ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823128 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◣ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

STARD10
IPO13
CTU1
PHF13
C1orf159
RANGAP1
TBC1D23
POLR2J3
AURKAIP1
CALCOCO1
RAB5C
DESI2
INTS9
HMBOX1
GTF2H4
SDCCAG8
CEP170
TNFAIP1
IFT20
EIF1B
DHX34
RPGRIP1L
FTO
LOC100289561
TIMM13
MEA1
KLHDC3
PES1
HEXIM2
TIMM22
IFRD2
RTTN
PSMC4
CCDC59
JOSD2
PACC1
NOLC1
TMEM245
MRPL24
CLIC4
ZNF56
SCNM1
LYSMD1
NOL11
ENDOG
TSSC4
RALBP1
ZNF565
ZNF146
SEC11C
PAFAH2
LRRC37A3
CFAP20
MMACHC
CCDC163
PHB
CCDC174
TSN
NUDCD1
PANK3
FEM1A
PSMD3
ZNF286A
STXBP3
EFCAB2
L3MBTL1
KPTN
RBAK-RBAKDN
RBAK
C19orf25
ZNF444
TMEM208
LRRC29
GNAI2
SNX27
SUGCT
MPLKIP
PNKD
CARM1
ZNF189
MRPL50
TMEM115
AAMP
FNTB
DUS3L
CHMP4B
EEPD1
GORASP2
BTRC
ZNF585A
NAA80
HYAL3
CIPC
CHD8
MICOS13
HSD11B1L
KNTC1
CLPB
SLC4A2
CDK5
AP2S1
TPR
ODR4
CDK13
DHX16
RAD23B
PSMD2
AHCTF1
SH3GLB2
SNX3
CHFR
NDUFV1
ZNF235
SAC3D1
ANO10
WDR62
THAP8
MRPS22
RMND1
ARMT1
CHMP5
BAG1
ZNF559-ZNF177
ZNF559
BOLA1
GOLGA5
INO80B
RPL5
LANCL2
PRCC
FIS1
VPS35L
ZSCAN22
C11orf49
STK25
DNM1L
GSK3A
SPHK2
RPL18
ACIN1
C14orf119
BRMS1
RAD52
PSMD8
COQ8A
QTRT2
CCDC191
FAM133B
ZNF566
NPAS1
CBWD5
CXXC1
SERF2
ZFYVE19
DNAJC17
TMEM127
CIAO1
SERTAD3
CACTIN
RNGTT
COX16
EPRS1
ZW10
TMEM59
SMUG1
SLC37A4
DDX11
CLP1
MRPL48
IPO7
ZNF268
ZC3H11A
IFT88
RETSAT
UBR2
BAX
OCEL1
PRPSAP1
SLC35B4
FBXL19
P4HA1
RPS27A
CLHC1
ZFYVE1
KMT5A
PPP1R12C
TTC13
ZNF527
CBR4
UBXN7
TTC31
CCDC142
PRMT2
C16orf91
GSPT1
ZNF599
ATL3
PCM1
SDR39U1
SOX6
C11orf58
AP2M1
SKP2
LMBRD2
SMIM13
THOC3
MRPL17
CCT8
ARRB2
AHCY
FAF2
C12orf43
GFI1B
TSC1
VPS26C
MAD2L1BP
GTPBP2
SLC33A1
RPL26
TSNAX
C5orf24
DMAC2
ORMDL3
MAP2K7
ABI1
TAOK3
NUF2
RAB18
INKA2
DDX20
SF3B5
TAF5
DCAKD
PSD
ZNF420
ZNF773
USP32
NMT1
ZNF473
DIXDC1
VRK3
EEF2KMT
HEMK1
ZNF25
HNRNPA3
SF3B2
CDK12
SURF6
OGA
EEF1A1
POLK
CERT1
NFXL1
CCDC146
RPS12
PPP4R3B
ZFP14
RB1CC1
PHF12
B3GAT3
MRPS31
RILP
SERBP1
GDAP1
PPP1R12B
FBXO46
SMPD3
TSNAXIP1
RANBP10
BANP
FBXO34
INPP5A
NOP14
GRK4
ZNF225
NOL6
ANKRD10
ZNF586
RCOR3
MRPL38
INTS10
SLC39A11
SYMPK
FOXA3
SH2D3A
PLK3
DYNC2I1
COX14
RELL1
SCAF1
WWOX
ATP5MPL
ZNF461
UBQLN4
LAMTOR2
ZNF79
DDX47
SUCLG1
FZR1
TMUB2
ZNHIT2
ZCCHC4
C10orf88
RIF1
GOSR2
ZNF891
ZNF10
TMEM18
RPS6KB2
LARS1
SMU1
INTS4
PEMT
ELMOD2
ZBTB37
MTCH2
C6orf136
CHAC2
PFKFB4
SEMA4F
COPS4
WDFY2
CDC27
ZC3H3
SAFB2
SAFB
SH2D6
ZNF350
TIMM10
RTEL1
POLR2H
CNPY2
YWHAG
STYX
SCAI
CHKB
ZCCHC8
R3HCC1L
KLHL12
ERCC4
PDCL3
SLC25A11
RNF167
ZNF383
PLD3
C19orf47
THNSL1
ALAD
TRIM28
RAB1B
NDUFS7
TSGA10
C2orf15
CEP164
LRIG2
VPS50
HEPACAM2
SF3B1
SMG1
CMTR1
ZNF84
HARBI1
ATG13
UBTD1
MMS19
CEP128
ECSIT
TMEM222
CDK11A
THYN1
ACAD8
ZNF585B
MUC1
CDK11B
TMTC3
CEP290
CLPX
HSPA13
PHF23
GBA
SIRT4
SERP1
EIF2A
NEURL4
ZNF576
IRGQ
ACP6
ZC3H4
CEP20
SLC25A20
TCOF1
EFTUD2
CCDC103
RNF14
ZHX1-C8orf76
ZHX1
TMED4
SRRM2
ATF2
MIGA2
PCBP2
PTCD1
CPSF4
CDK5RAP3
ZNF416
MARK2
NACA
FAM126A
ZNF284
FYCO1
UBXN4
TRIM59
MAK16
ECH1
NME1-NME2
NME1
ZNF331
PA2G4
POLE3
C9orf43
THTPA
CEP97
PPP2R5D
MTIF2
PPP6C
THRAP3
MCCC1
BLVRB
MYORG
SPTBN4
POLR2E
DOP1B
ZNF408
ARHGAP1
FRG1
B9D1
RRP9
PARP3
HSPBP1
MAPK7
TMED7-TICAM2
TMED7
ASNSD1
ASDURF
EEF1G
MEN1
SETD3
CCNK
EIF3F
MRPS14
GLIPR1L2
CYP20A1
PRKCSH
CCDC151
SRCAP
LOC730183
CCAR1
ZNF589
STRIP1
PIK3R2
ATP6V1F
SESN2
GMPPA
PARP2
DNAJC16
CUL2
SKIV2L
NELFE
RAB5A
EFHB
VDAC2
WDTC1
ALKBH5
CTNNBL1
SETMAR
SYNGR4
GPANK1
CSNK2B
CAPN10
TSEN34
MBOAT7
CCAR2
TIAL1
MFN2
PSMD1
SIVA1
OSCAR
NDUFA3
DIABLO
POMT2
GSTZ1
TOMM70
LNP1
RPL7
RDH10
BRF2
DCLRE1B
AP4B1
RPL29
SNAPC3
NRL
DCAF11
TMEM199
POLDIP2
NHEJ1
SYCE3
CDK8
NBEAL1
ATG5
ZNF212
AAAS
ERI1
ZNF451
RAB1A
KBTBD7
MPI
CNIH1
RNF43
RPL18A
ZMAT5
UQCR10
CCDC130
SH2B1
WDPCP
MDH1
C19orf48
RAD51AP1
C12orf4
C7orf25
TUFM
SLC35E2A
UTP23
DIMT1
UTP6
SLC25A19
TAOK2
ZNF772
PSMD12
USP14
DNAJB12
CPPED1
TMED1
ZNF335
PSMD11
MRPL45
BORCS7
MVB12A
GAPVD1
CAAP1
TPRKB
CDK5RAP2
SCAMP3
GATB
ZNF140
THOC6
HCFC1R1
ZFPM1
GTF2H2C_2
GTF2H2C
CCDC77
SRP54
ZNF337
TFB2M
CNST
TRIM23
TRAPPC13
SHLD3
DCAF1
ZNF7
ZMPSTE24
HMGB1
USPL1
BNIP1
METTL9
SESN1
CEP57L1
STRADA
MKNK1
EIF3D
VKORC1
BPNT1
STAT2
ESCO2
RPS11
NTAQ1
RPL27
CDC73
ARMH3
MRPS35
PKN2
TERF2
APC
FAM220A
UBFD1
EARS2
RPL35
ARPC5L
NEURL2
CTSA
WDR87
SIPA1L3
MZF1
CD82
ZNF419
SLC39A13
ALG10
COMMD1
GSN
TBCB
POLR2I
AHCYL2
RAB14
SDHB
ZNF787
HTRA2
SRPRA
THEM4
CTDP1
UBE4A
DDX23
LUC7L2
FMC1-LUC7L2
ICE1
RHBDD3
EWSR1
DCAF12
REXO1
PARD6B
L3MBTL2
CBX8
HSPE1-MOB4
HSPE1
HSPD1
TIPARP
APEH
TAF12
YIPF2
TIMM29
RSRC1
VCPIP1
C8orf44-SGK3
UBE2J2
ORC4
MBD5
RBM28
TVP23B
RWDD1
ZNF180
ZNF446
ARNT
ABL1
YPEL5
RPL23A
SKAP2
IRF7
PMM1
DRG2
ADSS2
BCAS2
DNAL1
ZNF417
NRTN
C12orf29
RALGAPA2
DCP1B
PPRC1
CD55
RABIF
ZNF573
CC2D1B
BARD1
HINFP
CCDC150
ZNF567
PPP4R3A
ZDHHC12
NIPSNAP1
ZNF274
PSMB7
MFSD8
ABHD18
IBA57
ZNF26
MYBBP1A
AOPEP
ZNF133
LEPROT
LEPR
AFG3L2
PPP1R35
DELE1
SAMD8
EIF3E
YTHDF2
MARCHF2
KIAA0895
FAM160A2
INVS
ERP44
SEPSECS
HPCAL1
MBD1
SPRYD3
EP300
TCF19
CCHCR1
TTLL12
VTA1
NMBR
SNX17
EIF2B4
MGST3
TRAPPC3
USP35
KCTD21
MORC3
PPA1
SNF8
PLEKHB1
PARS2
LYSMD4
ADPRS
RRP15
LZTR1
NUDT15
TIMM50
PGRMC2
UHRF2
RAB10
ZNF468
SGTA
ATP5PO
TSPAN17
TOMM20
ATP6V0D1
ATAD2B
CCDC6
EIF5A
NKIRAS1
RPL15
TSACC
CCT3
ZNF749
MIB1
SAE1
PPOX
PKD1
C2orf42
SPAST
RTL10
GNB1L
VTI1B
POLE4
IPPK
NAPA
SLC10A7
SH2D3C
DENR
LCORL
ASH2L
ZNF878
ZNF845
DDX41
DEDD
ZFC3H1
THAP2
MINDY2
ZNF605
CCNT1
ARL6IP1
MTIF3
TOGARAM1
KLHL28
USP19
PITPNB
SPAG1
PRRG2
NOSIP
XPC
LSM3
POLR2J
NOL7
CFAP410
MGRN1
KMT5C
DECR2
POLD1
ZNF169
CCDC24
RIN1
TOMM40
CMSS1
ZNFX1
SMG8
SEC22B
CSTF2T
EIF2S2
PDCD6
SLC17A5
PABPC1
GRSF1
SHBG
BDH1
FXR2
TMEM214
DNAJC25-GNG10
DNAJC25
RPS20
MRPL42
SLC35A4
APBB3
PBLD
HNRNPH3
NUDT5
CDC123
MEIG1
ELP5
CTDNEP1
FBXL12
MBTPS1
DYNLT1
TOR1AIP2
GALK2
COPS2
KIF2C
TMEM87B
MAN1B1
GPER1
LRRC42
HSPB11
DNAJC18
PAXBP1
MTR
ZZEF1
CYB5D2
SETDB1
KIFC1
S100A13
RGL1
NAMPT
MATR3
ARPC5
CHTOP
COX5B
PITRM1
RHEBL1
CISD1
HSP90AA1
ST20-MTHFS
WDR20
HOXC6
HOXC4
GOLGA3
RPS6
FAM200B
PGM2L1
SLC39A7
RXRB
ZSCAN32
ZNF174
TXNDC17
KIAA0753
EIF3C
EIF3CL
IKZF4
ZNF134
FAM135A
GATAD2A
MESD
ZCWPW2
AZI2
GINS3
SMIM26
LETM1
NIFK
ELOF1
KDM3A
HNRNPD
TMED2
SIRT6
ANKRD24
IMPA2
KIF20A
BRD8
DGAT1
MLF2
ITSN1
COX7A2L
CRYZL1
ZNF574
SMARCAL1
TTC12
TOR1AIP1
GMPS
MICU2
PI4K2A
UNK
RAB8A
SHPK
CTNS
GABPA
ATP5PF
MRPS15
ZNF184
PTK6
TEX22
TCF25
TNFAIP8L1
GOLGA7
TMEM102
NOP16
HIGD2A
SRSF11
LRRC40
VPS52
RPS18
BIRC6
GFUS
MCM3
ZNF557
SNAPIN
DNAJB1
WDR59
TECR
TMEM141
ZER1
COG2
RMDN1
STAM2
DNAJC19
ZNF606
ANKRD39
RNF5
AGPAT1
RAVER1
MRPS23
SACM1L
NDUFA6
CNOT4
ERGIC3
N4BP2L1
TOX4
RAB2B
SRRT
WDR75
LPCAT3
FBXL18
ZNF776
BTD
SDHAF3
HACL1
ERCC5
THAP12
GVQW3
EBAG9
CCS
CCDC87
DDOST
SENP2
RTN3
SPATA24
MYPOP
MED23
ZNF846
ASNS
CZIB
SEC22C
CSNK1A1
NKTR
FDXR
ELP6
TTLL4
RANBP3
MOB3A
IZUMO4
TRMT1L
SWT1
MON1A
POU2F1
ANKRD54
PCTP
CYRIB
COX7C
OSBPL11
NPRL2
CYB561D2
DNAJB4
TARS1
FUBP1
POLR3B
ZNF292
ABHD16A
PDHX
APIP
ASXL1
RAB8B
METTL8
DCAF17
PTGES3
CCNL2