ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799525 | CD4+ T cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◣ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

GBA
CAMK1D
DUSP6
GDPGP1
CIB1
ANXA2
PAXBP1
ITGA4
PUM1
SFT2D3
ITGAL
SPATA13
STX6
THAP11
YPEL3
FAIM
SF3A3
TBL3
FRG1
ZNF571
ZNF540
SSBP1
TTLL12
NUF2
DDX18
PSTPIP1
ZNF827
ZNF226
RUNX2
SKP2
LMBRD2
VTA1
NMBR
DMAP1
MRPL44
ZBTB20
NDUFS7
GMPS
GLS
TNRC6B
EXO5
DCP1A
TFPT
PRPF31
PPIP5K2
GIN1
HMGB1
USPL1
SCNM1
LYSMD1
HNRNPD
NME1-NME2
NME1
NAP1L3
FAM133A
ARHGAP15
TDP2
ACOT13
STX16
AP2B1
COX16
CLUAP1
ALG10B
GTF2H2C_2
GTF2H2
ADPRS
GTF2H2C
NSUN6
FAM227B
DTWD1
CHMP5
BAG1
MED18
SLC29A2
NTRK1
SH2D2A
IPO4
ORC4
MBD5
RPL37
POLR3B
PCYOX1
DCAF10
GTPBP10
BRWD3
NDST2
MED23
ARHGAP9
MARS1
RPS7
KMT2A
KCNJ15
SETD1A
FRA10AC1
SEC23B
NAT10
GATM
SPATA5L1
LY9
RRN3
RAB18
CCNT1
PHB2
TRAM1
MTF2
SNRPB
FLI1
INTS12
GSTCD
NLRP1
P3H4
RPL27
TOR1AIP1
ADORA2A
NDUFB3
FAM126B
CCDC59
TES
PWP1
ERCC5
EIF3E
ATP5MPL
ARID1B
LIPA
NUP133
CTNNB1
NDUFAF1
CNIH1
FGFBP3
HTT
PEX3
ADAT2
RAB5C
C16orf54
DNAJC25-GNG10
DNAJC25
PRRG2
NOSIP
TATDN3
NSL1
GABPA
ATP5PF
WWOX
RBBP5
EIF2D
CBR4
GOSR1
ING2
GTF2H3
EIF2B1
MDGA1
TMED2
SCAND1
SNX17
EIF2B4
PSRC1
SNX16
NSA2
GFM2
TSGA10
C2orf15
ZC3H13
PGBD4
EMC7
SCP2
PGK1
LSM8
ZC3H15
EPS8
TPR
ODR4
BCL9
SAMD4B
NOTCH2NLB
SIRT6
ANKRD24
VPS29
RAD9B
SURF6
WDR36
UBE2O
AANAT
TPP2
GPAM
NPAS4
ABLIM1
TUT1
ALG10
PRRC2B
PTK2
STX18
STOML2
ANXA2R
RPL26L1
USP45
SF3B1
CCAR2
ING4
MRPS23
ZZZ3
POLR3A
ZNF555
RPL29
SNX5
MGME1
PRKCE
ARL6IP5
NOTCH2NLC
WDFY1
TRMT6
MCM8
GALK2
COPS2
ZNF829
ZNF568
DDX46
ZC3H12D
MTMR9
SMG6
ZNF408
ARHGAP1
WDR55
TTC32
SELPLG
RMDN1
GAA
CYP20A1
IL2RB
STARD6
C18orf54
CBWD5
CBWD3
CBWD6
SLC33A1
MRPS16
MRPL53
POLG2
MFSD8
ABHD18
SDHAF3
MED4
ATG5
TMEM222
SS18L2
VPS11
MRPS31
PPP4R3B
KLHL20
SNRPD1
UBE4A
NOTCH2
SPRYD4
GNAI3
SNAP47
JMJD4
RSL24D1
RPS16
PPP6C
RALBP1
ZNF44
RAB5A
EFHB
RPL22
TLR6
MITD1
MFF
MRPS18C
HELQ
EXOSC9
FBXW7
MRPL21
IGHMBP2
BUD13
CBWD2
ZNF846
EIF3F
C1orf74
TMEM87A
GANC
RANBP3
INO80B
BTRC
EXOC5
AP5M1
LCP1
NUP214
RRM1
TMEM230
TAF12
RPS15
PSMF1
THOC3
PPME1
C2CD3
NOC4L
DDX51
ATR
CHMP1B
RABGAP1L
KCTD5
TRNAU1AP
XPC
LSM3
ARHGAP45
FAM228B
SF3B6
ZFPL1
CDCA5
PRKAG1
TADA1
RGL2
MFAP1
ARAP1
FITM2
CAMK2D
CCT8
RAD54L2
HAX1
LNPEP
ELP3
EIF1AD
BANF1
MAP1LC3B2
PUM3
NDUFA12
ZMPSTE24
TCTE3
ERMARD
TESPA1
CDK11A
MLEC
RPS20
SECISBP2L
ARID1A
AOPEP
WIPF1
C10orf88
TMEM68
TGS1
EXOSC6
CEP85L
RPS12
USP4
PRPF18
KRTAP16-1
TMEM116
ERP29
ACOX3
TRMT44
DPYD
ZC3H3
RFX7
NDUFAB1
MTIF3
FYN
SLC25A51
BIRC3
ARF6
TMEM242
SUGT1
CD2BP2
NOTCH2NLA
VWA8
HILPDA
TBC1D19
PSMD3
MGAT1
TRIP4
ZNF3
WASHC2C
ZNF501
NSUN4
BRIX1
THUMPD3
PSD4
MRPL10
LRRC46
FAM207A
NUP107
NDUFB6
RESF1
API5
ACTR6
CDK5RAP1
TTI2
THNSL2
KIAA1191
UTP23
OCIAD1
CANT1
FKBP1A
UBE2F
IL16
PKN2
RPS29
PA2G4
NR2C1
WDR4
SAP30
SLC44A1
ATXN7L3B
ZNF562
ADPGK
EGR2
ADH5
PHF21A
MAD1L1
MTPN
LUZP6
ZNF567
SEC31A
RPS13
BACH2
ABCD2
ARHGEF6
PAFAH2
DFFB
CEP104
PHKB
ITFG1
STRADA
ITPRIP
UTP25
UFL1
RMND1
ARMT1
SEC22B
NFAT5
HNRNPA1L2
FADD
LAX1
PSMD6
GPR171
PTPN4
WDR70
SLC7A6OS
PRMT7
CRADD
UNC50
COA5
OXA1L
RGS1
UBL7
SGO1
RGS14
COPS4
MRPL19
EVI2A
HBS1L
GRWD1
RER1
MORN1
ALDH16A1
PBXIP1
WDR43
BRF2
RANBP2
ATP1B3
NOB1
PTPN22
MRPL52
NOXA1
NDUFS2
CAP1
YBEY
MCM3AP
GON4L
DOK2
METTL18
C1orf112
SPDL1
CHERP
RETSAT
BCDIN3D
ARHGDIB
ITPKB
TSEN15
TMEM186
PMM2
EPRS1
PSMB7
ZNF805
CASP8
SMIM26
INTS4
ZNF821
CWC25
SKIV2L
NELFE
ARPC2
TRMT61B
ADAR
RCC1
C17orf75
ACTR3
GGNBP2
HIF1AN
UBA52
POLR2J3
ICAM2
GZF1
EIF1B
PSMG1
XRCC2
SPTLC1
EIF2B2
DRG2
DHX16
GSPT1
AGGF1
SLC38A2
RIC8A
BET1L
VIRMA
U2SURP
INO80D
ASXL2
SNRPC
MED31
C17orf100
RSPH14
RUVBL1
PPP1R11
C18orf25
TIMM23
ZNF668
ZNF646
ZNF302
BBS2
LSM5
DPP8
RPL38
AP3B1
PIK3R4
CCDC86
ZNF318
RTF2
LRRC37A3
PPIH
NARS1
ZNF286A
MTRES1
UBR4
LSG1
SLTM
TSFM
ZCCHC8
ZNF91
POLR1F
MRPS35
DAXX
SNUPN
NDUFS1
EEF1B2
RAB37
AQR
C3AR1
POLR2H
PARP8
POLE4
SLC30A6
PDE8A
SLA
HUS1
CABIN1
ANAPC10
ABCE1
PEX12
ITCH
TMEM41A
USP30
NR1H2
CPPED1
CCAR1
DDX19A
ATAD1
ZNF605
EIF2B3
SRP19
RGL4
RWDD1
COX6A1
POLR2K
NDUFB5
MRPL47
URM1
TERF2
RTCA
ETFBKMT
DHPS
POMP
TM2D3
BPNT1
SMARCC1
DSN1
ZFYVE16
MOB4
ATAD5
RAPGEF6
PPP1R16B
NSFL1C
METTL3
ATXN1L
GTF2B
EIF3D
ZNF879
ZBTB43
CBX1
SNX19
TNFAIP8L1
RAP2C
TMEM248
RAD23A
PDCD2
BRAP
ACAD10
NUTM1
NOP10
INTS1
PIK3C3
TTLL5
ERG28
CHIC2
RALGAPB
RSRP1
RAD52
SMG8
ATP5MC3
TMEM30A
MTERF1
TTC5
AP3S2
CRBN
DSE
DOCK8
TSPYL1
CMTR1
FAF2
ATG4C
EID2B
YIPF5
KCTD16
TRUB2
COQ4
ZCCHC4
SNRPB2
CUL5
VPS72
MMADHC
SLC26A11
SGSH
LINS1
ASB7
CWF19L2
GORASP2
PIGF
CRIPT
TMTC3
CEP290
PRKRIP1
FAM133B
TIMM9
KIAA0586
THAP12
GVQW3
CSNK1A1
RBM7
C11orf71
ZNF773
TMX3
CCDC102B
TM9SF2
OGFOD1
NUDT21
XRRA1
SPCS2
COX7C
PIGM
POLR2C
BFAR
MRPL20
YPEL1
NDUFC1
NAA15
GNPAT
C1orf131
FCHO1
TGFBR2
SYPL1
C15orf40
PPIL4
SEH1L
CIPC
KIFAP3
RPS3A
CD55
TRIM46
KRTCAP2
TMEM101
SIRT4
WDR24
ZNF510
TFAM
PRKAB1
TRIP11
TIMMDC1
GIMAP1-GIMAP5
GIMAP1
BTD
CASC3
TMEM208
LRRC29
KDM8
SNU13
HACL1
TOMM5
PRPF19
C1orf109
SELENOH
TRMT2A
RANBP1
EIF2S1
ATP6V1D
USO1
PSMC1
OTUD3
RNF139
NAPG
ELOF1
DPP9
YTHDF2
ITM2C
EDEM2
MZF1
TMEM167B
CHPF2
PPP1R35
ZBTB40
TTC1
ERGIC3
TPK1
NDFIP1
TBC1D15
TOP3B
MRPL16
SRSF10
DUS2
DDX28
FAM98A
HNRNPUL1
SMG9
UTP15
ANKRA2
BNIP1
NAA20
TMCO1
GNE
MFSD4B
ZNF638
STRN
ASNSD1
ASDURF
NRF1
SNAPC5
ULK4
XPOT
INTS5
PTPRCAP
FAF1
BLOC1S5
ATG16L1
CNOT6L
SRSF9
DYNLL1
ZNF248
TMC8
SRSF11
SERP1
EIF2A
RGL1
ARPC5
DCAF1
HSPE1-MOB4
HSPE1
HSPD1
KRR1
SNX18
UQCC1
PTPN23
COPS7B
DNAJC24
DCDC1
SP4
DDX23
IPO11
THAP5
DNAJB9
TKFC
DDB1
TUBA1B
RCBTB2
C16orf91
NMNAT1
LZIC
ZMYND11
SEC22C
NKTR
NDUFS3
KBTBD4
PDXDC1
SLMAP
VCPKMT
RTCB
DPY19L4
IMPA2
CENPN
ABT1
ZNF189
MRPL50
TSN
PNISR
EIF2B5
FEM1C
RB1CC1
NAGK
EXOSC4
MRPL45
IARS1
SNAPC3
PREPL
CAMKMT
DUSP7
MAD2L1BP
MICOS13
HSD11B1L
SRRD
HPS4
CAT
SAR1B
GFM1
PPM1A
SLC3A2
CSK
ZNF561
TPM1
DCLRE1B
AP4B1
WDR7
SAFB2
SAFB
PSMA6
ITGB3BP
EFCAB7
NDUFAF5
ESF1
RPIA
SSNA1
ANAPC2
MAP3K7
CDK5RAP2
INPP5K
RACGAP1
CKS2
NDUFB4
LSP1
UCHL5
RO60
CDKN2AIPNL
QSOX1
PRKACB
ZNF266
ICE2
ATF7IP
HES3
KANSL1
LOC100289561
ILF3
SIPA1L1
DUS1L
MAGOH
YARS1
S100PBP
SLC35A4
APBB3
TUT7
NFX1
KDM1A
SNRPE
INTS2
LANCL2
TUBGCP3
ACTR2
LRRC40
UGGT1
MICU2
SBNO1
PAK1IP1
C6orf52
CLUH
CCNC
OPA1
ANKRD40
DPH7
ZNF585B
RNF14
SAMSN1
BRMS1
MRPL1
STAT1
TAF3
PCNP
FBXO38
YME1L1
CHCHD5
MRFAP1L1
ACBD6
GCLM
MAGOHB
MRPL36
SDR39U1
OXNAD1
DPH3
C11orf49
TAB1
KRAS
EMC4
PRPF38A
ORC1
LMF1
SOX8
SMG5
PPP1R8
TIGD1
EIF4E2
LATS1
CBWD1
ZNF589
CNOT10
QTRT2
CCDC191
USP1
C6orf89
NUP42
TNFSF8
CDK19
AMD1
ZNF770
SMN2
SMN1
PINX1
ATG7
EXOC2
MDM4
ZBTB17
MED14
ZEB1
RPS6
PNKP
ZNF230
PSMD11
SDAD1
IFRD2
STRIP1
MAPKAPK5
SERPINI1
PDCD10
NCAPG
EIF4B
CCM2
NOLC1
MED27
USP19
GATAD2B
ZNF207
EIF4E
CRB1
H4C3
THOC1
KLF5
MIS18A
IVNS1ABP
C2orf74
AURKAIP1
ARL8B
EEF1AKNMT
ZNF384
ANGEL2
ZNF576
IRGQ
RPL3
APOBR
C18orf21
TBRG4
KIF15
KIAA1143
MAK16
TBC1D10C
LAIR1
ATP5MC2
MTMR6