ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220465 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◣ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUSP6
MMP7
KCNJ15
CEP72
CBX1
RILP
GDPGP1
CIB1
ATP1A1
IST1
MIGA1
FAAH
TTC13
NAA20
PTHLH
SFT2D3
PUM1
RINL
SGPP2
ZNF562
BCAR3
NDUFB3
FAM126B
SLC12A7
DMPK
LCN2
RBBP9
SPAAR
OTUD7A
SDCCAG8
CEP170
RNF187
ACYP2
NDFIP1
BMT2
PDE11A
SAMD12
PELATON
BHLHE40
RERE
YKT6
TBC1D22A
CLK4
NOS3
LAT2
SAMD4B
ZNF609
BSDC1
RAPGEFL1
FAM83A
BAIAP2
YTHDC2
IL18
TMEM41A
KLK11
RAB26
GOLPH3L
LIPA
GRPEL1
WDR74
IKZF3
TMEM70
SDC4
PRELID3B
CUEDC1
JMJD1C
REEP3
CEBPB
SP4
MLLT6
SEMA4B
METTL8
DCAF17
YES1
FMN1
RXRA
RAB1A
TSC22D2
PDXDC1
MKNK1
RABGAP1
SYT8
TRIM29
ZNF587B
DIDO1
GID8
TIPARP
MEX3C
GDPD5
HLA-DMA
ZNF561
TPSG1
TPM1
ADD3
PI4K2A
ANXA2R
NR0B2
CD47
ZNF233
HMGA1
TOLLIP
ORC4
MBD5
ANK3
SAE1
ARL6
TMEM216
PRKD2
WDR43
AGBL2
KIAA1841
HIBADH
CEP41
SLC37A2
PIP4P2
NBN
PPP2R3A
ASS1
YTHDF1
BMF
HNRNPD
FAM234A
TMTC2
ECI1
VWA7
DUSP22
TRAM2
LXN
QRICH1
HNRNPH1
VAPB
CATSPERG
SLC52A3
LAMA3
ROPN1
TIMM23
OR9A4
TMEM44
VRK2
ZFP91
LPXN
FGFBP3
SLC25A51
GJC2
PCTP
STAU1
MTHFD2L
HSD17B12
MAML1
RAD51D
SLC29A2
ZNF292
FAM13A
ZNF280D
SNX18
C1QTNF9
RAB30
SEC23B
TNFAIP8
BCAS1
CDK19
AMD1
SSR3
LMAN1
ZNF44
TCEAL1
LUC7L2
FMC1-LUC7L2
FMC1
P3H4
MBNL2
LRRD1
NBL1
CAMK2D
RIPK3
PIK3R1
RAVER2
CCDC130
ZNF28
PGAP2
SH3BGRL2
CTNNB1
NEK4
SLC1A5
MPZL2
PSRC1
HEXIM1
RNF144A
PRKAR1B
ZNF805
RPS7
ANO10
TMEM43
CHCHD4
C3orf14
THG1L
CIZ1
SYPL1
SLC24A1
INTS14
PDE4D
EVPLL
SF3A3
UEVLD
FEM1C
ARHGEF2
SPATA12
STYK1
ANKHD1-EIF4EBP3
ANKHD1
SLC25A28
COQ2
NUDT7
TTBK2
THAP11
TSC22D4
LRP5
ZNF226
MESP1
ZCRB1
PPHLN1
LSR
PLA2G10
BIRC3
ILDR1
WDFY2
RPL24
POF1B
SHOC2
BBIP1
CBR1
RMND5A
RNF103-CHMP3
ZFAND1
WDR5B
SYS1
ATP6V0A4
PAAF1
COA4
FGFRL1
MTMR6
CMPK2
ZHX1-C8orf76
ZHX1
CBFA2T2
STEAP4
PCNX3
PARG
RNF13
PYROXD1
TET3
PLPPR2
COL18A1
SERPINA1
PPIG
JADE1
HEBP1
HGD
TTC4
CYRIB
TP53I3
BUB1B
LEPROT
LEPR
ATP1B1
PTGES
YPEL3
WDR62
THAP8
E2F6
PRKCG
ZNF670
KYAT1
LRRC8A
BFSP1
PLD1
DAB1
OMA1
PNRC2
ITGA3
ZMYM5
RBIS
TMEM60
PHTF2
TFB2M
CNST
MAP3K3
TNFSF10
MYG1
CCN5
VIRMA
CDCA7L
ARHGEF38
CCDC150
PPA1
TPP1
MAP3K14
IMPA2
NABP1
SH2D3C
MEIS2
AKR1B10
CDK4
P2RY1
TPM4
ITGB3BP
EFCAB7
MAPRE2
YWHAB
CFLAR
OSBP
OLFML2B
NOTCH2NLC
MED24
PIK3C2B
COA7
KBTBD2
PDLIM7
EHF
FLRT3
DOCK1
HAX1
NCEH1
SLC25A13
ACP3
ATP13A4
MAGOH
SH3YL1
ACP1
KRT8
MRPL40
HIRA
TMEM59
TPM3
NDRG1
LDHB
MST1L
SPACA6
ZNF552
FAM110A
RNF24
SOD3
PPP1R8
METTL21A
FERMT1
RUSC1
PIGW
MYO19
FABP6
B4GALT2
HOXB5
SLC10A3
CAPN13
GMPS
TTLL1
ADCK2
RABGAP1L
SLC44A1
METAP1
DIRAS2
VIL1
MRPL44
UGCG
RBM7
C11orf71
NDUFA5
RNPEP
SIPA1
COMMD2
SNRPE
FAM83B
RNF39
RPL27
YARS2
DLG2
TMEM126B
HMGB1
USPL1
TPR
ODR4
SERBP1
C19orf12
NPNT
SLC5A1
MTPN
LUZP6
FAU
BRPF3
EPS8L1
SEMA3G
CMTM4
POLE4
ISG20
PAXX
SELENOH
GTF2H2C_2
GTF2H2
EPS8
SRP9
ADPRHL1
LHX4
GSN
RHOG
ASCC1
ANAPC16
TUT1
CFAP69
SRI
PLEKHB1
MET
LOXL4
STX16
ADRM1
ABLIM1
DHPS
PPP1R9A
LAMB3
SQLE
NPAS4
GPR37
SLC2A11
SESN1
SNRPB2
CEP57L1
TTLL5
ERG28
FAM200B
GPBP1L1
ELF1
WBP4
FAN1
SPAG4
PKM
TARS1
SNRNP48
BLCAP
C1orf210
ARID1A
MARK2
CDC73
R3HCC1L
TBX3
FAM98B
PTPN4
PRRC1
STRBP
LIMK1
AP3S2
TPK1
GEMIN5
INTS6L
SPTSSB
ATAD2
URGCP
UBE2D4
FZD4
SGK2
LGALS4
TTLL12
FAM133B
MED30
PCF11
CNGB1
PPP2R5B
BRPF1
EGR2
MRPL34
ZNF234
PELI1
BASP1
MTURN
SSH3
SERINC2
LRRC66
SMARCD2
GFM1
ANTXR2
GPR39
SLC39A1
F2RL1
ZBTB45
ZNF138
B3GLCT
GOLIM4
GDF5
CEP250
TMEM179B
SULT1B1
STPG2
MAP4K3
CHD1L
NMRAL1
HMOX2
LYPLA2
MSL2
WASHC5
NSMCE2
CAPG
CEACAM19
GRK6
TMEM65
APEH
CASP3
HIKESHI
PKP1
PRR15L
CAPS2
NEK2
ABCD3
ZNHIT1
PLOD3
DERL1
CCDC33
CEP85
TMBIM6
OGFOD1
NUDT21
TUBD1
RPS6KB1
MRPS28
BARX2
CTDSPL2
PPP3CA
INTS5
SHF
RAD21
TELO2
RDH16
SEMA3E
FAM227B
DTWD1
RPS20
DISP1
IKBKE
GPAT3
ADGRA3
IL15
EVPL
ATP2C2
IQCF1
WDR11
DCP1B
DR1
FKBP7
PHF12
ASPH
PTK6
UBN2
KRI1
TOR1AIP1
MTBP
MRPL13
DDX27
FER
PIGF
CRIPT
ELK1
IKBKG
SP2
ALCAM
CSF2
GTF2H2C
CAMLG
ASXL2
C1orf56
TARM1
USP53
SMARCA5
PUM2
TERF1
ACTR3
KRIT1
ANKIB1
SIPA1L2
TMEM184A
TBC1D19
DNAJB12
INKA2
DDX20
CEP57
PDE5A
METTL15
KIF18A
HOOK1
TMEM265
CSTF2
AHCYL2
TAF1A
SIRT2
NFKBIB
POLN
HAUS3
SSBP1
EIF2D
ZNF26
ADAM22
PPME1
C2CD3
NARS2
CYP3A5
DENND5B
PPP6R1
PIK3IP1
ABCC10
EPB41L5
OSBPL7
NCK1
RNF223
ATR
CRKL
COMMD6
UCHL3
INTS7
DTL
MACIR
ZNF227
RTCA
SFTPD
EPS8L3
PET117
KAT14
SASS6
TBCEL-TECTA
TBCEL
P2RY13
BTD
MLEC
C11orf49
HACL1
IL1RAP
STARD4
HSPA8
ROPN1B
PLEC
ZNF3
COPS4
THOC5
UBE2D3
PKN2
TBC1D23
TFE3
PLCXD2
STPG1
NIPAL3
CHMP4C
MRPL33
KMT2A
NUTF2
CENPT
ZNF652
GALNT12
MRPL1
TRMT5
SLC38A6
CCDC7
KDM2A
ST7
DDX11
SOS1
INSL4
SLC4A10
GTF3C5
SEC31A
FAM83D
APC
CLP1
SLC35C2
KRR1
TM9SF4
EPC1
TTLL4
ZNF225
RPL37
ANKRD54
COPS7B
DHTKD1
DCBLD2
RNF8
UNC5CL
NFAT5
OTUD7B
RTN4
NFIA
RAC2
OTULIN
DLD
MAK
LPCAT4
PFKFB3
CYP2C18
S100A4
MRPL45
HARS2
HARS1
TATDN1
NDUFB9
PA2G4
ICE2
CYB5R3
NWD1
EIF5A2
PLSCR4
SLFN5
ING3
CYP2R1
TDG
PGRMC2
C4orf36
FAM120C
UTP3
SDHAF3
LNPEP
AGL
ARID5B
INTS4
THAP9
PAPSS1
CCDC12
PEX3
ADAT2
RPS19
FAF1
C7orf25
NPAT
ATM
STXBP5
CCDC34
DACH1
RBFOX2
PTGS2
MSANTD4
SNAP47
JMJD4
ZNF212
MAD2L1BP
OGA
CMTR2
ASCC2
GTPBP2
DNAJC10
RAB10
FMR1
TSGA10
C2orf15
GPAM
CCR7
TUFT1
TBCE
CCDC9
SLC35F2
NUCB2
SDCBP2
SQSTM1
PLSCR1
MGAT4B
ZNF408
ARHGAP1
GALK2
CCNI
STRADA
ZNF56
TPD52L2
EDN1
C2orf73
SUGT1
CEP120
GCFC2
OSGEPL1
AMACR
DENR
EEF1AKMT1
CCN3
RESF1
POLDIP3
UFD1
CDC45
CD55
CCDC90B
DCTN4
C5orf34
OTUD6B
B3GAT3
MAGT1
C9orf152
GSDMB
SNIP1
WARS2
TBRG1
MUC1
ERAP1
HS3ST1
PROCR
PLA2G4B
DERA
CCPG1
C15orf65
ZSCAN26
ACCS
TAX1BP1
CD46
BNIP2
SORL1
TNFRSF11B
COLEC10
TIGD1
EIF4E2
FBXO22
FRA10AC1
EIF3F
FBXO46
ENOX2
DNAAF3
FAM131A
AURKAIP1
KIF22
ZC3H10
NUDCD1
CARD8
RAB7A
C9orf85
ABHD17B
CDIN1
DQX1
CZIB
VPS50
HEPACAM2
GCA
RTKN2
STAT3
PPP4C
PPIC
RUVBL1
ALKBH3
EEFSEC
KLHL7
GTPBP8
BTBD8
EHBP1
LAMC2
MTF2
SNX12
KIAA1586
THAP10
LRRC49
C6orf226
STRAP
SRPK1
PCLO
SDR16C5
ZNF354B
NCAPG
CDC7
MEGF8
BCKDHB
PLS1
TRMT11
CCDC30
ZNF772
LIMA1
H1-10
GBA
SNRPB
CBWD2
FBXO11
ATP5F1E
TBC1D31
ACSS1
KLF8
CBLL1
KLHL12
RNF7
GULP1
ADGRF2
GJB4
USP15
ZNF684
BTG1
CDC14B
C11orf52
IL1RN
RIN2
ENKUR
ADGRG1
NDUFAF1
CSDE1
CYP51A1
FAM111A
COQ8B
CAPN5
PRDM1
RNF144B
SLC25A45
CEP295
LIG4
ABHD13
TCERG1
PGM2L1
MPC2
DCAF6
PPIP5K2
GIN1
SIKE1
MIA3
FAM172A
WDR13
IFIH1
DCP1A
WDR36
EXOC5
AP5M1
ARIH1
SERPINI1
PDCD10
IFT57
LRATD2
DCAF1
TLR5
TOMM70
LNP1
ALDH3B2
DSCC1
TCAF1
SCYL2
DEPDC4
LMO7
CBWD5
STAT1
BBS10
RPL23A
MAL2
NR1H3
ACP2
ATL3
ITGB4
SLC33A1
MRPS14
RPF1
UBE2N
RMI1
HNRNPK
METTL7B
ANKRD36
HEXIM2
MAN2A1
RMDN1
ZNF112
ACTA2
SLC6A14
LONRF3
SLC30A6
SYNRG
RPS6KC1
IQCB1
EAF2
SBDS
SUCLG1
TMEM19
STEAP2
TMEM243
SNAPC5
KLHL20
MTRNR2L2
MTRNR2L8
NUF2
RBBP5
PAXBP1
DMAP1
ARHGAP39
NDUFS7
MED23
BAAT
NME1-NME2
NME1
COX16
RPS29
YWHAQ
ZNF117
ZNF623
TMEM242
INTS12
GSTCD
RAB37
ZMPSTE24
DCAF10
DSTYK
ACOX3
ZFP30
SKP2
LMBRD2
ZNF426
TRIP4
TTC32
TRMT44
STX18
POLR2J3
TOP3B
DPY19L4
DRG2
DNAJC25-GNG10
DNAJC25