ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799522 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◣ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
YPEL3
ZNF562
ZNF426
GBA
POLR3E
AKAP10
POLG
ILF2
ACYP2
DPP9
B4GAT1
CEP85
PRMT5
DUSP6
SACM1L
KNL1
ZNF839
HSPA6
ZNF561
FAAH
CEP72
LTA4H
BCAR3
TIA1
RAB11A
METTL26
NCOA7
H4C8
LUC7L2
FMC1-LUC7L2
FMC1
BAAT
STX16
PAXBP1
INTS12
GSTCD
COX16
C8orf37
FEM1C
SHF
EPS8
DCAF10
ABCG1
RAE1
ALOXE3
KLF14
MRPL44
ELF1
WBP4
PPEF1
YWHAQ
GSTA4
ANG
RNASE4
FBXO31
DMAP1
ZNF605
CYP4F11
PASD1
ANKRD54
ZNF827
NOD1
RAD54L2
IL1R1
ANXA2
STX18
ZNF529
ZNF382
ITGA4
RTL6
ARHGAP39
PPP6R3
ZNF117
GTF2H2C_2
GTF2H2C
DUS1L
COMMD2
DCT
NDUFS7
C17orf75
POLE4
MRPL21
IGHMBP2
WDR24
PUM1
NUF2
NME1-NME2
NME1
ZNF623
TOP3B
MED23
PCDHGB6
GNL3L
SNX16
IL2RB
STX6
GTF2H2
ING2
FRA10AC1
HMGN4
RPS7
DPY19L4
RCC1
DCP1A
DEFB124
GSPT1
ACOX3
TRMT44
HERC6
ALG10B
C12orf57
OTUD7A
NOS3
GTF3C3
SET
IPO4
ZFP30
STAT6
TMTC2
RBPJ
MLEC
RPS29
ZNF391
DUSP4
PEX3
ADAT2
POLR3B
FRG1
PTPRCAP
KMT2A
NCOA3
FAIM
GALK2
COPS2
COPS7B
DRAP1
C11orf68
SLC8A1
GEMIN7
CDK1
RIPOR2
RBBP5
NPAS4
KAT6B
ACTL8
PRELID3B
SLC39A13
DLEC1
SPATA13
USP30
ALKBH3
SSBP1
CD47
MRPS18C
HELQ
PAFAH2
NOXA1
S100A4
BTD
EIF2D
MTF2
ANKRD40
TACO1
KIF27
BSDC1
CLK4
PLEKHM3
LASP1
CBX1
CASC3
TRMT61B
AURKAIP1
DLK2
TBC1D19
ZMPSTE24
RPS20
AAR2
CRLF3
NDUFAF1
RBSN
PARP1
DNAJC25-GNG10
DNAJC25
RNF146
AGK
ENDOG
HMGB1
USPL1
PCID2
CUL4A
GTF3C5
TGFBR2
FAM207A
EIF1AD
BANF1
RPL27
LNPEP
SELENOT
FOLR3
SF3A3
HOXC5
SMARCD2
INO80C
GDPD5
ZNF737
WDR43
RESF1
SLC24A1
INTS14
RPL37
ZNF44
ZNF408
ARHGAP1
GTPBP3
ANO8
JAML
ITGB3BP
EFCAB7
MRPL16
TFPT
PRPF31
KIAA1549
TMEM43
CHCHD4
PHF21A
CPPED1
DRG2
KMT2D
NOTCH2NLA
SERPINB1
STOML2
RFX7
WDR36
SELENOH
KANSL3
ADRM1
PCDHGB7
SUZ12
ADD2
MAN2A1
TMEM222
TSEN15
TDP2
ACOT13
CFAP298-TCP10L
CFAP298
MNAT1
DDX1
SAR1B
IQSEC3
CLUL1
FAM227B
DTWD1
PARP2
SNRPD3
GUCD1
TMEM242
DSTYK
TOR1AIP1
BMS1
ZCCHC4
SUGT1
LSG1
TIPARP
VAPB
TEFM
TSFM
EPS15
DHX33
NOTCH2NLC
C11orf49
STRADA
BCL9
AP3S2
TPGS1
PPM1A
PCDHGA3
YBEY
MCM3AP
RABEP1
CD5
BNIP1
ZNF350
ZNF570
ZNF569
YAP1
CCDC97
RALBP1
PSMG3
TRIP4
CDK5RAP1
HDAC1
ZNF606
PCDHGB5
SNIP1
DGKZ
VPS36
NAB1
ELOVL2
SARAF
H2BU1
H2AW
ZBTB45
TMEM65
CTNNB1
PCYOX1
PSMF1
EIF3E
CASS4
ZNF808
PSMD3
SNRPB2
TMEM41A
MRPL19
SETD1A
C3orf86
ZNF846
LIG4
ABHD13
PIGW
MYO19
SDCCAG8
CEP170
ZER1
ZNF28
CFAP69
SNAPC3
GDPGP1
CIB1
OSBPL8
PGK1
TMEM259
RRM2B
STAT3
TTC26
RMND1
ARMT1
SIRT6
ANKRD24
CTSC
UBAP2L
C1orf43
NSFL1C
ADPRS
SMG7
NDFIP1
ZNF518A
ZNF579
SLC25A51
METTL9
TVP23B
MED16
SEMA4D
DLX3
MITD1
AGGF1
PRSS27
TNFSF8
PCBP2
PRKAG2
LOC102724265
SECISBP2L
KCTD5
ZNF280D
NFAT5
INKA2
DDX20
PHB2
RARS1
ARHGAP31
POLDIP3
RTTN
CCNC
BRWD3
MRPL3
CYB561D1
KAT6A
TMEM183A
ZNF234
RFX2
ORC4
MBD5
ATR
ERCC6L2
ABCA3
GABPB1
CRKL
USP3
OTUD7B
UBE2G1
SNX1
ATP6V0E1
MED18
VWA7
FGF9
ZMYM1
PDE11A
MAD1L1
MAF1
ZCCHC3
RAPGEF2
TRAPPC12
MRPS31
RUNX2
NFE2L2
CCDC77
KDM5A
CCDC59
MRPL58
FAM50B
TUBA1B
ZC3HC1
FITM2
MRPL40
HIRA
WDR74
SENP1
PFKM
ADGRE5
MAPK1
LRCH1
PTPN22
ZNF781
NBN
SMAP2
TAB1
ANKRD13D
PPIG
VTA1
NMBR
RBM45
GPAM
WDR47
NDUFA6
PDE8A
KPNB1
ABL1
LRRC37A3
NDUFC2-KCTD14
NDUFC2
PDCD2
SMN2
SMN1
UTP3
WDFY1
TPD52L1
ZNF879
RPS14
GNB2
GTF2B
ZNF24
RNF122
NSD3
SMG5
ZNF770
NARS1
CEP41
RPL31
RNF139
PIK3R2
EXOC2
ZSCAN31
HNRNPA1L2
OGT
RABGGTA
TYSND1
VPS13D
FAM221A
RABGAP1
NDUFS3
KBTBD4
KLLN
ITGB1BP1
CPSF3
AP1S2
BOLL
ZNF461
MTRF1
NAA16
RRN3
KDM3B
FIS1
NDUFA4
ZNF501
EPC1
NINJ2
HTR5A
PPA2
SLC29A2
MEX3C
GAPVD1
SCNM1
LYSMD1
YTHDF2
COMMD1
MED13
TATDN3
NSL1
MTBP
MRPL13
LRP6
RPL5
SRRM3
TNFAIP8L1
MTERF1
EXO5
CLTC
ADAR
RUNX1
NSA2
GFM2
FAM98B
RAB5C
C2CD5
ZNF341
ZC3H6
ZNF585A
VPS72
MBTPS2
SRP54
REX1BD
ZBTB40
CHD1L
PHIP
PRKAB2
XKR7
PET117
KAT14
ANO10
JRK
COG3
SMG6
SS18
ABHD5
FOXJ3
NUTM1
NOP10
ZNF554
CITED2
AZIN1
RPS3A
TMA16
DNAJC14
KIF21A
NXPH3
SERF2
ELL3
DOK2
ZSCAN12
TMED2
GNAL
EFCAB2
BOD1L1
TDRD7
PPP3CB
ARIH2
COA6
INO80D
TAF7
SLC29A3
ZNF549
KRTAP4-6
DPP8
ACBD6
ZNF331
TIGD6
HMGXB3
B3GLCT
CCDC114
CFLAR
ZNF829
ZNF568
HUS1
TRAM2
GOLGA3
ZBED5
RAB37
MOB4
PEMT
TOB2
KMT5B
MRPS2
C9orf116
SF3A2
PLEKHJ1
SEC13
GLIPR1L2
MTOR
CPLX2
MARCHF7
RSRC1
BATF
SMU1
TSC22D4
ZFP14
H4C15
H4C14
MTIF3
MRPS23
MAN2C1
RNF6
VPS29
RAD9B
ELP1
ABITRAM
DDX18
CYP20A1
CABIN1
EMSY
SKP2
LMBRD2
CREM
CFAP20
ASF1A
NKAP
C9orf40
MRPL39
YARS1
S100PBP
PPME1
C2CD3
MORF4L1
SLC44A1
KLHL20
RHOT2
RIPK1
B3GALNT2
SMARCC1
MRPL1
TRAM1
PSTPIP1
SMARCC2
PPIF
NCBP3
WARS2
UCHL5
RO60
ADNP
SNX5
MGME1
NSMCE4A
ARID1A
FBXW2
PLCL2
ZNF91
NFKB1
ZBED4
XCR1
VPS37C
FAM133B
DCLRE1B
AP4B1
ATG4C
TTLL4
TOMM5
CSRNP1
FAR1
AMZ2
MAT2B
EIF4A3
SFT2D3
U2SURP
NGDN
CIAO3
TMEM63B
MRPL14
COQ2
ZNF805
MAML2
TIGD1
EIF4E2
TRDMT1
NOTCH2
CALM2
MMADHC
ZNF599
RBM17
STAMBPL1
CDC25C
FAM53C
SUN5
CTTN
MS4A6E
SLTM
APEH
NUTF2
CENPT
TRIP12
FBXO36
KBTBD6
SYTL3
UBE3D
SCAND1
MRPL48
CCAR2
DCTD
ZNF239
LPAR6
HLA-E
SECISBP2
SPRYD4
CASP8
GDPD1
ARHGAP30
SLC25A36
SLFN13
MDFIC
BACH2
GABARAPL1
TPK1
BRWD1
ZNF76
ASNS
ZNF398
TACC1
ZNF425
TNFRSF10A
JUN
OR1F1
NMNAT1
LZIC
HIF1AN
AGO3
MTHFD2
GOLGA8A
LRG1
SEC22B
DHX8
GPR137
CNOT4
DEF8
SLC25A35
ZNF649
EIF4A1
ZNF800
ATG101
NOTCH2NLB
TMEM30A
EIF5A2
PCM1
ZNF181
FBXO22
MAPK14
TASOR
NIPA2
MAP3K4
FZD9
SMYD3
ZNF528
VAMP4
LSM5
RNF13
NXPE3
ARHGAP25
INTS5
MED4
NDUFAB1
TXLNB
RGPD5
CEP135
RGPD6
RGPD8
SAXO1
RRAGA
HNRNPA3
WASF2
OTUD4
THNSL2
FCHO2
CDC5L
DDHD1
REXO2
ZNF596
JADE2
SLC39A10
GABPB2
CDC73
RFFL
XPC
LSM3
FAF2
DDX60
WDR82
SMG8
TBL1X
TNRC6B
ZNF302
TRAPPC5
NCAPD2
MRPL51
RPN1
IL16
SRSF5
LSP1
DNAJC5B
RPS15
CEP85L
RNF125
FCHSD2
TSPOAP1
FGFBP3
IST1
SNRNP35
GTF2I
CCDC130
COPS4
TMBIM4
CDKN2AIP
OCIAD1
ITGAL
ATG5
ZNF527
CSDE1
ZMYND11
ZNF268
SPOP
CXXC1
CMTR2
ZNF257
SNX17
EIF2B4
ZNF292
ARL6IP5
PROSER1
NHLRC3
WWOX
MEMO1
GGACT
PRKAB1
YTHDC2
REXO4
CCDC66
RUNX3
AQP3
OTOP1
RERE
NAA20
GABPA
ATP5PF
ZZEF1
CYB5D2
INTS10
RNF145
EIF2B5
CRADD
ZNF140
DNAJC10
USP44
SAMD4B
DHRS13
CYP51A1
INTS4
WDPCP
MDH1
UBE2Q1
ARF6
RSRP1
H1-2
ZKSCAN2
MRPL38
NDFIP2
RUBCN
APH1A
ZIK1
TUBGCP3
NDUFC1
NAA15
PRPF18
CLN5
ZNF668
RAD50
CEBPG
ALMS1
SH2B1
TUFM
MORC3
ATIC
APMAP
ZZZ3
CCDC107
ZNF22
ZNF226
ZNF609
RAB18
PSMD6
TCTE3
ERMARD
SPEF2
ANKAR
SSNA1
ANAPC2
UBE2D3
MTMR9
RSF1
AAMDC
CAPRIN2
ICE2
TM7SF3
RABGAP1L
CBLL1
SLC9A3R1
AOAH
CLPX
SNRPE
WDR7
ZNF266
DNAJC6
ARHGAP22
EML3
ROM1
HSPE1-MOB4
HSPE1
HSPD1
PALB2
DCTN5
PARP4
NFX1
ERLIN1
KRIT1
ANKIB1
LIN9
TRUB2
COQ4
GRPEL2
ABCD2
VIRMA
TSSC4
ERLIN2
DBR1
TRAF3IP3
BRF2
MFAP3
FAM114A2
ACVR1
CEP63
ANAPC13
RARS2
ORC3
PPP6R1
PJA2
RNF14
AHI1
NCBP2AS2
NCBP2
THAP12
GVQW3
CENPW
NDUFAF6
INTS9
HMBOX1
KDM3A
ACTR3
IL1RAP
C10orf88
CNPY3
LRIF1
EXOSC8
RB1CC1
LRFN2
TRIAP1
PRR14L
ZNF354C
PDE4A
ACCS
MTRNR2L2
MTRNR2L8
TTLL12
JMJD1C
NDUFB3
FAM126B
MAPRE2
TTC32
TMEM70
POLR2J3
SLC33A1
ATP1A1
PPIP5K2
GIN1
RBBP9
CAT
DNAJB12
REEP3
EIF3F
SUPT7L
SLC4A1AP
GTF2H4
CAMK1D
RNF187
SNAP47
JMJD4
C3orf14
ATP5MC2
RILP
NEMF
WDR11
ZNF571
ZNF540
MTIF2
MMP7