ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190305 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◣ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MOB1B
BSDC1
BTNL10
NFE2
WDR74
GYPB
MARCHF2
MTRNR2L2
IL1R1
GYPE
BNIP3L
MAN2A2
MTRNR2L8
C21orf58
GYPA
POLDIP3
CASS4
C3orf86
SIRT4
S100Z
POLM
PPOX
RABGAP1
ST6GAL1
VILL
HDAC6
MTRNR2L9
SLFN14
KIAA1586
ZSCAN31
TCP11L2
GP1BB
C12orf57
RGPD1
RGPD2
FKBP8
KCNJ15
DNAJB2
SAMD4A
HEMGN
ZNF451
ARHGAP39
PRAME
TMBIM1
CHCHD2
TBL1X
ERMAP
SDE2
TTI2
DNAJB4
CMIP
TOP3B
CA1
RBBP5
FAM83A
MST1
WRN
LYL1
CHPT1
TAL1
SSBP1
DSTYK
NPAS4
YPEL3
GBA
ASIC4
AQP8
CD59
HMBS
ARCN1
RUNX1T1
OR52A1
RPS7
DMAP1
TFR2
PITHD1
NUF2
KMT5A
EPRS1
CPQ
KEL
TMEM191C
AP1M1
ABCB6
MRPL40
HIRA
CBX1
PLSCR2
TRIP4
TMEM242
SELENOH
SMG8
MED18
TMEM9
MED23
RIPOR3
PPIG
UTP25
BLM
SLC38A8
H4C4
CIAO3
PCIF1
POU2F3
DDIT4
TMCC2
NUP214
RFX1
MTF2
HTR5A
PEX3
ADAT2
ABCF3
TTC39A
TMEM248
INO80C
NOS3
RBM28
C22orf24
FOXO3
NME1-NME2
NME1
HK1
PI16
TIMM10
UROD
LUC7L2
FMC1-LUC7L2
FMC1
CNKSR3
GUK1
TEPP
MTRNR2L10
RAB3IL1
HEPH
TBX19
CRYAB
AURKAIP1
SAMD4B
ZNF510
KLHL20
TMPPE
GLB1
FEM1C
VWA7
SPINK4
TRUB2
COQ4
INTS12
GSTCD
MAPRE2
NDUFA4
PPP6R1
SMARCD2
XKR7
CAB39
TATDN3
NSL1
FAM234A
HERC1
SLC14A1
PSMB6
UTP3
SACM1L
SF3A3
BLVRB
POLR3B
SAR1B
SKP2
LMBRD2
OPA1
COX7A2L
G6PC3
TRMT2A
RANBP1
TTC26
COX16
H2AZ2
ZNF562
NDUFS7
INTS5
ZMPSTE24
H4C11
PRXL2B
PAFAH2
FRG1
TMEM259
EIF2D
RHBDD1
KDM1A
NDUFAF1
WASHC2C
RHOT1
PRR5
ABCC5
USP6NL
ADPRS
H4C3
KRTCAP3
SNX17
EIF2B4
TSFM
CCRL2
TLE2
POLE4
CCDC174
ZC3HC1
SEC13
VIRMA
KNL1
ZNF391
SCNM1
LYSMD1
PRIM2
MRPS15
DRAP1
C11orf68
MITD1
FAM228B
SF3B6
CENPF
BMS1
ZBTB40
TMEM43
CHCHD4
NFXL1
DNAJB12
C8orf37
F11R
ZSCAN25
TBC1D19
ZC3H10
ELP3
VTA1
NMBR
DPP9
SMG5
SLC24A1
INTS14
ATP5MC2
EEF2K
MTIF2
P2RX6
SPI1
LSG1
AIG1
RPL27
NPAT
ATM
ZBTB45
ATP2C1
ABHD16A
SLC25A37
BAAT
EHBP1L1
GORASP2
ZSCAN12
ADSS2
UBASH3A
SPRED2
TOR1AIP1
SERPINB1
SEC22B
GTF2B
RABEP2
DHX16
TACO1
POLG
H4C12
NDUFS3
KBTBD4
RFX7
TMEM87B
ALDH1A2
POLR2J3
NECAP2
H4C8
MTRNR2L1
WDR70
MRPS18C
HELQ
ZNF408
ARHGAP1
SPECC1
CDK5RAP1
WDR36
HMGN4
KLHL12
DQX1
TMTC3
CEP290
HLTF
ILF2
KMT2D
SPN
TRIM6-TRIM34
TRIM6
PTMS
BROX
AIDA
CCAR2
RPL37
PIAS3
RHAG
SECISBP2L
ANPEP
CRKL
MAPK1
DUXB
AP3S2
STK40
FASTKD1
CWF19L2
SLC33A1
SARS1
RRP15
SLC18B1
GALK2
COPS2
ISG20
SCAND1
NCOA7
ZNF3
ST7
ADAR
PCGF5
HEATR1
ABCA3
RMND1
ARMT1
ZNHIT6
CRB1
SUV39H1
STX18
DHTKD1
IBA57
PSMD9
HPD
MRPL21
IGHMBP2
HINT3
ACTL8
MTOR
EZR
GTF2H4
INO80B
TTC33
KANSL3
PRMT5
TAMM41
CTNNB1
DCT
CCDC59
SAE1
SPTA1
ANK1
ARRB2
GPR89B
POLR3E
TUT1
ANKMY2
INTS7
DTL
AQP10
ZMAT2
FAM227B
DTWD1
CCNC
OBSL1
INHA
JMJD1C
METAP1
RHCE
REEP3
DNAJC25-GNG10
DNAJC25
ATG4C
POLR2J
NUDT9
GPR89A
MTR
SLC35B1
CALCRL
MRPL16
PAXBP1
NSUN4
EMC4
THRAP3
LOC102724265
CCDC90B
LAS1L
NCOA4
WNK4
OGT
SCRIB
CAT
RAB30
MRPL24
MAP1LC3B2
EIF3F
EIF2B3
RFT1
GCK
PDE11A
FGFRL1
R3HCC1
FAM13A
RPS14
CCNL1
SLC39A3
WDR24
SRFBP1
CYB5R4
TRMT1
NOL7
HTRA2
ZNF785
SLC44A1
RPS3A
DBF4B
DHX9
MYNN
COPS4
C11orf49
KATNA1
TAS1R1
NOL9
ABCB8
METTL2B
NOC4L
DDX51
COMMD2
GRPEL2
KCTD5
SRSF7
MBNL1
KCNH2
STX16
SNAP47
JMJD4
BHLHE40
NNMT
SMG7
DDX1
CSTF1
AURKA
NOP16
HIGD2A
AQR
NUP54
IFTAP
PUS10
PEX13
SMARCC2
ATP5MC3
SNRPE
KRR1
MAST4
ATP5MF-PTCD1
ATP5MF
STAT3
EIF1AD
BANF1
TMEM101
VPS29
RAD9B
LEMD2
TMEM64
CS
LBR
MRPL44
STAU1
PRPSAP1
MAN2A1
DDX27
RBSN
ADARB1
ATR
SRP9
ATF6
TOR1A
CEP85
SOD2
WTAP
ATL3
GP6
IPO4
COX7A2
ELP1
ABITRAM
FZD1
METTL6
EAF1
ICAM2
ANAPC5
ARMC1
PKM
FAM133B
RPL5
UFSP2
OR2AT4
HMX3
RAB37
IPO13
POLB
BCAR3
CDK12
TMA16
S100A4
CCNT1
MRPL1
NEK2
TMEM41A
MRPS31
CCDC107
SH2B1
ZNF212
YJU2
YTHDC2
RBBP9
FAF1
ATP6V0E1
MIA3
TFEB
STON2
TMCO1
BLOC1S1
DFFA
ITM2A
C18orf21
RPS19
EIF4EBP1
GABPA
ATP5PF
NGLY1
OXSM
RHD
TPR
ODR4
SDHAF3
MRPS14
SLC25A51
TSEN15
PHF21A
RSU1
SYF2
TTC32
TFPT
PRPF31
DDX18
RBM48
PEX1
AMPD3
SH2B3
CLTC
SSNA1
ANAPC2
TMCC1
CD68
GTF3C3
BRF2
NUP107
RINT1
BLOC1S5
SAMSN1
FAM200A
BNIP1
CDIPT
NUDT13
DHRS9
SPTB
MTRNR2L6
MRPS23
GTPBP10
TMEM128
PPP4R3B
LATS1
H4C15
H4C14
RCCD1
TMCO6
EPB42
CLUAP1
DHX8
RAB11A
CEP164
ZNF791
ZNF490
DLK2
MKRN3
OR51T1
PRELID3B
HAX1
HEXIM1
SMIM12
RAD52
PGBD2
HSP90AB1
GRAP2
H3C2
YWHAQ
CDK11A
PCNX3
CSRNP2
PURG
MAP3K11
TMC6
CPXM1
BAG6
SLC35E2A
MAN2C1
TTC21B
SNRPB
COMMD9
FBXO4
ATXN7L2
NIP7
COG8
ZKSCAN8
PURB
TEFM
OSGEPL1
SNRNP35
IFT46
ALKBH2
FAM162B
DCAF10
DNAJC24
DCDC1
TNFAIP8L1
ZRANB2
NDUFB7
NCAM2
LEO1
ATF3
AARS2
DNAJC11
SLC45A4
HBP1
ERCC5
EED
GTF2H2C_2
GTF2H2C
ATP1A1
MRPL45
ZNF579
SAR1A
THADA
CCDC12
NSA2
GFM2
BAIAP2
ARL8B
PRDX1
SZRD1
ALKBH7
PSMB7
TRAM2
CFAP69
DAAM1
LOC112694756
DOK3
TMEM222
RPS13
TMEM170A
VPS33A
THUMPD3
DNAJC19
SNIP1
ALKBH3
TNPO3
TRNAU1AP
FAM207A
SLC30A6
LARS2
DYNC1I2
NUP205
UBFD1
EARS2
ALDH3B1
BCORL1
PKHD1L1
RABGAP1L
UFD1
CDC45
RPL22
ITPR1
JUN
ZNF165
MMACHC
CCDC163
TMEM167B
DHX40
H2BC17
H2AC17
NR1H2
B4GAT1
ULK4
NUP153
BTG2
CILP
MRPL3
CCDC88A
RPL38
EDC4
ZNF670
H2BC8
H2AC8
INTS4
TRMT11
CDKL3
LAMTOR5
ZDHHC24
ACTN3
ZSCAN9
DCLRE1B
AP4B1
BANP
CYB561A3
TMEM138
COMMD4
DHPS
CLCN3
STXBP6
HNRNPA1L2
KDM3B
RANBP2
DOCK8
EIF2B5
MMUT
CENPQ
OR2L13
GSTA4
STXBP3
PPEF1
DNAJC2
ACP5
SHF
KAT7
FANCD2
SRRM3
ANKRD17
COQ3
OGFOD2
POGLUT3
KPNA6
SUPT7L
SLC4A1AP
ZNF846
MBTPS2
FUT3
TAF11
MED15
IFI16
ANKS1A
CENPS-CORT
CENPS
PSMB4
TRIB1
H2BC4
H2AC6
WDR11
RPS20
AGK
RETSAT
PGBD4
EMC7
ENKUR
RBM25
EPS15
BAZ2A
STAU2
PCCB
GCSAML
OR4K17
NMNAT1
LZIC
PNISR
PPP2R2A
COX7C
DMBX1
CEP120
CHMP7
HARS2
HARS1
YIPF2
TIMM29
CD2BP2
BRAF
ATG4D
TPK1
YARS1
S100PBP
AHCYL2
RPS27
ZNF280A
ZCCHC4
RBM45
NVL
ARHGEF1
CWC25
AMBRA1
DDX41
PTPRCAP
EXOSC6
SRP19
FAM178B
MDC1
RNF145
PACC1
GNB2
NDUFC2-KCTD14
NDUFC2
TRMO
C1orf74
FAM168A
TUFM
YME1L1
STOML2
PCBP2
TMBIM6
PARK7
SNX12
PDSS2
MRPL53
SDAD1
JRK
MYO18A
PAK1IP1
C6orf52
TRMT5
SLC38A6
ACBD6
CACYBP
DEF6
SUMF1
SUN1
NR1H3
ACP2
USP15
TSSC4
CHEK1
ALS2
CFAP298-TCP10L
CFAP298
N4BP2L2
PPP6C
VAPB
TTC14
HSPA6
RHOG
DPH5
KYAT1
SEM1
LINGO1
PIK3R3
POM121
FNBP1
FRA10AC1
RILP
TTC4
FOXJ3
GPN3
FAM216A
MVB12A
TMCC3
SYCP2L
PRRG2
NOSIP
METTL8
DCAF17
SLC27A4
PLS1
ACVR1
LIN54
EEF1A1
ZNF862
NSUN5
LTA4H
TM9SF4
UCHL5
RO60
AIFM1
TIMM50
ABT1
BRK1
PPCDC
ITGB3BP
EFCAB7
HUS1
LSM5
NUTF2
CENPT
TOMM6
AP2S1
ADPRHL1
DNA2
MOB4
IQSEC3
NFE2L2
KLHL18
KIF9
PNPT1
PTPA
CRAT
HSD17B11
NUDT3
MS4A6A
TIPARP
ANKRD40
RHOT2
ZNF554
PDE4C
CSTF2
NUDCD1
ZNF74
ZNF460
GPN2
TMEM209
CDK19
AMD1
PPP1R11
LONP2
ABCC11
SETDB1
MUC1
LRRC63
TPRG1L
GAB3
GTF2H2
MRPL42
UGGT1
PPIL2
PPP6R3
TMEM18
MBTPS1
SLC8A2
H4C9
ALG10
MRPL39
MRPL58
VPS25
DMTN
TIGAR
MCCC2
ZNF770
TNRC6B
INO80D
BOD1L1
SNAP29
PI4KA
KCTD20
KIFBP
PXT1
CEP72
EIF3E
MLEC
GFM1
TCTE3
ERMARD
TOMM20
IQCH
AAGAB
LARP4
USP9X
ZKSCAN4
DHRS12
LGALS8
ZNF225
FDXR
H2BC15
H2AC15
IGF1
U2SURP
TMEM208
LRRC29
TIGD6
HMGXB3
CEP350
CREBL2
PRKCI
CRADD
CENPW
ACOX3
TRMT44
MKNK1
BOLA2
POLR1H
RARS1
SLX1B
SLX1A
BOLA2B
THAP7
RIC8A
BET1L
PSMD5
MRPS33
MED4
SCP2
PNPO