ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976389 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◣ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
COL4A6
COL4A5
ZNF408
ARHGAP1
SUPT7L
SLC4A1AP
BSDC1
KCNJ15
GABPB2
KDM3A
ATF7IP
MTRNR2L2
YPEL3
CDIPT
PAXBP1
ZNF571
ZNF540
UBB
SMG5
RPS26
PPIL3
NIF3L1
TCTEX1D4
BTBD19
AHCYL1
HDAC8
CALCRL
PIH1D2
NKAPD1
THG1L
RPH3AL
KAZN
CLPTM1
GTPBP3
CCNI
RPL27
PRPSAP1
CELF1
SSBP1
PPP6R1
ZDHHC6
VTI1A
INTS5
AURKAIP1
ARHGAP39
RGPD1
RGPD2
EIF2S1
ATP6V1D
MAST2
POLR3A
NOL12
LRIG2
RCAN1
NEK2
SLC39A6
TFPT
PRPF31
HAX1
ABRACL
KDM5C
RBBP5
ZNF302
ITFG2
GTF2H4
LY6K
MRPS33
CREM
SLC33A1
ZNF585B
IL17F
DUSP6
RABGAP1
ISY1-RAB43
ISY1
IFTAP
TMEM242
STK40
GPC6
CDK12
PDE12
ZNF383
RAD51AP1
C12orf4
FAAP20
IGFL4
DMAC2
SLFN12
COPS4
SELENOH
TTC26
CEP120
LACTBL1
TNPO3
ZW10
NDUFB3
FAM126B
ARMCX5-GPRASP2
ARMCX5
RERE
NEMF
MMACHC
CCDC163
PDE4DIP
ZNF790
MTF2
NBPF1
STC1
COX7A2
TRIM5
SNIP1
C1orf174
TBL1X
INTS2
CGGBP1
C3orf38
SF3A3
HEMK1
CCDC130
C3AR1
WDR83OS
WDR83
DNAJC16
ZNF56
GLIPR1L2
YWHAQ
SNRPD1
UBE3B
UQCRC2
SIRT3
PSMD13
COIL
DYNLRB2
ILF2
PACSIN2
AKR1A1
COX16
CHMP7
RBM25
TRMT11
MRPL54
APBA3
PLEKHG1
ZSCAN4
AAAS
GBA
EIF3F
AP1G1
RABGAP1L
CD2BP2
IFI6
TYSND1
RMND1
ARMT1
MTR
DDX42
CCDC47
RFFL
RNF207
BAIAP2
RPL11
ZNF793
TUFT1
PHF5A
ACO2
STAT3
MRPL1
ZNF566
EPRS1
RNF125
HEATR1
CYB561D1
RPA2
ZMPSTE24
LSG1
TBC1D19
REXO4
ZNF335
DYNC2I2
MICALL1
ZNF461
TM2D1
USP9X
CEP162
CASP10
NME1-NME2
NME1
LRP6
PSMB7
ZNF331
PCNP
JMJD1C
CCNC
ZNF623
PPRC1
PSMB5
SH2D5
WDR55
USO1
ZNF226
INKA2
DDX20
AIFM1
MTBP
MRPL13
AASDH
EIF5A
SUGP1
MAU2
TIMM10
MED11
SLC25A53
SESN1
CEP57L1
B4GALT3
SCARB1
CPN2
TMEM259
RSPH3
NAV2
TUT1
ZBTB40
TPK1
VPS35L
TIMM9
KIAA0586
UBQLN1
SLC35A4
APBB3
PLK3
TTC31
CCDC142
NCOA7
RCAN2
FNTB
RFXANK
BORCS8
PRKCSH
CCDC151
UFC1
ZRANB2
NOL8
CENPP
ADRA1A
CLASP2
KCTD9
CDCA2
XPNPEP3
ST13
ANKRD1
BORCS7
FRRS1
SIN3B
KLK10
FEM1C
CCDC97
YTHDF2
EIF2AK3
EIF1AD
BANF1
MED18
TRMO
C6orf118
NDUFS7
ZFP30
CLCN3
CSNK1E
ZNF300
PREPL
CAMKMT
PEAK1
HMG20A
EXPH5
ELSPBP1
GTF3C3
ZKSCAN2
NIP7
COG8
NRL
DCAF11
PEF1
ZSCAN22
PLS1
SLC39A9
ERH
SLITRK5
TRMT1
KMT5C
SH3BP4
DNAJB12
KDM1A
CSTF2T
IRF9
C19orf25
CLN3
TCIM
PPIP5K2
GIN1
ZSCAN30
TFB1M
GPX1
CNPPD1
RETREG2
NME7
BLZF1
STX12
ZSCAN23
GTF3C5
UIMC1
STAT6
SIRT4
LZTR1
FRA10AC1
MNAT1
SMIM12
PES1
TBCB
POLR2I
ZNF165
CMSS1
TTLL12
TRUB2
COQ4
UFD1
CDC45
PSMD3
ALG14
EFHD1
KAT7
FCRLA
POLD4
RBMS2
C19orf48
ZNHIT3
PLK2
CCDC74A
MDC1
RGL2
CLASP1
ZNF221
CD320
HOXB13
RHOT1
HBS1L
GPATCH3
IPO4
TEFM
SUGCT
MPLKIP
CELF3
INO80C
YJU2
SCYL3
SMG8
PRPF18
TMEM128
ZBTB8OS
RBBP4
GAPDH
RBL1
CCNG2
CALM2
CZIB
OSBPL8
ADGRL1
IFI44L
WDR11
TRAPPC8
HACD2
HSCB
CHEK2
MAN1C1
DMAP1
CORO2A
SLC1A3
PIP5KL1
TM9SF4
TMBIM1
LIMA1
ABCF2
AARSD1
TRIM16L
SULF1
TBC1D22A
ZNF14
NECAP1
ROCK1
DLAT
FURIN
NKX3-2
RPS29
ZNF829
ZNF568
DNAL1
KIF20A
BRD8
WASF2
NRDE2
SPR
MTRNR2L10
CCDC174
CBR1
DDX41
CACTIN
SLC7A11
ZNF24
TXN2
RUFY4
SULT1C2
VPS13B
SF3A1
CCDC157
APOL2
ATXN7L3B
UTP18
MBTD1
TBC1D1
SASS6
ANKRD17
CENPA
MRPS18C
HELQ
NOP16
HIGD2A
RBM45
ZNF791
ZNF490
ABCD2
RPF1
PIK3CB
CFAP298-TCP10L
CFAP298
MRPS23
TIGD1
EIF4E2
CEP85L
PNISR
PLEKHG2
G2E3
CCDC59
MRPL48
ZNF2
GALM
ATP2C1
PEX3
ADAT2
TTC14
VPS52
RPS18
LURAP1
GTPBP2
SMAD3
CPPED1
SFSWAP
ZZEF1
CYB5D2
PIKFYVE
EFCAB14
SLC25A44
PIGL
TOMM40
GTF3C6
KIAA0319
CREB3L2
ABI3BP
FAM234A
MEGF8
DNAJB4
ZNF260
FGD4
SULT1C4
CALCB
PRSS23
DHDDS
FOXP4
USE1
RPS14
CLTC
DHX16
SRSF1
ZFC3H1
THAP2
METTL1
EEF1AKMT3
LIMCH1
UTP3
GORASP2
SECISBP2
TAF13
ZNF708
BRCA1
ADIPOR1
CLCN4
SLC35B1
TMEM69
FAM199X
IFT46
EIF3E
SOD2
IPO13
WTAP
PPOX
DYNC1I2
SNX3
HIRIP3
MCCC1
PLPP5
PMF1-BGLAP
PMF1
RPS7
RIF1
IFIT3
FBXO16
ACOX3
TRMT44
PAFAH2
BANP
NEK4
THOC5
SCP2
RPL26
FDXACB1
C11orf1
COPS7A
LYPLA2
S100A13
LRIF1
NAA38
CYB5D1
INSYN2B
S100A1
SEC16B
PKD1L2
RUVBL1
FAM13A
CCDC107
PEMT
ACBD4
RCC1
ARMC1
MUC1
NEURL4
ZNF576
IRGQ
ALDOA
CDRT1
STX18
KANSL3
FBXW7
CD55
HAUS6
NAPA
SULT2A1
ATG4C
ANK3
TIMM50
ZNF416
TCF3
FOXO3B
CES3
RBM42
GCNT2
ARHGAP18
LSM5
ATP5MC3
GOSR1
SPHK2
RPL18
PRKAG2
WDR5B
CASP8
UBXN7
WDR75
ZNF573
PTPA
CRAT
AMOTL1
WASF1
ZNF506
CDC40
NHS
FHL1
PSMA1
SRSF4
TAF12
NUDT5
CDC123
VPS45
MRPL27
EME1
ACP3
FUCA1
MAT1A
ZBTB45
MOB4
NR1H3
ACP2
DDX46
ARL14EP
AP3B1
SLC18B1
DNPEP
RPAIN
NUP88
BRD4
DNAJC25-GNG10
DNAJC25
BNIP1
HEXIM1
TRPC4AP
RIMBP3C
RIMBP3B
CRNKL1
CFAP61
PMVK
CSTF3
AIP
CDK5RAP1
TMEM101
YARS2
INPP4B
GABARAPL1
TMEM222
NDUFS3
KBTBD4
SNRPD3
GUCD1
BCL2L13
SPEF2
CDK5RAP2
CCS
CCDC87
PDE4B
VWA5A
TMX2
MED19
SCGB1A1
COMMD2
POLG
TARS3
WARS2
REPS1
AMPD3
WDR89
EGLN2
HTR3A
TTI2
PUS10
PEX13
C2CD5
OSGEPL1
USP22
PDK2
SBNO1
ANK2
COA3
CNTD1
CHST4
SMARCD1
NUDCD3
SPNS1
ELOVL1
NSUN3
DHFR2
KIF2C
ZNF806
DTX3
NOS3
MRPS14
RPS19
UBE2Z
EXD1
CHP1
MFN2
ZNF142
BCS1L
ZMYM6
DCLRE1C
AGPAT4
SYNJ2BP-COX16
SYNJ2BP
CENPH
NSA2
GFM2
CDK19
PHB2
GTF2B
KDM8
BAZ2A
ARHGAP9
MARS1
EXOC5
AP5M1
ZNF687
CTH
MFSD6
ARHGAP11A-SCG5
ARHGAP11A
C11orf52
SCAND1
INO80B
ZBTB20
ATAD5
ANXA11
SPAG9
CUEDC2
ZNF764
ACSL1
COG7
SLITRK1
NEBL
DRG2
FAM228B
SF3B6
SLC35E2A
KXD1
MBNL2
ZNF215
SLC29A1
LHFPL1
HMGB1
USPL1
WDR74
RPS3A
TMBIM6
CCT8
GAPVD1
TNFRSF19
PAM
USF1
ACOT7
RPL23A
SNU13
TNFAIP1
IFT20
PRKAB1
ARL6IP5
ZNF599
ERGIC2
LMNTD1
GRIPAP1
BCHE
RPL29
UBOX5
FASTKD5
VPS33A
PCNX3
CACHD1
MAP3K11
AP3S2
SREK1IP1
CWC27
SLC25A28
LRRC34
CARS1
TTF2
TBC1D9
PTCD2
MRPS27
STING1
CCDC74B
SLC30A10
C1orf158
DNAJC12
CRKL
KRR1
DNAJC11
MRPS15
ZNF585A
TMBIM4
MVB12A
GOLPH3L
ARL17B
ARL17A
IRAK1BP1
SLC35D1
DDI2
PNO1
NXT2
GLRX
MTFR2
ADGRF4
PUM1
RTTN
C17orf75
ZNF510
GCLM
TAF15
MPDU1
LOC100996842
NDUFA9
AKAP3
ELP5
CTDNEP1
FAM124B
NOCT
EXOSC5
BCKDHA
TBX18
GHDC
PLA2G4C
SELENOP
CYP19A1
NECAP2
EXO5
PRRG2
NOSIP
NAT10
KIF15
KIAA1143
PSMD8
ZNF484
ACBD5
TAOK2
SELENOF
HS2ST1
SH3BGR
PRMT1
GBP2
GGTA1
SCNM1
LYSMD1
ARRB2
PPIL4
OXSR1
PPP2R5C
CD164
RBCK1
KIFBP
ZNF593
C1orf232
PPIG
ZNF391
ANO8
POC1B-GALNT4
TSR2
RPL32
RHOJ
SLC2A14
SMAP2
PDE7B
MDM4
UBQLN4
LAMTOR2
NUCKS1
DHRS4
DNAI3
LMNB1
ASXL3
ATP6V1E1
IQGAP3
VTA1
NMBR
THAP10
LRRC49
ARHGAP19
CHD9
ZNF253
SAMD4B
CLUAP1
RPL38
DHX8
MAP7
MEOX1
RESF1
POLR1H
FBRS
UBL7
PIK3R2
GRN
CSRNP3
RRAS
KIAA0408
EVA1B
CCNB1IP1
BMERB1
ATP5MC2
ZNF527
PDSS2
HIPK1
COQ3
CCDC43
MRTO4
FAM160A2
EMC1
MRPL35
RAB30
PLEKHM3
ZNHIT6
SNX12
GPR137
EEF1AKMT2
PLCH1
CHD8
PSMB6
ABCB8
VGLL4
BPNT1
RTCB
FAM71E1
EMC10
NSUN4
VPS26C
MRPS16
CREBL2
ACVR1
CHEK1
MED24
MLF2
IFT74
ERAL1
SYCP2L
PHB
CA5B
MTIF2
SNRPB
ADPRS
RPL22
MRPL45
FAF1
SETDB1
FKBP8
ANKRD13C
KBTBD3
AASDHPPT
ZNF254
RUFY1
DONSON
DHRS9
AP2A1
RPL19
DLX4
RBM5
TBC1D17
AKT1S1
KATNB1
PARK7
DEDD
CENPF
COASY
IPP
FAM161B
COQ6
LYRM2
CENPW
MYBBP1A
NFIA
IQCG
ORAI3
RPL35A
ALG10B
AARS2
SEC23B
C12orf73
ZNF518A
SF3B5
CCDC90B
ZNF613
B9D1
RC3H2
FOXP1
FBXL19
TLN1
CREB3
PAK1IP1
C6orf52
MAPK7
DACH1
TMUB2
MYBPHL
AGAP3
IGFL2
ZNF292
INTS4
MAN2A1
PRRC2B
TXLNB
UBXN4
CEP350
ZNF700
CLASRP
GREM2
COPS7B
RABGGTA
MTOR
GNAL
DYRK4
YLPM1
PPWD1
CENPK
PDE6D
TMED5
CCDC18
TRIM38
ESM1
FGFBP3