ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826859 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◣ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MTRNR2L8
MED23
ITGB3BP
EFCAB7
DSTYK
MTF2
NUF2
POLR2J3
TXNIP
WDR11
FRA10AC1
TOR1AIP1
C18orf21
SEC13
NDUFS7
DCP1A
GOLGA3
SF3A3
EIF2D
STX6
TMEM222
SSBP1
DCAF10
YARS1
S100PBP
INTS12
GSTCD
METTL9
CCNI
BSDC1
KMT2A
STAT3
PRPSAP1
REXO4
GBA
TOMM22
ZSCAN30
MRPL39
RNF187
NUP54
LRRC59
SLC24A1
INTS14
NDUFS3
KBTBD4
DNAJB12
MRPL44
AURKAIP1
TCF3
CASC3
GTF2H2
GTF2H2C
NME1-NME2
NME1
GTF2H2C_2
SMARCD2
TATDN3
NSL1
TTC4
SLC25A53
STX16
RPS7
BRWD1
PIK3R3
TSNAX
SNAP47
JMJD4
NOC3L
TARS3
DHX40
SPATC1L
MRPS31
RAD54L2
IPO4
TMEM242
AGK
CCT2
SUPT7L
SLC4A1AP
USP30
DRAP1
C11orf68
EXD2
HMGB1
USPL1
PIH1D2
NKAPD1
INO80C
TRMO
NOTCH2NLC
ZNF76
LRP6
SLC44A1
STX18
TVP23B
DRG2
EIF1AD
BANF1
TTC26
PEX3
ADAT2
IPO13
HEMK1
MCOLN1
PAXBP1
MRPL48
FRAT1
UBC
BANP
GOSR2
DR1
MRPL27
EME1
BMS1
ZMPSTE24
TOP3B
FLCN
DTWD2
CDON
RPL37
NSFL1C
FBXO22
SELENOH
DMAP1
TUT1
AJUBA
MRPS23
TMEM101
DPY19L4
TSEN15
RPL5
TACO1
WASHC2A
RBBP5
THEM4
PLEKHM3
TRDMT1
DYNC2I1
HDAC2
SLC39A13
AP3S2
FOXJ3
RWDD1
PARK7
PDAP1
BUD31
ZNF408
ARHGAP1
GTF3C3
SLC39A6
TMEM39B
PSMF1
KAT6A
UTP3
PHIP
RPL27
RPL38
ATXN7L2
NUP205
KANSL3
PCDH9
NPAS4
SLC35A3
SNX17
EIF2B4
ALKBH3
POLR3B
C21orf91
ZNF165
SAR1B
CCNC
EFTUD2
CCDC103
GTF2H4
SOD2
WTAP
TPR
ODR4
NOL12
CLN5
PRPF18
SDHAF3
TBPL1
ZNF397
ZBTB45
UROS
BCCIP
GFI1B
TSC1
FAM207A
TIGD1
EIF4E2
TBC1D19
KCTD9
CDCA2
SUDS3
ZSCAN22
C12orf73
TEFM
IBA57
LUC7L
VPS25
COX16
HSPE1-MOB4
HSPE1
HSPD1
PET117
KAT14
YTHDF2
TTLL12
ABCA3
ALKBH5
MFF
WDR70
PTDSS1
MTERF3
SMG7
PSTK
WASHC2C
GPR180
ATG101
CCNG2
ZNF24
TTC28
NR1H3
ACP2
C10orf88
GEMIN7
PNPLA6
SUMF1
CCDC97
MITD1
PSD
NR1H2
CZIB
INO80B
MTIF2
MRPS15
PDCD6IP
ARRDC4
MAPK1IP1L
EIF3D
SPNS1
CCDC59
MRPL21
IGHMBP2
MAN2C1
CYP51A1
FEM1B
POLE4
CDK19
VPS13B
AMD1
HDAC8
LMAN2
DDX1
KCTD5
N6AMT1
SPDYE14
SPDYE10P
ZNF576
IRGQ
NUB1
SNRPE
DISP3
SLC33A1
SCAND1
ATR
SNRPD1
LRRC37A3
UBE3B
SEC22B
COG2
TM2D1
L3HYPDH
JKAMP
MRPS7
GGA3
INTS5
HUS1
CHD1L
PRKAB2
MKRN2
THOC3
ZNF48
TBC1D13
FRG1
MRPS33
SETD1A
CALM2
PRMT2
ACBD3
TM2D3
TXN2
ATF7-NPFF
ATF7
ECSIT
RPS20
DPP8
NBN
RUVBL1
EEFSEC
STOML2
RRP15
HLCS
FMNL3
RAB11A
COMMD6
CLK3
ZNF862
BRPF1
NCBP3
SIKE1
MTERF1
KLHL20
GORASP2
TCTE3
ERMARD
DISC1
ZNF212
BBS1
COA6
RFXANK
BORCS8
CSNK1D
MRPL40
HIRA
CDK5RAP1
ALG10B
NOP16
HIGD2A
TSC2
NTHL1
ZER1
AKAP10
SLC39A3
FZD1
ARHGEF1
DOCK7
ZNF444
TRIP4
SUGCT
MPLKIP
SNRPD3
GUCD1
VAMP4
TNPO3
THG1L
MIER1
SIRT6
ANKRD24
DNAI4
GHITM
ARL8B
CCDC88A
ARMH3
DCP1B
TOM1
VTA1
NMBR
PDXDC1
GTF2IRD2B
ZNF219
AAR2
HEXA
ENSA
WDR36
GPAM
TRAF6
RAG1
CLPB
TRIAP1
VPS37B
PAFAH2
RSPH3
DDX59
MSANTD2
CBX1
SNRPB2
MTPN
LUZP6
UCHL3
DCXR
C17orf75
GTF3C5
RNF125
NLE1
STARD10
BRF2
SAYSD1
SS18
IMPACT
NCDN
KIAA0319L
NDUFB3
FAM126B
HNRNPA1L2
BIRC5
MIS12
DERL2
UNC13B
TMEM41A
AARS2
MED4
ESCO1
NUDCD3
CTNNB1
DNAJC11
CIAO3
TXLNA
POLG
CLTC
U2SURP
SMG8
GFM1
TRNAU1AP
VDAC2
ZNF609
OTUD7B
PTS
TIGD6
HMGXB3
MBTPS2
CENPN
SRCAP
LOC730183
ITGB1BP1
CPSF3
TCAIM
SLF2
YY1AP1
DAP3
ITFG2
COIL
RPS4X
PHACTR4
HCFC2
GLT8D2
MFSD14A
MOB4
ABCB10
BNIP1
RBL1
ZNF326
WDHD1
SOCS4
UTP11
ZNF23
AHI1
PRKRA
PJVK
KRR1
RBM28
GOSR1
SCYL3
TAF3
ZNF790
INO80
RBFOX2
MRPS36
NOXA1
PIGO
RABGGTA
PLS1
DNAJC28
PPP6R1
SENP1
PFKM
LRCH4
FBXO24
RABGAP1
ZCCHC4
NBPF1
SERBP1
PSMG1
MRPL16
CYREN
ATAD2
PRMT3
NOTCH2
TCP11L2
RCOR1
EXOC6B
STMP1
RABIF
BCL9
KIAA1958
C9orf147
TBCK
AIMP1
COPS7B
DHX8
ZNF518A
ATG4C
NDUFB7
HAGH
FAHD1
SEC11A
ARMC8
MRPL3
ASNS
VPS72
ZFYVE27
ZBTB40
MRPL42
SLC25A28
ATP5MC2
TSFM
TAF12
NEK2
GTF2H3
EIF2B1
BZW1
MIS18A
CFAP221
GABPB2
SNRPB
ZNF391
MTR
PEMT
ANKRD13C
LOC389831
IGSF9
NFAT5
NDUFC2-KCTD14
NDUFC2
PRR14
SH3GLB1
CCDC43
CIC
MPI
NECAP2
B4GALT3
TFAM
MYCBP2
NDUFA11
VMAC
DNAJC9
CD164
STX4
ZNF561
ACBD6
ZC3H6
EDC4
UFSP2
C2orf42
RMDN2
STT3B
HDAC4
COMMD2
EFCAB2
SMN2
SMN1
DCTN4
MRPL55
ATP5IF1
BLOC1S2
DDX18
SACM1L
PSMD6
SRP9
ZNF2
PDE4A
FOS
GALK2
COPS2
ATP5MPL
ZNF335
SRI
MOB3A
IZUMO4
MARCHF8
ZNF396
ACAT2
DAZAP2
HTR5A
ADPRS
CDC73
TSPAN10
NPLOC4
SPECC1
MDM4
SF3A1
CCDC157
TRMU
RBM34
SELENOW
TIGD5
EEF1D
LUC7L2
FMC1-LUC7L2
FMC1
INTS2
DHRS13
CRNKL1
CFAP61
FBXW8
MRPS5
ACTR8
RPAP3
STARD3
STX7
PEPD
ARL4A
CHMP3
LOC112694756
HOOK1
RAB18
PGBD2
KLHL12
RPL31
NCSTN
COPA
ANKRD13A
THNSL1
SRP68
RIF1
CCDC107
CCDC15
PPIP5K2
GIN1
TRUB2
COQ4
CBWD5
ZNF3
CBWD3
CBWD6
NUP133
THUMPD1
KAT7
S100A13
CMTR2
EXO1
DENND6A
CHTOP
VANGL2
ZNF593
C1orf232
CCAR2
GSPT1
CSTF2T
HDAC1
ANKRD36C
RPAP2
GLMN
XPA
OPA1
NMNAT1
LZIC
RPS3A
ZNF461
RPS6
ZBTB17
ABCF2
HINT3
CHEK1
ARHGEF12
USP35
KCTD21
SLMAP
IFNGR1
VPS36
REX1BD
XPNPEP3
ST13
ANO5
MRPS18C
HELQ
STAM2
AP5S1
NCAM1
MTBP
MRPL13
HNRNPD
MRPS14
GNB2
NDFIP2
EIF4A3
RAB39B
RPS14
KDM3A
CREM
DCT
RBSN
ZKSCAN2
PGS1
HIPK1
MYL12B
RNF138
YWHAE
HYAL2
TMEM230
RBM17
PRPF40A
ARL6IP6
LRRFIP2
MYH7B
GSS
LATS1
BDP1
GTPBP4
PTTG1IP
CPLX2
TOX4
RAB2B
MAP3K2
TCP11L1
STK38L
MRPL58
RWDD3
GPATCH3
DUS3L
ESYT2
TSG101
XRCC2
TPK1
RPS12
MTMR9
SLC2A12
HNRNPH1
C7orf25
EIF3G
LAMP1
ANGEL2
TXNDC17
KIAA0753
MRTO4
EMC1
WASF1
VPS16
PCED1A
NET1
NCOA5
CDC40
C1GALT1C1
SLC25A5
ROR1
CENPBD1
TTC13
NOTCH2NLA
MRPL38
TSSC4
DNAJC2
STK25
ZSWIM7
TTC19
NAGPA
GLUL
CPEB4
TRIM16
BCAR3
THAP10
LRRC49
VPS33A
RAMAC
GOPC
ZFP30
FAM227B
DTWD1
RTTN
EIF2S2
HSPA9
ASH1L
FUS
C12orf66
MIA2
RARS1
ZNF180
NPRL2
CYB561D2
DNAH14
TTLL7
TBC1D4
RGS9
GPR108
NDUFB1
CPSF2
FAM228B
SF3B6
NOTCH2NLB
GOT2
ZNF398
ZNF425
SNRNP70
ABRAXAS1
EIF3B
TTI1
RPRD1B
DUS1L
TMEM167B
STAMBPL1
CACTIN
MECR
NDUFA10
CATSPERE
ZBTB37
MTHFS
ZCCHC9
UBE3C
CASZ1
PSMD3
RBM45
GARS1
EXOC2
AP1G1
AKAP1
SMC3
HMGCL
MAPK8
RABGAP1L
CCDC124
TMEM106B
YIPF2
TIMM29
VPS45
MGAT1
TUBD1
RPS6KB1
ZNF627
RNF32
CLUAP1
HBS1L
EIF5B
CAPS2
TIMM23
TXNDC9
DHDDS
FAM120B
FUCA2
TANGO6
PUM1
MEMO1
TMBIM6
CYCS
C6orf226
ALG9
RIOK1
CAGE1
DIMT1
ZNF564
DKK1
RTL8C
MRPL1
ANKRD36
SRSF11
LRRC40
ZNF555
ZNF429
GPHN
MRPL37
CYB5RL
SLC35B1
IFRD2
GBE1
HOMER1
TAF1B
DPP9
MAGOH
BORCS7
ADPGK
TMBIM4
MAP3K3
ZNF473
VRK3
THBS4
MTX3
SLC37A3
SPC24
WWOX
CSDE1
CNPY3
QTRT2
CCDC191
ZMYM1
CASTOR2
ZNF70
TMEM128
PIGK
DGAT2
C2orf49
TTC37
ARSK
IQCH
AAGAB
TTC5
CBWD1
TIAL1
GTF3C6
SIRT1
TMEM131
PRKAR1A
BRMS1L
IL10RA
SRRM3
PCBP2
GDAP1
PTCD1
CPSF4
TSN
KMT5B
CDC25C
MED11
FAM53C
LOC100287896
LIPT2
DTD1
BCL2L1
DCLRE1B
AP4B1
UBIAD1
SH3GL1
SLC35D1
PCCB
BRIX1
UBE2Q1
AIFM1
FBXO31
SAAL1
ATL3
ABCB8
P4HA1
AKR1B1
LINS1
ASB7
EGLN1
C1orf194
LMBR1
BAZ1B
RBM14-RBM4
RBM14
WDR26
SHPK
CTNS
PTPN4
NSUN4
ZSCAN32
ZNF174
NACA
TARBP2
SPAG16
PKNOX1
INAVA
PPP1R8
POLR2C
EVI5
RXYLT1
TTC23L
BICD2
CCDC66
IPO9
PRKN
PACRG
ZNF248
ZNF624
BAX
TBC1D32
LYST
PLD6
GSTA4
DAB1
MARCHF7
RAB5IF
OMA1
ADGRL1
ZBTB11
ZFPL1
CDCA5
ZCWPW1
MEPCE
SH3BGR
LCA5L
AASDH
RINT1
NVL
NOL8
CENPP
SMARCD1
MFAP3
FAM114A2
NUDT7
SEC14L1
INVS
ERP44
MEF2A
ZNF18
SLC35C2
CLCN7
SAMD4B
MLEC
KMT2D
ANKRD46
TOMM20
DPH7
TAF5
STARD4
TSEN54
CASKIN2
RUSF1
SUPV3L1