ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457586 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◣ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BSDC1
RABGAP1
PPIG
LUC7L2
FMC1-LUC7L2
FMC1
ST6GAL1
TMEM191C
SNIP1
CCDC130
DNAJC14
SAE1
CEP164
PRELID3B
SAMD4B
ZNF623
PRAME
ZFP30
ATP1A1
KCNJ15
MAPK1
ANKRD54
TRUB2
COQ4
SNRPE
ADAR
BAIAP2
RPL26L1
RAC1
MRPL36
HLA-E
PAXBP1
RPS29
STAU1
NUP214
NUP155
ARHGAP39
KLHL20
YWHAQ
TMEM41A
PPIL2
WDR43
PIGW
MYO19
PAXX
ZBTB6
CEP85
RPAP1
ZNF789
GRPEL2
NDUFS7
YTHDC2
GBA
ZZEF1
CYB5D2
SMU1
ITGB3BP
EFCAB7
TMBIM1
CYP17A1
GP1BB
CFAP36
FAM13A
MIIP
CLK4
FABP6
MAPRE2
UTP3
SEC61A2
ALDH9A1
GPR3
GNL3L
BRD7
LOC102724265
ZCCHC24
YPEL3
TOR1A
NME1-NME2
NME1
RCCD1
DMAP1
ATG101
ZBTB40
PRPF3
ZNF391
PKMYT1
SPAG4
IFT140
CRAMP1
RAB11FIP1
CBX1
C9orf16
CLPTM1
NDUFA6
MED15
TENT5B
WARS2
SORD
GTF2H4
CRKL
TIMM17A
SPACA6
CASS4
PDE11A
RBBP5
FZD9
SELENOH
RPS14
ATP23
STX16
LZTR1
DDA1
SLC25A16
RFX2
UBE2L3
MTIF2
CLTCL1
PARP2
POLR2J3
RBBP9
RAB5C
TTC32
TAF10
DCLRE1B
AP4B1
JRKL
CCDC82
RERE
DNAJB12
ARFGEF2
MARCHF2
N4BP2L2
CDK19
FEM1C
SSBP1
POLE4
GABPB2
RTL10
GNB1L
NDUFA2
IK
PYCR1
AURKAIP1
TRAPPC9
ZMPSTE24
ZNF562
SMIM13
DDX27
MKNK1
SMG8
ABHD3
GAL3ST4
P2RX6
ZNF487
RCC1L
GNB2
CYB5R1
LRP6
PRIM2
NDUFB3
FAM126B
CHEK1
TMCC3
PDAP1
BUD31
TRIM52
C8orf37
SET
SMN2
SMN1
CNOT6
PPP6R3
NUF2
WDR74
PAK1IP1
C6orf52
LRG1
PPP6R1
DHTKD1
TYW1B
BICD2
CCDC12
CCZ1B
UFSP2
METTL1
EEF1AKMT3
MAP11
ZNF408
ARHGAP1
PPIH
SLC25A53
CCNI
NDUFS3
KBTBD4
TM9SF4
KCTD9
CDCA2
FUT1
RPS19
TMEM242
UFD1
CDC45
OBSL1
INHA
SUPT7L
SLC4A1AP
NR2C2AP
FAAH
ATAD3A
MAP1LC3C
POLG
MOB1B
DQX1
DHPS
CCSER2
MTOR
MED24
CCDC59
CCAR2
ARPC2
HK1
CCDC116
HARS2
HARS1
POLR3B
CFLAR
CMIP
FAM86B1
TRAM2
ZNF138
SDF2L1
INO80C
BTD
GCLM
HACL1
NUDT7
TUT1
PCTP
AJUBA
DYNC2I2
ENDOV
PIH1D2
NKAPD1
MEMO1
PRRC1
HERC1
SLC38A1
HOOK2
PROCA1
ZBTB22
RPS15
CALM2
KAT5
GOSR2
ACTL8
RBL1
SRCAP
LOC730183
COG7
DDX21
HDAC1
FOXP4
POLR3F
DZANK1
WASF2
MGST3
TRMT11
DIDO1
GID8
YME1L1
NIPA2
RPS8
SDHB
TOP3B
NR1H3
ACP2
MAD1L1
SOD1
RPN1
NICN1
OR8B8
RPL27
MAGOH
DPH7
SUB1
SMAP2
CBR1
UBE3B
RRP1
ACOX3
TRMT44
SLC27A4
NRBF2
INTS7
DTL
HNRNPA0
SMYD5
DGCR8
KCNH2
WFDC3
DNTTIP1
ADRM1
KHDC4
ACTL10
SLC25A1
TTC26
NARS1
PSMB6
AGGF1
CSTF2T
TCTEX1D4
BTBD19
FAM220A
WDR55
MRPL48
MRPL27
EME1
CLBA1
ZNF346
ATP13A1
OR8G2P
NHLRC4
QRICH1
HNRNPH1
DHX40
PFDN5
RTTN
RPL5
UBOX5
FASTKD5
TRIM5
AGBL3
COQ3
CCDC120
NOS3
PAFAH2
INTS2
NOL8
CENPP
LARP1
NECAP2
AIFM1
BAG6
C19orf25
MED23
EIF3F
ZBTB45
ZNF670
SARAF
TP53BP1
ZCCHC10
TPK1
TNFAIP8L1
PGAP2
AHCYL2
THAP7
RBM8A
TSACC
CCT3
DENR
MBLAC1
EPHB4
RBM28
SNRNP35
NDEL1
RNF187
ZSCAN25
TPR
ODR4
SMG7
CHCHD2
HOXC5
GTPBP3
ULBP1
ZNF280A
TRIP4
ATP5MC2
TIPARP
CDIPT
HMGN4
FAM168A
FAM160B2
RMND1
ARMT1
TBX1
RBIS
WASHC2C
DHDDS
TTC4
ZNF33A
RIOK1
CAGE1
VWA7
ERCC1
IQSEC1
FOXK2
GDF11
AASDH
TMED2
WDR76
ZNF627
COPS4
RBSN
PDE12
TMEM248
IREB2
PCYT1A
GAPVD1
PIAS3
DUS3L
EIF4ENIF1
GSTA4
WDR36
ZNF165
PLK3
PSMC4
KXD1
TMEM259
GPN3
FAM216A
TENT2
ARNT
SCN9A
PPP1R12C
ZC3HC1
ZNF335
RGL2
ADARB1
ZNF74
VARS1
TLE2
DDX39B
NDUFA10
PTK2B
TRIM35
ZDHHC7
GFI1B
TSC1
RPA2
UFC1
TOMM5
TOMM40
PPM1F
TARDBP
OGG1
VILL
TFPT
PRPF31
FAM234A
MRPL42
UTP6
C22orf39
HDAC5
ALKBH7
DCAF10
KEAP1
TMEM101
TMEM128
ELP1
ABITRAM
DTX4
HES4
MRPL44
MRPL40
HIRA
CFAP298-TCP10L
CFAP298
PPP2R5B
STAT6
APRT
SIKE1
ZNF436
PITHD1
COA7
NEK4
CYREN
USP45
ADGRL1
NUDT13
SLC25A6
ANXA2
ANTXR2
ARRB2
NUDT9
ZCWPW1
MEPCE
PIK3R3
RWDD2B
LOC730098
ZNF561
CLPB
CCDC124
ALDH3B1
USF1
PRKAR1A
DIS3L
SCAP
STK40
C1orf74
GM2A
SYT12
TRIM16L
FBXL13
ARMC10
AQP10
IGF2BP3
TRADD
FBXL8
HTR5A
HUS1
MAN2A1
PPP1R8
CDK4
EML3
PEX14
OCEL1
ACTR3C
VPS39
PRMT3
COMMD1
CCT4
SAR1A
NAF1
TTI2
MTBP
MRPL13
SUGCT
MPLKIP
MED18
SIRT4
KDM5C
MARCHF7
CAMK2G
MTMR14
UBE2I
C17orf58
NOP16
HIGD2A
PSMA1
CGGBP1
C3orf38
LIN54
RIOK2
ZDHHC12
POM121
SIGLECL1
TSFM
GPR137
TTC31
CCDC142
EIF3C
SLC39A8
EIF3CL
ADPRHL1
ZNF649
MADD
PATL1
GP6
MTF2
MEGF8
PRRC2B
SF3B5
SKIV2L
NELFE
PEAK1
HMG20A
DNAJA3
MCTS1
SLC2A12
PRTN3
PPIP5K2
GIN1
SLC29A2
CCDC97
TNFSF9
SLC13A3
DCAF4L2
HEXIM1
RSPH3
CENPN
NFX1
BTN2A2
FAM133B
ATXN7L2
SECISBP2L
CSDE1
DYNC1I2
CSRNP1
LSM8
MAD2L1
PSMD4
VTA1
NMBR
MUC1
CITED2
OTUD3
WRN
MMUT
CENPQ
PURG
PRPF40A
ARL6IP6
ECE1
BAAT
SKP2
LMBRD2
SLC25A51
NBEAL2
SPRING1
RNFT2
CRCP
MVK
FKBPL
RAB18
AARS2
ZBTB17
EXOG
SEM1
PYCR3
NPRL3
ATF5
SF3A3
SENP1
PFKM
AQR
AUNIP
TMEM87A
GANC
VKORC1
MOB3A
IZUMO4
RAB11B
LMAN2
EMC4
TOMM6
TTC30B
CCS
CCDC87
RNPEP
SLC35C2
CCDC28A
TOR4A
FAM167B
ZNF426
SLC24A1
INTS14
MRPL19
CYB561D1
SCYL3
RBM48
PEX1
CEP76
RBMXL1
KYAT3
PSMG2
TBCE
TOR1B
SNX29
INTS12
GSTCD
CDK5RAP1
FAM228B
SF3B6
CYB561A3
TMEM138
PLD3
C19orf47
DMAC2
ARF6
SNRNP48
PXMP4
LOC389831
LOC114841035
FKBP2
DRG2
SLC33A1
RINT1
CCNT1
MIA3
WDR62
THAP8
OXSR1
GTF2H5
ZNF440
C1QL4
RPL41
ZNF311
B4GALT7
TRMT2A
RANBP1
SFSWAP
ETFDH
C4orf46
ZFP14
HBP1
MED16
ING5
HDAC6
ZNF18
HFE
JMJD1C
REEP3
CHMP7
HAUS4
PCBD2
STAM2
FKBP8
SRSF7
BTN3A2
ZSCAN5A
TXNDC11
GPSM2
BMS1
MRPS15
C12orf73
CDC5L
EGR2
PRKCI
NEU1
UQCRQ
GDF9
STIL
KRT18
BAHCC1
SH2B1
CCDC174
BOLA2
ZNF354A
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
ACSL1
ARL2
KHSRP
SH2D3A
KRTAP2-4
CATSPERZ
NSUN4
ATP5MC3
MRPL45
DBF4B
MMADHC
NUTM1
NOP10
SAMD13
FANCD2
DLAT
TMEM50B
RPL36
PRMT1
COX16
AP3S2
NDUFAF1
TNPO3
PRKCSH
CCDC151
TNFAIP8
DUSP10
UTP25
UTP11
NDUFB2
NDUFS5
ZNF574
RABEP2
KRTCAP3
MOSPD3
BCAR3
SMG5
SEC22B
CNPPD1
ABCB10
RETREG2
CDK11B
DMPK
ZNF830
CCT6B
STX4
SPOCD1
PTMS
RAB8A
GPR85
REXO4
VAPB
ZNHIT6
AAAS
MRPL24
UBR2
TPRKB
ZNF764
FBXL19
UBE4A
SMIM14
ZNF226
RRN3
SOD2
WTAP
KLHDC10
BRAP
ACAD10
SNRPC
WDR83OS
WDR83
ZNF497
PIK3R2
GORAB
ATP5MC1
EIF1AD
BANF1
BRIX1
CD2BP2
NUP205
CCDC43
NKIRAS1
MFN1
CUL7
OR2L13
ARL5A
RPL15
OSCAR
NDUFA3
SLC25A35
MKRN3
PPP5C
ELOC
RPL32
SNRNP25
POLR3K
LBR
NRSN2
LSG1
COX7A2
ZNF510
MVB12A
IFTAP
FKBP7
COMMD9
RPS15A
ASAH2B
PSMC5
FTSJ3
MICA
TCTEX1D2
ZNF414
TUBA1C
TTC16
PTRH1
CDKL3
UBE2B
TTC39A
YIF1A
USP6NL
CCDC9
TMC6
ZNF691
ZNF513
RRP36
TBL1X
ZW10
CDK11A
ATP6V0E2
CDC25C
FAM53C
HOMER1
PPID
LMNB2
ZYG11B
LOC388282
DDAH2
CLDN7
RBM45
YTHDF2
ING3
PNPO
SNU13
ENDOG
BRCA1
SYVN1
KIAA2013
STXBP3
PCYOX1
RPLP0
SPAG9
ZNF687
AP1M1
MRPL33
PPP1R11
CFAP20
JOSD2
CWC25
NCAM2
DNPH1
ZNF34
TUBAL3
SCNM1
LYSMD1
MLEC
KCTD5
CSTF1
AURKA
H4C3
ATP5MF-PTCD1
ATP5MF
ARIH1
DAGLB
ERBB3
CSTB
ISOC2
GTF2H2C_2
GTF2H2C
COA6
MRPS14
PUS10
PEX13
ZNF180
ZNF808
GPATCH2L
TRIM44
MANBAL
RPS11
MRPS33
RIF1
SPNS1
VANGL1
METTL3
IL11RA
MYLIP
RAD23A
CEP85L
THOC3
TCAF2
PPOX
C21orf58
POC5
CHD1
GADD45GIP1
GSDMD
GABARAPL2
MCRS1
RUVBL1
NBPF1
ATG5
TMEM59
PRR14
KYAT1
SEC24C
TAP1
PSMB9
ZNF12
AGO4
BANP
SRP9
RCOR3
SLC35E2A
ANAPC10
ABCE1
RPN2
TIMELESS
SUPT6H
SDF2
TRIP6
DSTYK
VIRMA
DDX41
PSMD9
HPD
SLC35A4
APBB3
CENPF
SUZ12
HMGCR
BUB1B
EDC3
RNF181
GTF2B
RHBDD3
EWSR1
SYCP2L
ZNF628
IL1RL1
ERFL
ASB15
IPO4
GALK2
KRR1
NMNAT1
LZIC
RPS13
TMEM183A
ANXA11
CNPY2
ZNF747
NPFFR2
MRPS18C
HELQ
PPIL1
ZNF613
CNTROB
RPL22L1
DOCK8