRG4
FOXJ3
CCAR2
C8orf58
H3C15
H3C14
H2AC19
H2AC18
SNAP47
JMJD4
CCDC200
RTN4
LTBR
SCNN1A
LIMS1
SMIM3
MRPS18C
HELQ
KRT6A
PHKA1
LOC100509620
DCAF10
POLR1H
SEC31A
MGST1
TMEM158
CCNL1
TOB2
CDC42
PRRT3
RXRA
NEDD4L
SUMF2
LARS2
IQCG
SOD2
WTAP
ZNF770
TAMM41
LMLN
CCN5
MAP4
SNAPC5
EIF3B
SAMSN1
NDUFAF5
ESF1
ARHGDIA
NTSR2
C1QTNF1
POLR2J3
NSFL1C
GABARAPL1
PHACTR4
BLOC1S6
KANSL3
FER1L5
S100A2
MRPL39
POLR3B
DCAF8
DEF6
KRBA2
HIP1R
INSYN2B
FAM72C
FAM72A
TRAP1
PCID2
CUL4A
BTG1
SNX14
ASB2
EEF1A1
HNRNPAB
NFAM1
SNX8
H1-2
H3C10
TRIOBP
H2BC13
H2AC13
H2BC14
H2AC14
ITPRIP
DMAP1
THOC3
AGK
HOXA3
ERCC1
H3-3B
NUP107
SLC30A5
RPS6
LRRK1
AQR
POMK
PSG1
PIKFYVE
MEIS1
DPY19L4
COPS7B
GTF3C5
C8orf33
ZKSCAN4
COMMD6
UCHL3
SETD7
ASH1L
F12
EPRS1
PFN3
SUGCT
MPLKIP
ISL2
MICALCL
COMMD2
DNAJC11
GNAI2
RANBP2
CCT2
ZBTB20
ZBTB45
TEFM
SSNA1
ANAPC2
SPRYD4
ATXN2L
MBTPS2
MDH1B
FASTKD2
ARID3B
TGOLN2
ASNS
SLC16A1
PCNP
C12orf66
NMRAL1
HMOX2
WDR97
MAF1
STMN3
RTEL1
FAM43A
WDR70
ERRFI1
MRPL22
GEMIN5
RGPD8
RGPD5
RGPD6
GOSR1
MAPK9
STEAP2
PSG11
NKIRAS1
SLC24A1
GNL2
TBC1D16
RPL15
MRPL1
AARSD1
COQ2
SLC35A3
CLUAP1
C16orf90
ATP5MC2
SGCA
NCF4
CXCL3
PFKM
SENP1
NPIPB9
ADGRG6
IMPACT
NMNAT1
LZIC
LTF
PWP1
MET
PYROXD2
EXD2
ATP1A1
KPNB1
MRPS15
HAGH
FAHD1
POLR2C
TTC4
ZNF843
ZCWPW1
MEPCE
FBXO22
SLC22A15
RAET1E
STMP1
NOCT
DSTYK
LSG1
B3GALT4
SLC16A7
PSG4
TMEM68
TGS1
MUC5AC
CAMK2D
MRPL44
PSMB2
AXL
MAML3
CENPP
SSBP1
THOC1
NOL8
LRP12
NOL7
SOST
NUFIP2
WDR11
MAP4K5
ATL1
H3C8
H2BC10
TNFRSF1B
MPHOSPH10
MCEE
WASHC2A
CPEB2
MIDEAS
CDK6
METTL9
ZBTB38
DOHH
BORCS7
ERCC6L2
SH2B1
TES
EIF2D
NDUFV1
COX16
CELSR1
RUNX1
CALM1
RPL13
SFPQ
TMEM223
TMEM179B
PCCB
ZNF622
ADGRF5
METTL25
CCDC59
MRPL20
INTS5
ANXA2
ARL8B
CTF1
BCL7C
RINT1
H2BC21
H2AC21
H2AC20
TOMM7
ANXA9
CERS2
LAMTOR5
CIAO2B
CES2
MBP
RCAN1
RPL5
EGFR
NR1H3
PMPCB
CAAP1
MRPS35
ACP2
TRIM60
IARS1
EIF2B5
ENKUR
CELSR3
FAM162A
CCDC58
SLC39A13
RFFL
ITPKC
COQ8B
CALCB
C18orf32
RPL17-C18orf32
RPL17
TBL3
TOMM5
PLEC
CCDC88B
CDC25C
SNUPN
CEMP1
FAM53C
PARL
HINT3
RNF14
RRN3
GDF15
SNRPD1
RTTN
AHCTF1
METAP1
ACTN1
DNAJC9
GRPEL1
ELP3
TM4SF19
CTNNB1
HERC3
TBC1D22A
PYURF
PIGY
PRDX1
HNRNPA2B1
CBX3
C5orf51
CTSC
DEPP1
USP8
ZNF205
RHCG
PTP4A2
NANOS3
ADNP
STX10
IER2
PHB2
HNRNPD
KCTD5
MT2A
LRRC37A3
RNF138
YWHAZ
CCDC125
OR4E2
OR4E1
PARK7
SPOP
WNT9A
MRRF
H4C7
H3C7
H2BC9
TAF12
ERI1
KIAA1958
C9orf147
NRF1
TMA16
PCBP2
NANS
S100A6
CCDC80
ROR1
PHF23
DVL2
NDUFA4
BHLHE40
PCDH1
RPS27L
FUT8
BNIP1
FITM2
LTBP3
R3HCC1
RHOT2
POMP
RBM14-RBM4
RBM14
RARS1
CD5
CCDC174
CLCF1
SNF8
DNAJC10
KIZ
F2RL3
SCAF11
NUP214
ATXN2
ARID1A
GPC1
SLC7A11
PKN2
IL1RAP
USP53
SLC38A1
SEPTIN7
MFN1
LMTK2
CARNMT1
ZNF335
RABL2B
RABL2A
RWDD1
PSMD1
MAPKAPK5
TAOK3
SUDS3
NME6
NUP85
CACTIN
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
VDAC2
GOSR2
HSPA9
VTI1B
POLR2E
PSMG2
CEP76
NUP205
MRPS7
GGA3
HADHB
HADHA
RPL21
NCLN
EXOSC5
BCKDHA
TBCK
AIMP1
C19orf48
BLCAP
DCTN1
TSNAX
REXO1
SLC35B1
ATP5MG
STAM
TSN
STAM2
SEC61B
FARSB
LYRM4
FARS2
SRD5A1
NSUN2
PES1
PNO1
PAK1IP1
C6orf52
UPF2
SKP1
ZNF576
IRGQ
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
BABAM2
ZRANB2
RBKS
GOLGA5
TTC8
DPH6
SUPV3L1
VARS1
PI4KB
TMED1
RPL35A
RPS23
ATP6AP1L
RPS12
SMC2
MRPS5
ANAPC7
FAM104A
C17orf80
RABGGTB
SELENOF
HS2ST1
USP1
MRPL11
PDAP1
BUD31
PCBP1
EIF4ENIF1
UFM1
ADK
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
APOM
BAG6
PROSER1
NHLRC3
COMMD1
CCT4
SF3B3
COG4
OSGEP
APEX1
PAF1
MED29
TM9SF1
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
ZGPAT
ARFRP1
LRR1
NEUROG3
PDE6B
HES1
RARB
PIN4
OR6B2
NDUFA10
PTGES2
OAZ3
SUCLG1
UBE2I
PDE12
HES3
ARHGAP11A-SCG5
ARHGAP11A
TAF9
RAD17
AK6
STK36
RNF25
MRTO4
EMC1
SKIL
HOXA4
CDX2
VEZT
FGD6
FZD8
CYP26A1
SPATC1L
SEC11C
MAMDC2
RPL7
RDH10
EIF2S3
GADD45GIP1
BICRA
SYBU
CDC73
NFE2
PMAIP1
RARA
ID2
C16orf91
ARHGAP10
RPN1
GORAB
GTF3C4
DDX31
ZP4
NEUROG1
ATOH1
NEUROD1
CNPY2
SP2
BNIP3
KAT6B
SEC22B
LEFTY2
ZNF383
SPATA25
CTSA
BBS9
IGFBP2
LBX1
TPM1
TRIP10
GPR108
TLE4
MRPL38
DNAJB7
TLE3
PHOX2B
NEURL2
SPCS1
GLT8D1
PDHX
APIP
H2AW
HOXA2
ST18
TBX3
ZNF746
HOXA1
DUSP6
INSM1
CCDC33
LIN28A
METTL24
CDCA7L
PCBD2
TEPSIN
NDUFAF8
FGF19
ADAM18
ANKLE2
DNM2
TPRA1
PCGF1
LBX2
NBAS
FOXP1
RUNX1T1
TBX2
HOXB3
ALKBH5
P4HB
PRUNE2
MINDY2
CS
TMEM70
ELOC
DLL4
ANKRD28
SP5
RPS10-NUDT3
RPS10
AXDND1
PDHB
SMAD3
SYNPO
CLGN
DAPL1
DLX4
LPIN1
HUS1
NPAS4
CAMTA1
ID3
TNFRSF19
ARHGEF28
MRPL34
ZFHX3
KIF21B
DOLPP1
DCTN3
TLE1
STX18
RAB5B
ARRDC4
RXRB
ANK2