ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474298 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◣ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
KCNJ15
UBC
MTRNR2L8
NUF2
TTLL1
CCDC130
RERE
LOC102724265
TTLL12
MTRNR2L2
DCP1A
GBA
BSDC1
ITGB3BP
EFCAB7
RABGAP1
NPAS4
HTR5A
SLC24A1
INTS14
SLC44A1
STX16
PCDH1
DRG2
ZNF623
COMMD2
ZFP30
ZNF76
FAM207A
NWD1
PEX3
ADAT2
TRIM9
YTHDC2
GNAL
GTF2H2C_2
GTF2H2
POLE4
CADPS
APRT
ZNF670
MTF2
SUB1
EIF2D
FAM227B
DTWD1
RAD54L2
SLC44A2
DOCK7
WDR11
GALK2
COPS2
SAMD4B
ATP1A1
DNAJC22
SSBP1
FAM72C
INTS5
RBBP5
PDE7B
TRIP4
SF3A3
TPM1
SCRT2
ATP5MC2
STX6
PSMF1
INTS12
GSTCD
IPO4
NSFL1C
ATPAF1
ALG10B
PGBD2
NDUFS7
NRF1
STX18
DCAF10
DNAJC25-GNG10
DNAJC25
CCNC
MRPL16
UIMC1
MFAP3L
FUT8
SRGAP2B
FAM72D
TRIM29
PDE11A
GTF2H2C
SRRM3
DRAM1
JMJD1C
REEP3
MKRN2
NDUFS3
KBTBD4
GABPB2
TMED1
ZNF205
PAXBP1
HMGB1
USPL1
MRPL3
PRMT5
GEMIN5
GLTPD2
RPL27
RNF24
NTSR2
DPY19L4
ANKRD40
WDFY1
FAM72A
SRGAP2
AURKAIP1
TACO1
VPS13D
DMAP1
B4GALT7
TVP23B
TPBGL
TMEM41A
TRAM1
BARHL1
USP30
MED23
LRRC59
RPS29
SLC39A13
NFAT5
SEC22B
RGPD5
RGPD6
EXD2
SEC13
LRRC37A3
EEF2K
DSTYK
FOXO1
WDR36
ZER1
RBBP8NL
C10orf88
BCL9
BCAR3
TSNAX
TCF7L2
HMOX1
KMT2A
ATR
MTHFD2L
AKAP13
CREG2
RHOT2
POLR2C
PRELID3B
RGPD1
RGPD2
PPA2
DYNC1LI2
RPS14
TATDN3
NSL1
MNAT1
DUSP6
DCLRE1B
AP4B1
ZNF697
FAM72B
SRGAP2C
ISM1
CBX1
HUS1
CDC73
GNB2
MFAP3
FAM114A2
PRRG2
NOSIP
AQR
LRRC10B
EPS8
DHX8
ANKRD46
ZNF829
ZNF568
OPA1
TMEM259
PDE4C
PPFIBP2
SNRPB
HERC3
PYURF
PIGY
NEUROD4
LUC7L2
FMC1-LUC7L2
MRPL44
EIF3F
CEP135
TCF3
DLG2
SLC33A1
TOR1AIP1
GRPEL2
REXO4
YPEL1
TMA16
ZNF354B
FRG1
DUS1L
TEFM
TSEN15
PPP6R1
EPRS1
TUBGCP3
SPATC1L
DYNC1I1
MAPK1IP1L
CRLF3
TRIM16L
C16orf89
ZNF527
DAG1
CALM1
CABIN1
DHTKD1
CPLX2
SMARCD2
IQSEC3
TMEM39B
DRAP1
C11orf68
RRP15
FUT10
ATP5MPL
CYREN
CHD1L
PRKAB2
TJP3
FXN
PHKG1
GTF3C3
CLUAP1
TOP3B
IRF9
SIKE1
WWOX
CLK3
ZNF621
TNFAIP3
USP54
FECH
TRMT61B
UTP11
XKR8
RNF149
KRTAP10-7
CEP72
AGK
FAF1
CAPN2
TMEM242
NCOA7
ALKBH3
VPS13B
LAMP1
FAR1
ZNF438
ZMIZ2
TMPRSS11F
RPS7
TTC26
BRF2
SDHAF3
EP400
C10orf95
C9orf152
ANXA11
TP53I3
IGSF9
ZNF286A
ANKRD52
TTC32
SLC25A51
TDP2
ACOT13
FAM98B
DDX1
CCDC107
LARS2
PLEC
GTF2H4
LPCAT4
ZNF197
UBA52
CIAO3
DPH6
TBCD
ZNF557
HPCAL4
INO80C
CCAR2
ZSCAN22
ANKRD36
FNTB
CAPS2
NRG3
RPL37
DISP1
TDRD7
B3GLCT
FRAT1
C5orf49
AQP4
CLDN8
PPIP5K2
GIN1
ILF2
ADRM1
MRPL38
FAM71E1
EMC10
RILP
CTNNB1
TBL3
MGST3
PDS5A
BLOC1S5
MYO9B
HAUS8
MED12L
NME1-NME2
NME1
C8orf37
ZNF350
YIPF2
TIMM29
STRBP
ASCL5
TMEM43
CHCHD4
JOSD2
MRPL55
LTB4R2
LTB4R
CIDEB
AP3S2
ABCA3
NUP155
RNF7
UCKL1
SESN1
CEP57L1
CGGBP1
C3orf38
B3GAT2
RPL6
SAYSD1
FZD1
PTPN11
LUC7L
TMEM222
TIPARP
AARS2
ASB6
PYM1
ACKR3
RAPH1
ADAM22
WIZ
FAM162A
CCDC58
NAA60
TMEM68
TGS1
TPR
ODR4
KRTAP12-2
TBC1D19
TUT1
HSPE1-MOB4
HSPE1
HSPD1
SNRPB2
COG2
SELENOT
USP22
SFT2D2
SNAPC2
CASZ1
NDUFB3
FAM126B
SLC39A3
KMT2C
SQSTM1
MGAT4B
KANSL3
FAM133B
GCFC2
HARS2
HARS1
PLK1
BPTF
CLN6
UTP3
CPPED1
DNAJC11
TSPAN10
NPLOC4
KDM3B
CCDC174
RSAD1
TMEM248
SNX18
TMCO1
RASA2
NSUN3
DHFR2
ADPRHL1
CACNA1E
SNRPE
TBPL1
CYP51A1
CRNKL1
CFAP61
FOXN3
PSEN2
PUM1
PTPN4
SNX19
DPH7
ZNF891
ZNF10
SMPD2
PPIL6
MT1X
ZNF721
PIGG
CFAP45
AASDH
HMGN4
MLST8
C11orf52
FRMD5
PRR15L
MAPRE2
POLR3E
BNIP1
DGKZ
CITED2
GALNT10
CCDC69
SLTM
ZNF331
RBBP9
GTPBP3
ANO8
PET117
KAT14
KNL1
ZNF529
ATXN2L
C7orf25
EIF3G
WDR41
MDM4
TET3
RNF11
DLC1
POGK
SLC37A4
ZNF354C
SIGIRR
BIN1
TRMT5
SLC38A6
DHX16
DDX46
MAD1L1
HES3
NAXE
NBN
MTR
TARS3
VAMP4
FAM3C
ZNF33A
RGL1
CCDC112
HOXB9
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
PLAGL1
CFAP36
MFSD4B
MKRN3
VWC2L
C1orf115
YPEL3
SUPT7L
SLC4A1AP
C17orf75
NMNAT1
LZIC
RNF145
ZNF879
NPL
CD8A
IRF5
ANKRD62
MRPL1
MRPS18C
HELQ
METTL9
RBM28
EXOC2
ERI1
SAXO1
RRAGA
WASHC5
NSMCE2
VPS37D
FKTN
DNMT3B
IAH1
HNRNPD
FBXO22
TRAF6
RAG1
SYT7
VPS25
TNFAIP1
IFT20
ZNF582
TMEM18
SPAG8
NHSL1
IGFBP3
MRPL21
IGHMBP2
RPS3A
PRR14
WDR7
MTG1
NDUFA2
IK
SRGAP1
MARCHF11
IL13RA1
FGFBP3
RNF6
PABPC4
ZSCAN9
GDF11
MAP3K13
ZMYM3
DPP9
NDUFAF1
CLUL1
FKBP5
SARAF
VANGL1
PDHB
RBPJ
SLC16A1
NUDT17
CDK5RAP1
KLHL20
RALBP1
MIER1
NDUFAB1
IBA57
RARS1
CYP2R1
ANGEL2
ERCC4
NLRX1
GGCX
TLL2
C4orf48
FRMPD1
CYP4B1
ZRANB2
ERMP1
ZBTB26
MRPS31
BANP
CYB561D1
CRBN
ZNF554
MSL2
NOMO3
SPATA18
NOMO2
BTG1
ZFYVE19
DNAJC17
YWHAZ
SMPDL3B
LRRC26
PPIG
SNX17
EIF2B4
NOTCH2NLC
POLG
PRPF18
CELF1
RABIF
ARHGAP22
ZNF484
L3HYPDH
JKAMP
STK10
ACO1
TSNARE1
BARX2
COX16
FRA10AC1
CASC3
ALG10
DPP8
PPP1R8
BACH2
DISC1
ZNF326
C3orf80
ZNF530
ASL
ISM2
SPATA22
IGIP
NOP16
HIGD2A
NDUFC2-KCTD14
NDUFC2
NUP214
ARAP1
TIMM9
KIAA0586
TMEM106B
FAM50B
NUDT7
VPS4A
PDAP1
BUD31
VPS28
DUSP4
GINM1
ADRA1A
RAB3C
SCOC
TTC4
WDR70
RBL1
PSMA1
MRPL34
ZNF219
GPCPD1
LRRC37B
PTBP2
SORL1
DOP1B
ZNF441
ARHGAP28
CTSH
COIL
CEP126
MRPS22
TCAIM
RNF135
TMEM14A
SPCS1
GLT8D1
GPAT3
MALL
STAT3
TIGD1
EIF4E2
ZNF383
ZNF839
KANSL1
JRK
ATG16L1
ZGRF1
LARP7
C19orf53
XRN1
RANBP3
GUF1
ZNF77
RHBDL2
MAGOH
MRPS14
CLTB
U2SURP
OGT
EDC4
CRB1
CNOT6
GDPD1
RMND1
ARMT1
ZNF609
ZZZ3
YJU2
ZC3H6
MDC1
COMMD6
POLM
UCHL3
ITM2C
FSIP2
ACAD9
VAT1L
SNAP47
JMJD4
DDX18
NUP54
CRKL
CBWD5
UCHL5
RO60
TSC22D4
WASHC2C
TBRG4
RBM17
LINGO1
FAM47E
COX10
PAG1
HEATR3
FAM47E-STBD1
CREG1
SELENOH
NUP107
NOTCH2
CYP20A1
RPL10A
ARHGEF12
ZNHIT3
PKIB
NUFIP2
TXNDC15
SEMA6A
FOXRED2
RUFY1
BEND3
EML5
H4C8
TOMM20
ERLIN2
SECISBP2
PDE4D
RMDN2
C1QBP
DNAJC1
HAUS5
PRKN
PACRG
LRRC8B
FAM151B
SMKR1
FAM124A
SORBS3
FAM228B
SF3B6
STOML2
C7orf26
ANKAR
GTDC1
GFUS
SARS2
MRPS12
SPOCK1
BTBD11
RNF223
MRPL40
HIRA
KCTD5
PRMT3
KCNH1
GCLM
TRMT11
PDSS2
RNF220
SPEF2
PSMC1
DEF6
CFAP410
IL11RA
PKIG
TBCCD1
XYLB
PER3
DST
BEND6
PLA2G2C
PRRT1B
FRMPD2
FMC1
WDR43
COX7A2
SOD2
RIF1
ARL8B
HEMK1
SLC27A4
ADPGK
EIF5B
ANKRD36B
FITM2
TXNDC9
NDUFA12
HERC5
PRMT2
UBA2
SPTLC2
TRIM8
ZFHX3
KLKB1
ZMPSTE24
NSA2
GFM2
TSFM
YTHDF2
CIZ1
RESF1
DNAJC24
DCDC1
RETSAT
THOC3
PDE8A
SRI
CDC7
MAPK8IP3
LRP12
SUDS3
TMEM185B
PRKACA
LGMN
MOB4
MITD1
PPIH
BUD13
BAZ2A
EDEM2
HASPIN
TBCE
EXO1
CBFA2T2
TNFRSF10D
TMEM106C
NSG2
ADCK5
GCH1
SP6
KRTAP10-6
FEM1C
LSG1
SACM1L
GOSR2
MCOLN1
PLD3
C19orf47
TUBE1
FAM229B
MALSU1
DAD1
ZNF624
YOD1
LPIN3
HSD17B4
PFKFB2
SCAND1
C18orf21
NOXA1
EIF1B
ATAD2B
ATP23
PARP16
SDK1
CPE
TMEM70
FAM234A
AMN1
DSE
RGPD8
TCHP
TLCD4
CXXC1
RNF43
TLCD4-RWDD3
RPAP1
LOC100287896
LIPT2
SLC66A3
ZNF232
ZNF71
TSPYL4
OTUB1
VPS39
DNAJB12
NAA20
GPAM
ZNF827
SMIM12
BORCS7
ATP6V0D1
MAF1
ERCC5
PPIL4
ZNF585B
PRKAG1
STYK1
DDX23
NCOA5
MON1A
DAAM1
ZDHHC21
GSX1
ELMO2
EVPL
LNPEP
PARK7
ZNF212
STXBP3
RBM25
SHF
UGGT1
INAFM2
BBS1
AKR1A1
INTS1
SLC25A21
NAGPA
CHRNB2
CSRP1
PLPPR2
NUP85
MCC
MAN2C1
R3HCC1
MEMO1
STC1
PTCD1
CPSF4
HLCS
CENPF
FBRS
FAM172A
FLYWCH2
TIGD2
ZNF277
DOCK4
SOCS1
ATP6V0C
CD300LG
CCDC59
TPK1
SNRPD3
GUCD1
STMP1
ELP1
ABITRAM
KIF15
KIAA1143
HSPA6
ATP5MF-PTCD1
ATP5MF
C3orf33
SLC22A5
ARID5B
DPY19L1
PCLO
UBE2E2
MNX1
SCNM1
LYSMD1
NR1H3
ACP2
PLEKHM3
RBSN
YES1
ZNF180
ARL6IP1
DTD1
REXO1
LRP10
HPS3
ZNF429
RGS3
SUCLG2
UPP1
HCN1