ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402530 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◣ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

PPIG
LOC102724265
KCNJ15
ZNF562
YTHDC2
CEP85
ZNF623
ACYP2
LUC7L2
FMC1-LUC7L2
FAAH
TM9SF4
PRIM2
ARHGAP39
MTRNR2L2
CCDC130
NOS3
VAPB
CYP17A1
YPEL3
FEM1C
FAM25E
SNIP1
METTL6
EAF1
MTRNR2L8
IGSF3
FAM234A
STAU1
JAGN1
CEP72
POLE4
PRELID3B
RBM28
ACOX3
TRMT44
SAE1
ZSCAN31
FAM20B
RPS7
AGGF1
HARS2
HARS1
UFSP2
BSDC1
TOP3B
GDPD5
CD47
ARHGAP19
MAPK1
EPS15L1
AUNIP
SAR1A
DNAJC14
ZNF426
ELOVL2
IQSEC1
JMJD1C
REEP3
NDUFS7
PRAME
PFKFB3
ACTL8
KMT2A
BTD
C22orf39
ANKRD54
EIF4E
BRWD1
ZNF114
FABP6
RABGAP1
DPY19L4
MRPL40
HIRA
BAAT
ALDH3B1
CLK4
HOXC5
BLM
CNGB1
REXO4
UBE2L3
DMAP1
ZBTB40
YPEL1
RAD21
RBBP5
TMEM70
RIPK1
DDX19B
TMBIM1
MED23
CCDC9
PALM
DCAF10
CEP164
TCP11L1
TOMM5
PPM1F
N4BP3
RAB11FIP1
CLPB
DQX1
STX16
EPS15
KANSL3
GNL3L
RPL26L1
PRPF3
SUGCT
MPLKIP
TIPARP
TMEM222
CCAR2
BMF
LRP5
CBX1
CCDC120
HLA-E
SSBP1
CBR1
RPL41
ZBTB6
CCDC112
CHAF1A
ZMPSTE24
ATP1A1
PIGW
MYO19
CCNI
RPAP1
ERAS
TMEM41A
PGAM5
ZNF117
NUTF2
CENPT
KRTAP10-5
AURKAIP1
TSACC
CCT3
ATP23
FAM136A
RSL1D1
ASCC2
AOPEP
RPS14
COIL
BMS1
GTF3C5
SLC45A4
DPF2
PAFAH2
SERPINB1
SMARCD2
DNAJB12
CD5
BRPF3
NPAS4
SPRYD4
MFN1
ABHD16A
BCL9L
ADPRS
USP30
ZKSCAN2
SLC35B2
LEO1
TFDP2
NDUFA6
RCOR3
TMEM242
DUS1L
ZBTB45
PEBP1
RANBP17
PKMYT1
PAK4
GEMIN7
GTF2A2
GBA
KMT2D
SUN5
DHX37
MRPL16
TPM1
KNL1
DRG2
AGK
PCK1
NUF2
ALKBH3
FAM98B
INO80C
CELF1
HLCS
TJP3
PTPMT1
PROCA1
SCAND1
METTL26
LRG1
ZNF391
DPP9
EPHB4
ZNF839
ITGB3BP
EFCAB7
COASY
CDK5RAP1
CFLAR
PPP6R3
MICOS10-NBL1
MICOS10
GSTA4
TRMT2A
RANBP1
WDR4
PEX3
ADAT2
SMG8
CTNNB1
ZNF473
WDR70
IFT140
CRAMP1
N4BP2L2
PHF21A
ATXN7L2
ZFP41
SLC29A2
B4GALT7
KDM3B
CDK11A
TMEM65
DHX33
MRPS18A
AARS2
MRTO4
NR2C2AP
CHCHD2
ATG101
CEP41
CEP76
PSMG2
KLHL20
TOR1A
DUSP6
PDE11A
MTF2
PAXBP1
SAMD4B
SF3A3
PUM1
NME1-NME2
NME1
COX16
RPS29
YWHAQ
TTLL12
DCP1A
EIF2D
RPL27
INTS12
GSTCD
RAB37
FMC1
NDUFB3
FAM126B
FRA10AC1
RABGAP1L
MRPL44
GDPGP1
CIB1
DSTYK
HMGB1
TBC1D19
MAPRE2
SELENOH
USPL1
GTF2H2C_2
ZFP30
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
TTC32
STX18
GTF2H2C
POLR2J3
RPL37
FAM227B
DTWD1
DNAJC25-GNG10
DNAJC25
COMMD2
SLC33A1
ZNF561
POLR3B
TOR1AIP1
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
MRPS31
UTP3
PPIP5K2
GIN1
CCDC59
RBBP9
CAT
ALG10B
IPO4
RAD54L2
SLC44A1
FRG1
SLC25A51
GTF3C3
EIF3F
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GTF2H4
LSG1
EPS8
INTS5
BCAR3
NSFL1C
RTTN
AP3S2
STAT3
HTR5A
ITGA4
TEFM
PPP6R1
CAMK1D
KDM3A
RNF187
EIF1AD
BANF1
SNAP47
TACO1
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
COPS7B
MRPL21
IGHMBP2
DRAP1
C11orf68
JMJD4
C3orf14
WDR74
PSMF1
ILF2
ATP5MC2
SNX17
EIF2B4
FAM207A
TTC26
TATDN3
NSL1
TRUB2
COQ4
RILP
NEMF
WDR11
SAR1B
WDR36
FAM133B
FGFBP3
ATR
ZNF571
ZNF540
NBN
TSEN15
AKAP10
MTIF2
GALK2
MOB4
MRPL1
CCDC97
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
MMP7
ZNF226
TUT1
POLR3E
GABPB2
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
HSPE1-MOB4
HSPE1
HSPD1
KDM1A
TTI2
TMEM68
TGS1
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
BNIP1
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
RUVBL1
KIAA1549
SNRPB
NDUFAF1
ZSCAN25
CPPED1
RAB30
SEC13
MRPS23
NCOA7
MNAT1
POLG
NUP54
MAN2C1
C8orf37
TTC4
TPR
ODR4
NR1H3
ACP2
ZCCHC4
RMND1
ARMT1
TMEM101
NDUFS3
KBTBD4
RPS20
MITD1
THAP11
MTBP
MRPL13
CHD1L
PRPF18
GMPS
COX7A2
NOP16
HIGD2A
PSRC1
EPRS1
GRPEL2
SLTM
BRF2
FAM228B
MED18
SNRPD1
ZNF609
DCLRE1B
AP4B1
TSFM
ING2
SDHAF3
NAA20
PARP2
METTL9
SLC35A3
SF3B6
SLC39A13
HNRNPD
ADRM1
DEFB124
PHIP
CASC3
COPS2
HUS1
EIF3E
TPK1
PSMD3
SESN1
CRKL
NCBP3
NECAP2
SMU1
OPA1
CDC73
ZNF292
VIRMA
MRPL3
SNRPB2
RAB18
MLEC
TGFBR2
LRP6
ALG10
EXO5
PLEKHM3
CLUAP1
GORASP2
ZNF280D
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
INO80B
SACM1L
ZNF605
R3HCC1
CCDC88A
RBM45
ZSCAN30
PIP4P2
SEC22B
SNRPE
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
ANKRD40
RPL5
MRPS14
SMG7
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
RPS15
ANXA2
HAX1
GFI1B
LSM5
CLTB
SNRPD3
GUCD1
PDCD6IP
RNF6
SEC23B
PSMD6
DPP8
SUGT1
BANP
DDX1
GABPA
ATP5PF
VPS13B
C18orf21
CEP85L
CASS4
PPP2R5B
ZSCAN22
ZNF76
SMIM13
KRR1
U2SURP
NMNAT1
LZIC
PUS10
PEX13
C10orf88
NBPF1
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
MAPK1IP1L
PRPSAP1
MRPL39
RNF125
NOXA1
ITGAL
NFAT5
RPS3A
CBWD5
DHX16
ZZZ3
SRRM3
RCAN1
NOTCH2NLA
MRPS33
GSPT1
CCDC150
ERCC6L2
TARS3
TBL1X
PTPN4
SLC35B1
WWOX
PRMT5
ZNF165
NUP107
GLIPR1L2
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
FBXO22
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
LRRC37A3
TMED1
SOD2
RALBP1
GNB2
HNRNPA1L2
DGKZ
GPAM
DNAJC11
RABGGTA
STX6
CDK12
CYB561D1
XKR7
HEXIM1
MED4
TSC1
ACBD6
SET
ZNF846
STC1
ATG4C
ZNF770
MTMR6
FAM13A
C11orf49
SLC39A3
ATG5
CREM
EIF2B3
TVP23B
ZER1
RIF1
HEATR1
ZNF3
MRPS15
KAT6A
RPS26
FAIM
MTOR
ATP5MC3
RPL38
INTS4
P3H4
RAB5C
CIZ1
LIPA
CRBN
IQSEC3
LNPEP
ALG14
GARS1
RFX7
QRICH1
RESF1
INKA2
DDX20
ZNF527
PRRG2
NOSIP
COG2
DCT
PPP1R11
EEA1
TMBIM6
FOXJ3
ATAD2
ZMYM5
ABCG1
TMA16
RAP2C
CBWD3
MEX3C
PPIL3
NIF3L1
FAM160B1
INTS2
DISP1
CFAP20
C2CD5
NMRAL1
HMOX2
DDX46
CHMP7
TRMT61B
MMACHC
CCDC163
SREK1IP1
CWC27
NR1H2
SETD1A
RBL1
YBEY
MCM3AP
MAN2A1
PPIH
TSPAN10
NPLOC4
ANO8
HIBADH
TRDMT1
SENP1
PFKM
BAIAP2
ANKRD36
VWA8
RBIS
PET117
KAT14
CCDC107
RWDD1
IPO13
DNAJC24
DCDC1
WTAP
PSMB7
NEK4
TNPO3
CSTF2T
TMEM167B
SH2B1
HNRNPH1
ZNF827
POLDIP3
ARMH3
SECISBP2L
CPLX2
ZNF783
ARL8B
RPL29
SLC30A6
LARS2
CCDC174
C12orf73
NOL12
TRAF6
RAG1
UFD1
CDC45
RGPD1
SMIM12
DDX27
AASDH
ASNS
RAD52
DHX8
MRPL42
ZC3HC1
CUL5
ZNF529
PPP6C
VRK2
WARS2
RHOT2
THG1L
MEGF8
DPYD
ZNF518A
STRADA
NARS1
KCTD5
ABLIM1
HDAC1
ABCA3
TMEM208
LRRC29
RSAD1
ZNF341
ISY1-RAB43
ISY1
THOC5
SELENOT
RETSAT
NOTCH2NLB
WDPCP
MDH1
RUNX2
CLUL1
DDX41
METAP1
MFSD8
ABHD18
GOSR1
TNRC6B
PHB2
UCHL5
RO60
NOL11
PSTPIP1
FBXW7
DCP1B
PSMA1
DHRS13
PTPRCAP
ZSCAN12
LTN1
UIMC1
GOT2
MAD1L1
NDUFC2-KCTD14
NDUFC2
ZNF350
SNX16
PLK3
ZNF286A
PARK7
MKRN2
ADAR
TBC1D22A
TRAM2
RRP15
RBSN
PRMT3
STAT6
ALDH9A1
MIER1
SIRT4
PPP1R8
ZNF212
ANXA2R
FUT10
CLPTM1
C19orf48
ATP5MPL
NDUFAB1
HES3
LRRC59
METTL8
DCAF17
SFSWAP
SLC25A53
YJU2
EIF4A2
RGPD2
SNX19
PES1
BMT2
ZNF331
ZC3H6
SCP2
GCFC2
SEC31A
MIGA1
DAB1
TSC22D4
STXBP3
POLR1F
ZNF398
PPRC1
ZNF461
FKBP5
S100A4
CGGBP1
ASF1A
NOTCH2
CALM1
TMEM30A
ZNF383
LZTR1
SLC39A6
PRRC2B
FIS1
RPL26
TMED2
TNFAIP8L1
EXOC2
NDUFA4
KCNH1
TBC1D13
OSGEPL1
ARL14EP
TYSND1
NUDT15
ZNF335
UBE3B
EIF1B
ZNF585A
SLC38A2
GFM1
CDKN2AIPNL
WDR47
TBL3
STAT1
SPATA13
UBE2D3
ZNF570
GTF2B
HDAC2
FGD3
HECTD1
TMTC2
NFE2L2
FNTB
CCNG2
AP1G1
SPHK2
RPL18
HEMK1
CCNL1
AHCYL1
ZDHHC6
VTI1A
SERBP1
EIF5A2
ZNF302
ZZEF1
SIRT6
CYB5D2
ANKRD24
VPS13D
RPL22
CRLF3
MRPL38
RFXANK
BORCS8
RAB11A
SYPL1
WDR24
ING3
CALM2
PSMD11
MRPL45
ZNF25
SASS6
APEH
KDM5C
EEFSEC
BRIX1
ZNF569
THOC3
NUP214
CLASP2
ZNF510
ADNP
GTPBP10
UBOX5
FASTKD5
TADA1
ZBTB20
GOSR2
ANGEL1
TTC14
HIF1AN
TBPL1
UGCG
PIK3R1
ZW10
YAP1
MGST3
PDCD2
SCYL3
PSMG1
PPA2
LIG4
H4C8
SRFBP1
PIKFYVE
PDE8A
VAMP4
RPS12
OGT
RPA2
EDC4
APRT
ZNF44
SRSF11
MAML1
MRPL58