ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402534 | MYL
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◣ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

YPEL3
TMEM68
TGS1
DUSP6
ZNF562
MTRNR2L2
AURKAIP1
BSDC1
MTRNR2L8
ITGB3BP
EFCAB7
PEX3
ADAT2
CYP17A1
DPY19L4
ZMPSTE24
ARHGAP39
ZNF426
KCNJ15
TMEM242
MED23
INTS12
GSTCD
DMAP1
NDUFS7
EHD2
PKMYT1
EIF1AD
BANF1
ZNF117
FAM207A
ZNF579
PPP5D1
CALM3
SF3A3
BRWD1
VPS13B
MRPL1
CBX1
CCDC97
DCAF10
ZBTB45
TMA16
NUF2
KMT2A
DRAP1
C11orf68
FNTA
SPIDR
FRG1
ACYP2
CCDC130
GSTA4
TGFBR2
PUM1
ZNF623
TRIP4
CD33
MAN2C1
CD47
COX7A2
REXO4
MRPS18C
HELQ
FOXJ3
ST8SIA6
TTLL12
ZNF529
MRPL15
CEP85
SNIP1
SERPINB1
SSBP1
DCP1A
INTS5
COPS7B
NR1H3
ACP2
TIGD1
EIF4E2
TOR1AIP1
YJU2
SELENOH
DUS1L
COQ3
LYN
RPS7
MTF2
RPS29
DSTYK
TMEM222
CASS4
PLEKHM3
ATAD2
RABGAP1
PRELID3B
RUVBL1
AGK
EEFSEC
RFX2
VIRMA
MTBP
MRPL13
NMNAT1
LZIC
LARP1B
LMNB2
TFPT
PRPF31
MRPS31
SMG8
MTIF2
SPDYC
UTP3
ZNF605
FEM1C
HMGB1
USPL1
GTF3C5
LUC7L2
FMC1-LUC7L2
FMC1
TRMT2A
RANBP1
NFX1
DGAT1
GTF3C3
SUPT7L
SLC4A1AP
NEMF
ING2
RABGGTA
PAXBP1
TACO1
NOXA1
BAIAP2
EXOSC9
DNAJC11
SLC25A28
ARHGEF1
FAAH
GARS1
MRPL54
APBA3
GBA
ZSCAN22
TBC1D19
CCAR2
TNPO3
FRA10AC1
MTOR
PGRMC2
USP30
R3HCC1
MRPL39
APEH
DRG2
SMG5
STX16
COX16
SNRPD3
GUCD1
PSMG1
CARD8
RTTN
PPP6R1
MOB4
PSMD8
TRIB1
TMEM41A
TMEM101
SIRT6
ANKRD24
ZFP41
RPL27
CCDC7
DPP9
NOTCH2NLC
MRPL40
HIRA
ADRM1
KDM1A
RMND1
ARMT1
GTF2H2
GTF2H2C
RAD54L2
TMEM65
JOSD2
MRPL44
HSPE1-MOB4
HSPE1
HSPD1
HUS1
TRDMT1
CAMTA2
UBC
NBN
ASCC1
ANAPC16
COMMD2
KMT2D
ZNF585A
BCAT2
ADPRS
SMARCD2
MEMO1
SIGLECL1
ILKAP
GTF2H2C_2
TOP3B
NSFL1C
PARP2
PIH1D2
NKAPD1
POLDIP3
OAZ3
MRPL9
C8orf37
TSPAN10
NPLOC4
NELFB
NIBAN3
EIF2D
ZNF783
RFXANK
BORCS8
AXL
ALG10B
ZNF391
GFI1B
DDX1
TSC1
DISC1
ARHGEF2
ZNF888
RBBP5
YBEY
MCM3AP
GTPBP10
NSMCE4A
GRWD1
SLC24A1
INTS14
C17orf75
CREM
FBXO4
TMCC1
GALK2
COPS2
PRRG2
NOSIP
UQCC1
EXOG
ANKRD50
SKP2
LMBRD2
TRAM1
GEMIN7
KDM5C
ANGEL1
DNAJB2
RPS14
FBXO22
RBIS
PEX7
MRM1
LTBR
EIF3E
TVP23B
NR1H2
HDAC2
HGSNAT
CLPTM1
FAM3C
SEC22C
SS18L2
AP1AR
IKZF4
RPS6KA1
PPDPFL
FAM227B
DTWD1
PDCD2
PHACTR4
ZZZ3
CHCHD2
RNF139
ATF4
POLE4
SLC44A1
DNAJB12
ZNF302
PAIP1
TRIM27
CCDC88A
ATP5MC3
EGR2
ZNF446
PRR19
PAFAH1B3
GDI2
FES
CARD9
CFAP298-TCP10L
CFAP298
TTI2
NUP54
PIGW
MYO19
MRPL3
MIER1
CCZ1B
ZNF114
TAF3
PYROXD1
MUC1
SMARCE1
LY6E
WDR11
ARL8B
CCDC77
KDM5A
EPN1
GTF2H4
MRPL21
IGHMBP2
ZNF350
RB1CC1
PTER
STX18
FAM133B
TFAM
SPATA5
NUDT6
ELF2
ZNF460
THAP1
SLC33A1
ZNF846
RBSN
CPT2
ZNF16
TTC32
GTPBP3
RBM28
ANO8
SRSF11
LRRC40
HDAC8
ARID1A
H6PD
ZNF561
CCDC59
AP3S2
B4GALT7
EFCAB2
EPS15
HAUS4
ZNF878
JMJD1C
REEP3
WDR36
CCNC
PRPF18
AAR2
RAD52
TIMM50
NDUFA10
CCNI
RPS20
HNRNPA1L2
HDAC1
FAM217B
ZFP14
PPP1R3D
STX8
CFAP52
FERMT3
QSOX2
SOAT1
IPO4
BMS1
NOC3L
TOX4
RAB2B
RALGAPA1
UBE2V2
ZNF829
ZNF568
NOP16
HIGD2A
EIF4A2
HAUS5
DAB2
BTD
HERC6
FAM200B
PGGT1B
PRKDC
MCM4
PSMF1
SAR1B
OPA1
PPP4R3B
IPP
RNF115
POLR3C
MOB3A
IZUMO4
RCOR1
ZNF43
CAMK1D
TMEM59
NIP7
COG8
ZBTB40
SLC39A3
DPH7
UBIAD1
PDSS1
RASGRP4
CDK5RAP1
HNRNPH1
MTMR9
SMARCC2
MAF1
GPR3
FAM83A
SRRT
CCNA2
SPATA1
GNG5
H4C12
GORASP2
MRPL16
ZNF527
HEMK1
NUTF2
CENPT
CENPS-CORT
CENPS
CIPC
NT5DC1
NASP
DNAJC25-GNG10
DNAJC25
TEFM
TDP2
ACOT13
SEC13
HNRNPD
RAB18
COA6
GOSR1
ZNF461
NOTCH2
ZNF25
TMEM183A
AGA
CRKL
ERCC6L2
RCOR3
FKBP8
MED14
ZCCHC3
MRPS34
EME2
ZNF160
ANKRD54
SCAND1
TTC4
NDUFS3
KBTBD4
TBCB
POLR2I
TXLNA
CHD1L
PRKAB2
TMEM259
MFSD8
ABHD18
HECTD1
MARCHF2
HLCS
YIPF2
TIMM29
FDX1
UBE2D2
MICOS10-NBL1
MICOS10
POLR2J3
FAM228B
ALKBH3
SF3B6
GCFC2
NUDT5
CDC123
NKIRAS1
MCUB
NR1D2
EIF2B3
TCTE3
ERMARD
SLC7A11
ZNF808
GTF3C6
ZMYM4
SEC14L1
ZNF606
LHB
GP6
PAFAH2
MRPL48
SLC35A3
LOC102724265
ZNF292
TRMU
SLC2A4
CPSF1
MEAF6
DDI2
FUT1
PDE11A
ZNF408
ARHGAP1
PES1
STAT1
DOCK7
FABP7
ATP6V1H
KANSL3
SLC39A13
CDK11A
POLR2C
EPC1
PLD3
C19orf47
RAB3IP
C3orf86
ACBD5
WAC
KPTN
TMPPE
GLB1
NFAT5
SASS6
MMAA
MFSD3
APOBEC3F
SOD2
WTAP
THOC5
ZNF805
NFYC
ABCF3
UBA5
ACAD11
CEP295
TLR5
IQUB
MEX3C
SH2B1
CDKN2AIPNL
ZNF239
HPF1
SIGLEC6
PRMT5
ZNF3
FUT10
GPN3
FAM216A
SRSF10
ARHGEF12
XRN1
MANBA
SYCN
CLK4
TPR
ODR4
NBPF1
NSUN4
BLOC1S6
YME1L1
EML3
ROM1
ZNF787
NCOR1
RABL6
CEACAM21
CDK12
RINT1
PDSS2
ANKAR
C4orf3
GFUS
NEIL3
SAMD1
BAAT
NME1-NME2
NME1
BNIP1
UIMC1
RRP15
LIG4
ABHD13
CLASP1
ZNF621
CDKN2AIP
IMPA1
RPAP1
PPID
ZNF100
HNRNPDL
ENOPH1
APOBEC3C
FAM98B
ZNF212
FAF1
SNAPC5
LXN
TJP3
RNF19A
SSNA1
ANAPC2
MND1
ABCD4
RIPK2
APOBEC3G
CNTNAP4
SESN1
CEP57L1
LARS2
AMACR
ZNF566
CTR9
PTOV1
IFT22
ZSCAN25
MED18
ZBTB6
TENT2
SLC35B2
GAR1
PTK2B
TRIM35
OSTM1
TARBP2
ANKRD13D
DCPS
NDUFAF1
ALG10
MEGF8
NDUFC1
NAA15
RPS4X
SCRIB
PAPSS1
TMEM154
TRUB2
COQ4
VRK2
PCTP
PNRC2
ELOVL1
DIS3L2
PRELID2
PHF10
RNF6
MAPK1IP1L
FAM13A
SPHK2
RPL18
MRPL58
CYB561A3
TMEM138
USP53
DMTF1
TMEM9B
TMEM17
SNRPD1
C18orf25
PTCD1
CPSF4
SMPD2
PPIL6
ZNF197
ARHGAP18
ITGA2B
SLTM
MAGOH
ADAR
ZNF398
ARL14EP
TCHP
KMT2B
BACH1
MON1B
ZFP69
RGS20
CAT
PHIP
INKA2
DDX20
ZZEF1
CYB5D2
COMMD1
CCT4
SPAG4
PLAGL1
CFAP36
PSD4
CD320
ZNF627
STK3
ZNF251
ZNF544
ZNHIT6
ZNF554
AUNIP
MRPS2
C9orf116
LRRC47
ZBTB4
ANKRD18B
POLR2A
TMEM192
THAP3
TBCC
BICRAL
GHRL
MRPS15
RBL1
RHOT2
RSAD1
CYREN
SYT7
ZNF891
ZNF10
RNF220
CLK3
RUFY2
HNRNPA3
NDUFA11
VMAC
MYBL1
RPS16
CEP72
METAP1
SFSWAP
SIKE1
STK40
RIPOR2
CLCN3
THAP5
DNAJB9
FBXO8
CEP44
WDR74
AKAP10
LTN1
UBE2D3
TOB2
MAST4
SH3GLB1
ZSWIM9
LIG1
ACADM
ARL2
LRP6
EEA1
C19orf48
SLC9B2
GALNT7
ZNF76
ASNS
PPIL4
NUDT9
ZNF586
KIF15
KIAA1143
DDX5
TOE1
MUTYH
HEATR5A
UCP2
WDR43
RIF1
NCKAP1L
PCBD2
WDR62
THAP8
PSMD14
SNX14
PITHD1
POMK
CTBP2
ZNF341
MTHFR
RNASEH1
CLCN6
RNF34
MAP10
TMEM43
CHCHD4
FIS1
RRP1B
HSF2BP
RAF1
ZDHHC5
SPATA33
ATE1
FUT4
CCDC107
PARK7
OTUD7B
ZNF611
DEPDC1B
RPS5
AQP3
DDX60L
CYB561D1
VCP
ZYG11A
GMPPA
AGGF1
MRPS16
ZNF181
LENG8
SEC23B
PIGBOS1
PIGB
DEDD
SLC35A4
APBB3
MAP1B
EXO5
DDX41
ATP5MF-PTCD1
ATP5MF
SNX25
SNCA
CFAP97
CEBPD
SUGCT
MPLKIP
ZSCAN30
AMD1
CELF1
ZNF331
EFCAB13
PPP6R2
HINT3
ZNF668
ZNF646
DDX59
TMEM267
ZFYVE9
RMDN2
TAF6
CNPY4
COMMD4
SMAD5
ATIC
AFG1L
PNKP
SF3B1
UEVLD
IGF2R
ACBD6
TBC1D13
GPATCH3
PDCL3
TM2D1
DNAJC1
ALG14
TRAM2
ESCO1
WDR87
SIPA1L3
SLC25A16
DTWD2
WDR83OS
WDR83
PABPC4L
VPS26C
GINS3
EMC4
ZNF234
FBXO42
SLC35E1
SHISA5
TTC21B
ZFR
SAE1
FCGR2A
RSPH3
AGO3
SAMD4B
YWHAQ
RAB37
PPIG
NDUFB3
FAM126B
RABGAP1L
GDPGP1
CIB1
NOS3
NPAS4
MAPRE2
ACOX3
ZFP30
TRMT44
TMEM70
RPL37
ATP1A1
POLR3B
RERE
YTHDC2
PPIP5K2
GIN1
RBBP9
SLC25A51
EIF3F
VTA1
NMBR
SFT2D3
LSG1
EPS8
BCAR3
STAT3
HTR5A
ITGA4
KDM3A
INO80C
RNF187
SNAP47
ORC4
MBD5
JMJD4
C3orf14
ILF2
ATP5MC2
SNX17
EIF2B4
TTC26
TATDN3
NSL1
RILP
SLC29A2
FGFBP3
ATR
ZNF571
ZNF540
TSEN15
IST1
MMP7
KLHL20
ZNF226
TUT1
POLR3E
GABPB2
COPS4
SCNM1
LYSMD1
NSA2
GFM2
OTUD7A
DDX18
WDR55
ATF7IP
CTNNB1
KIAA1549
SNRPB
CPPED1
RAB30
STAU1
MRPS23
NCOA7
MNAT1
POLG
ZCCHC4
MITD1
THAP11
GMPS
PSRC1
EPRS1
GRPEL2
TPM1
BRF2
ZNF609
TIPARP
DCLRE1B
AP4B1
TSFM
SDHAF3
NAA20
METTL9
DEFB124
CASC3