ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823127 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◣ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RANGAP1
STARD10
PHF13
ZNF286A
TIMM22
IFRD2
TNFAIP1
IFT20
IPO13
PSMC4
TBC1D23
ZNF331
MICOS13
HSD11B1L
ERCC4
AP2S1
MRPL24
GSPT1
RTEL1
ZNF414
SF3B2
MMACHC
CCDC163
SEC11C
SERTAD3
ACIN1
C14orf119
RPS27A
CLHC1
FAM193A
PAFAH2
CXXC1
ZNF565
ZNF146
TMEM245
CLPB
NOLC1
TERF2
STIL
ANO10
PSMD2
ZNF256
CARM1
VPS35L
PHF12
FBXO48
APLF
SLC4A2
CDK5
GTF2H4
EIF1B
ZNF56
MEA1
KLHDC3
SYMPK
DUS3L
FOXA3
PRCC
NT5C3A
MPI
GORASP2
PIK3R2
ZNF268
ZSWIM9
LIG1
OSCAR
NDUFA3
APEH
REXO1
CHMP5
BAG1
ZSCAN22
ZW10
PA2G4
KPTN
ST3GAL2
ZNF180
ATP6V1F
TMEM208
LRRC29
DNAJB12
CEP128
RETSAT
CALCOCO1
C12orf43
STXBP3
DAXX
CNPY2
FZR1
GSK3A
SAMHD1
CRTC2
SRRM2
CFAP20
ZCCHC8
NEURL4
SYNGR4
N4BP2L2
ZNF133
ETFDH
C4orf46
ZNF227
PRRG2
NOSIP
BTRC
TBC1D31
ABLIM2
TSPAN17
EPRS1
PEMT
GATB
AHCY
ACP6
SPNS1
CDC6
SERF2
SMPD3
EIF1AD
BANF1
MPHOSPH10
MCEE
RPGRIP1L
FTO
NSFL1C
PGM2L1
PI4KB
POLR2E
ADCK1
ZNF408
ARHGAP1
FOXP4
DOP1B
C1orf159
PKD1
SCNM1
LYSMD1
NOP16
HIGD2A
HEXIM2
RNASEH1
PANK3
CASP2
DNAJC16
CNIH1
CNEP1R1
LINS1
ASB7
ZNF530
PFKFB4
CNIH4
UBR2
ZNF557
ZDHHC16
EXOSC1
RBBP5
INO80B
TMEM59
PRKCSH
CCDC151
MFN2
SDCCAG8
CEP170
TSSC4
U2SURP
C1orf74
TMEM115
ZNF7
BARD1
TMEM201
CCDC59
SPHK2
RPL18
THOC3
HAUS6
GTF2IRD2B
GAPVD1
ABCF3
ZNF446
DCTN1
E2F4
ITGB3BP
EFCAB7
BANP
TBL3
FNTB
ZNF547
TRAPPC2B
DNAJC28
SMIM12
PPP4R3B
STK25
ZC3H3
ZFP90
PLTP
CYB561D1
ATL3
CACTIN
USP35
KCTD21
SLC35B1
TMEM199
POLDIP2
MAP2K7
NACA
ZNF84
ZNF546
ESCO2
USP34
RPL13A
RBIS
SNAPC3
FAM98A
PELI1
ZMAT5
UQCR10
WDPCP
MDH1
INTS9
HMBOX1
ENDOG
UTP6
KBTBD6
SNAPIN
THOC6
HCFC1R1
SKP2
LMBRD2
RPL37
DMAC2
DGAT1
RIC8A
BET1L
PNKD
MFSD3
AAMP
MZF1
SSBP1
SNX17
EIF2B4
BNIP1
TSC22D4
BIRC6
CDC27
EIF4B
FBXO9
CCAR2
ZNF605
FAM220A
CNOT1
SEC14L1
DNAJA3
RPP40
SYNCRIP
CCDC150
TMED4
TPR
ODR4
PARP2
FAM168A
CTDP1
CLPP
DIXDC1
CLPX
ATR
ZNF25
ICE1
BUB1B
PAK2
INVS
ERP44
CEP162
TOP1
EIF2D
RPL26
FEM1B
KIFAP3
RAB5A
EFHB
TFB2M
CNST
YTHDF1
ZNF444
RNGTT
TIMM17A
KANK2
LYSMD3
RPL27
TOR1AIP1
TMEM68
TGS1
HIF1AN
VCPIP1
C8orf44-SGK3
LARS1
ZNF134
KMT5A
SETMAR
WWOX
LRRC37A3
GTF2B
ARHGAP9
MARS1
POLR3F
DZANK1
NDUFV1
NDE1
MARF1
RAB1B
CYP20A1
ATP6V0D1
ZNF14
SDE2
MBD1
AFG3L2
AURKAIP1
RMND1
ARMT1
MRPL15
CC2D1B
TRIP4
SLC33A1
COG2
MAPK1
TSNAX
RPP14
HTD2
TMEM18
AKR1A1
SNRNP70
RIC8B
EIF1
SLC24A1
INTS14
ZNF383
ZNF576
IRGQ
CTU1
SEH1L
SCAND1
NMNAT1
LZIC
RALBP1
MTRES1
RAB6A
DHX9
C8orf76
RTTN
PRPSAP1
MEMO1
PUM3
CEP350
NAA35
STRN
SIVA1
FDXR
POLR3H
ZMPSTE24
RAB18
TSGA10
C2orf15
DHX8
CNOT4
UBFD1
EARS2
SLC25A11
RNF167
RPS3A
PPRC1
DCAKD
SEC61A2
VKORC1
CCNT2
ACTR1A
NMT1
IQCB1
EAF2
SPG21
CCL5
DCP1A
COPS7A
PLD3
C19orf47
ZNF497
RPL18A
PHB
RAB5C
LONP1
CATSPERD
TPGS1
SAYSD1
ZNF764
LIMK2
MZT1
BORA
PLK3
CCAR1
ZNF416
SLC35E2A
WDR54
C2orf81
ZNF816-ZNF321P
ZNF816
AP2M1
TRUB2
COQ4
AMBRA1
SLC10A7
SPAG4
NHEJ1
SARS2
MRPS12
STK11IP
SLC5A6
ATRAID
RCE1
DHX34
POLD1
FAM228B
SF3B6
NOL11
C19orf48
MRPL34
EYA3
SAC3D1
PARD6B
ZNF586
TIGD2
ATP8B3
ATP5MPL
ZNF189
MRPL50
SOCS5
COX14
RPL22
KLHDC10
FEM1A
ZNF773
KIFC1
PIGO
PTK6
CRELD2
ALG12
DRG2
BMS1
PGRMC2
OSGEP
APEX1
AP1M1
TSNAXIP1
RANBP10
MIGA2
TMEM141
SERBP1
DTWD2
PTPN4
TVP23B
NUDCD1
ZNF140
ASNSD1
ASDURF
SH2D3A
MRPL42
RPA2
LOC100289561
FBXL19
EIF3C
EIF3CL
SLC25A23
TARBP2
PHF23
PUM1
HMGB1
USPL1
ZNF585A
IBA57
AGA
MYBL1
MYBBP1A
UMPS
TRMT1L
SWT1
SUCO
SMIM13
MFSD8
ABHD18
PCM1
PABPC1
RABL2A
PSMC5
FTSJ3
LHPP
STAG3
GPC2
COPS4
CDK11A
BORCS5
NME1-NME2
NME1
ELAC2
ZNF260
EXD1
CHP1
TSTD2
NCBP1
RPL23A
RAB8A
RALGAPA2
CPPED1
MARK2
ASB6
CALR3
C19orf44
CRK
TMEM52
TBC1D13
PSMD11
VPS26C
TSACC
CCT3
C1QTNF6
FAM185A
NPAS1
POLR2J3
RPTOR
HBS1L
WDFY2
PDHX
APIP
SRPRB
SUGP1
MAU2
PAIP2
FARP2
ZFP1
TMEM205
CCDC159
SART1
NDUFS4
MRPS31
MRPL38
DRG1
RANBP3
ADCK5
ZNF324B
ACAA1
SNRPD1
SLC7A6OS
PRMT7
CSNK1A1
TXNL4B
DHX38
EEF1G
TMED10
TMEM242
BTD
HACL1
SHBG
FXR2
MIB1
GBA
ZNF527
DFFB
CEP104
RAD50
ABI1
FDXACB1
C11orf1
FBXL12
XAB2
TMED1
CBR4
CDK5RAP3
ASCC2
PFDN4
RIDA
POP1
SLC39A13
CDKL3
SLC35B4
UBE2B
ELMOD2
FBXO46
ZNF573
RPS11
SENP2
ZSCAN32
ZNF174
TTC9C
HNRNPUL2
CARNMT1
CIAO2A
MAMSTR
PLEKHM3
ZNF461
PEX16
SMG5
DIMT1
GPANK1
CSNK2B
LUC7L2
FMC1-LUC7L2
FMC1
CCNI
PDCD2
LMBRD1
DNM1L
RDH11
MIA3
OS9
CCNB1
NIFK
CBWD5
KDM8
RRP9
PARP3
TIGD4
ARFIP1
SMPD1
BCL10
ZNF350
SKIV2L
NELFE
RPS16
FAM177A1
SLC16A13
TELO2
CEP131
CCT2
ZCWPW1
MEPCE
TBC1D30
GNS
SF3B5
CIPC
TRAPPC3
YIF1B
RPS7
B9D1
MAPK7
FAM71E1
EMC10
AHCTF1
GTF2H5
TMUB2
RWDD1
LZTR1
VHL
SHISA5
LMF1
ZNFX1
KCNJ15
YPEL3
BSDC1
MTRNR2L2
MTRNR2L8
DUSP6
ZNF562
PDE11A
RABGAP1
FEM1C
CBX1
NUF2
MTF2
PAXBP1
DMAP1
SAMD4B
SF3A3
STX16
ARHGAP39
FAAH
NDUFS7
MED23
BAAT
CEP85
COX16
RPS29
CCDC130
PEX3
ADAT2
YWHAQ
ZNF117
TMEM41A
ZNF623
TTLL12
ACYP2
INTS12
GSTCD
RAB37
CEP72
PPIG
JMJD1C
NDUFB3
FAM126B
FRA10AC1
RABGAP1L
MRPL44
GDPGP1
CIB1
POLE4
DCAF10
NOS3
DSTYK
NPAS4
KMT2A
TBC1D19
MAPRE2
ACOX3
SELENOH
GTF2H2C_2
ZFP30
ZNF426
GTF2H2
TTC32
TRMT44
STX18
GTF2H2C
TMEM70
TOP3B
DPY19L4
FAM227B
DTWD1
DNAJC25-GNG10
DNAJC25
PRELID3B
COMMD2
ATP1A1
ZNF561
POLR3B
TFPT
PRPF31
RERE
GSTA4
YTHDC2
UTP3
PPIP5K2
GIN1
RBBP9
CLK4
CAT
ALG10B
IPO4
RAD54L2
SLC44A1
FRG1
SLC25A51
SMARCD2
GTF3C3
REEP3
RPS14
EIF3F
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
ANKRD54
LSG1
EPS8
INTS5
BCAR3
MRPL40
HIRA
AP3S2
SMG8
STAT3
REXO4
CDK5RAP1
HTR5A
ITGA4
TEFM
SNIP1
PPP6R1
CAMK1D
KDM3A
INO80C
RNF187
SNAP47
TACO1
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
COPS7B
MRPL21
IGHMBP2
DRAP1
C11orf68
JMJD4
C3orf14
WDR74
PSMF1
KANSL3
ILF2
ATP5MC2
USP30
FAM207A
TTC26
TATDN3
NSL1
TMEM222
RILP
NEMF
WDR11
SAR1B
WDR36
SLC29A2
DUS1L
ZBTB45
FAM133B
FGFBP3
ZNF571
ZNF540
NBN
ZNF391
TSEN15
AKAP10
MTIF2
GALK2
MOB4
MRPL1
CCDC97
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
POLR3E
DPP9
GABPB2
NOTCH2NLC
HSPE1-MOB4
HSPE1
HSPD1
KDM1A
TTI2
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
SNRPB
NDUFAF1
ZSCAN25
RAB30
SEC13
STAU1
MRPS23
NCOA7
MNAT1
POLG
NUP54
MAN2C1
C8orf37
TTC4
NR1H3
ACP2
ZCCHC4
TMEM101
GTF3C5
NDUFS3
KBTBD4
RPS20
ADPRS
MITD1
THAP11
MTBP
MRPL13
CHD1L
B4GALT7
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
PSRC1
GRPEL2
TPM1
SLTM
BRF2
MED18
ZNF609
TIPARP
DCLRE1B
AP4B1
TSFM
ING2
SDHAF3
NAA20
METTL9
ALKBH3
SLC35A3
LOC102724265
SERPINB1
PIGW
MYO19
HNRNPD
ADRM1
DEFB124
PHIP
CASC3
ZSCAN31
COPS2
HUS1
EIF3E
TPK1
PSMD3
SESN1
CRKL
NCBP3
NECAP2
SMU1
OPA1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
MRPL3
SNRPB2
MLEC
TGFBR2
LRP6
ALG10
EXO5
RPL26L1
CLUAP1
FAM98B
ZNF280D
AGK
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
SACM1L
R3HCC1
CCDC88A
RBM45
ZSCAN30
PIP4P2
SEC22B
AARS2
SNRPE
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
ANKRD40
RPL5
MRPS14
SMG7
TRMT5
SLC38A6
CLTC
STOML2
RPS15
ANXA2
HAX1
PRIM2
GFI1B
LSM5
CLTB
SNRPD3
GUCD1
PDCD6IP
KMT2D
RNF6
SEC23B
PSMD6
BRWD1
DPP8
SUGT1
FAM234A
DDX1
GABPA
ATP5PF
VPS13B