ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2545066 | LNCAP
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◣ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MTRNR2L8
KCNJ15
YPEL3
BSDC1
DUSP6
ITGB3BP
EFCAB7
ZNF562
GBA
PDE11A
RABGAP1
FEM1C
CBX1
NUF2
RBBP5
RPS7
MTF2
SSBP1
PAXBP1
DMAP1
AURKAIP1
SAMD4B
LUC7L2
FMC1-LUC7L2
SF3A3
PUM1
STX16
ARHGAP39
FAAH
NDUFS7
MED23
BAAT
CEP85
NME1-NME2
NME1
COX16
CCDC130
PEX3
ADAT2
YWHAQ
ZNF117
RPS29
TMEM41A
ZNF623
TTLL12
TMEM242
ACYP2
DCP1A
EIF2D
RPL27
INTS12
GSTCD
RAB37
FMC1
CEP72
PPIG
JMJD1C
ZMPSTE24
NDUFB3
FAM126B
FRA10AC1
RABGAP1L
MRPL44
GDPGP1
CIB1
POLE4
DCAF10
NOS3
DSTYK
NPAS4
HMGB1
KMT2A
TBC1D19
MAPRE2
ACOX3
SELENOH
USPL1
GTF2H2C_2
ZFP30
SKP2
LMBRD2
ZNF426
TRIP4
GTF2H2
SLC24A1
INTS14
TTC32
TRMT44
STX18
GTF2H2C
TMEM70
POLR2J3
RPL37
TOP3B
DPY19L4
FAM227B
DTWD1
DRG2
DNAJC25-GNG10
DNAJC25
PRELID3B
PAFAH2
COMMD2
SLC33A1
ATP1A1
ZNF561
POLR3B
TOR1AIP1
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
MRPS31
YTHDC2
UTP3
PPIP5K2
GIN1
CCDC59
RBBP9
CLK4
CAT
ALG10B
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
SMARCD2
GTF3C3
REEP3
RPS14
EIF3F
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GSTA4
GTF2H4
ANKRD54
LSG1
EPS8
INTS5
BCAR3
NSFL1C
MRPL40
HIRA
RTTN
AP3S2
SMG8
STAT3
REXO4
BMS1
CDK5RAP1
HTR5A
ITGA4
TEFM
SNIP1
PPP6R1
CAMK1D
KDM3A
INO80C
RNF187
EIF1AD
BANF1
SNAP47
TACO1
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
SCAND1
COPS7B
MRPL21
IGHMBP2
DRAP1
C11orf68
JMJD4
C3orf14
WDR74
PSMF1
KANSL3
ILF2
ATP5MC2
USP30
SNX17
EIF2B4
FAM207A
TTC26
TATDN3
NSL1
TRUB2
COQ4
TMEM222
RILP
NEMF
WDR11
SAR1B
WDR36
SLC29A2
DUS1L
ZBTB45
FAM133B
FGFBP3
ATR
ZNF571
ZNF540
NBN
ZNF391
TSEN15
AKAP10
MTIF2
GALK2
MOB4
MRPL1
CCDC97
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
POLR3E
DPP9
GABPB2
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
HSPE1-MOB4
HSPE1
HSPD1
KDM1A
TTI2
TMEM68
TGS1
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
BNIP1
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
SNRPB
NDUFAF1
ZSCAN25
CPPED1
RAB30
BTD
SEC13
STAU1
MRPS23
NCOA7
MNAT1
POLG
NUP54
MAN2C1
C8orf37
TTC4
TPR
ODR4
NR1H3
ACP2
ZCCHC4
RMND1
ARMT1
TMEM101
CCNI
GTF3C5
NDUFS3
KBTBD4
RPS20
ADPRS
MITD1
THAP11
MTBP
MRPL13
CHD1L
B4GALT7
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
NOP16
HIGD2A
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
BRF2
FAM228B
MED18
SNRPD1
CCAR2
ZNF609
TIPARP
DCLRE1B
AP4B1
TSFM
ING2
SDHAF3
NAA20
PARP2
METTL9
ALKBH3
SLC35A3
LOC102724265
SF3B6
SERPINB1
PIGW
MYO19
SLC39A13
HNRNPD
ADRM1
DEFB124
PHIP
CASC3
ZSCAN31
COPS2
HUS1
EIF3E
TPK1
PSMD3
SESN1
CRKL
NCBP3
NECAP2
SMU1
OPA1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
MRPL3
SNRPB2
RAB18
MLEC
TGFBR2
LRP6
ALG10
EXO5
PLEKHM3
N4BP2L2
RPL26L1
CLUAP1
FAM98B
GORASP2
ZNF280D
AGK
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
INO80B
SACM1L
ZNF605
R3HCC1
CCDC88A
RBM45
ZSCAN30
PIP4P2
SEC22B
AARS2
SNRPE
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
ANKRD40
RPL5
MRPS14
SMG7
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
RPS15
ANXA2
HAX1
PRIM2
GFI1B
LSM5
CLTB
SNRPD3
GUCD1
PDCD6IP
KMT2D
RNF6
SEC23B
PSMD6
BRWD1
DPP8
SUGT1
FAM234A
BANP
DDX1
GABPA
ATP5PF
VPS13B
C18orf21
CEP85L
CASS4
PPP2R5B
ZSCAN22
ZNF76
SMIM13
KRR1
ACTL8
U2SURP
NMNAT1
LZIC
PUS10
PEX13
MRPL16
C10orf88
NBPF1
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
MAPK1IP1L
HLA-E
PRPSAP1
MRPL39
RNF125
NOXA1
ITGAL
NFAT5
RBM28
RPS3A
CBWD5
DHX16
ZZZ3
SRRM3
RCAN1
NOTCH2NLA
MRPS33
GSPT1
CCDC150
ERCC6L2
TARS3
TBL1X
PTPN4
CYP17A1
SLC35B1
WWOX
PRMT5
ZNF165
NUP107
GLIPR1L2
ATG101
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
FBXO22
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
LRRC37A3
TMED1
SOD2
RALBP1
GNB2
HNRNPA1L2
DGKZ
GPAM
DNAJC11
SAE1
RABGGTA
STX6
CDK12
CYB561D1
XKR7
HEXIM1
MED4
TSC1
ACBD6
SET
ZNF846
STC1
ATG4C
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
SLC39A3
ATG5
CREM
TM9SF4
EIF2B3
TVP23B
ZER1
RIF1
HEATR1
PRAME
ZNF3
MRPS15
KAT6A
RPS26
WDR70
PHF21A
FAIM
MTOR
ATP5MC3
RPL38
INTS4
P3H4
RAB5C
CIZ1
ATXN7L2
LIPA
CRBN
IQSEC3
LNPEP
ALG14
GARS1
RFX7
QRICH1
RESF1
INKA2
DDX20
ZNF527
PRRG2
NOSIP
COG2
GEMIN7
FABP6
DCT
PPP1R11
EEA1
TMBIM6
FOXJ3
ATAD2
ZMYM5
ABCG1
TMA16
RAP2C
CBWD3
MEX3C
PPIL3
NIF3L1
FAM160B1
INTS2
DISP1
CFAP20
C2CD5
NMRAL1
HMOX2
DDX46
CHMP7
TRMT61B
MMACHC
CCDC163
SREK1IP1
CWC27
NR1H2
SETD1A
RBL1
YBEY
MCM3AP
MAN2A1
PPIH
METTL26
TSPAN10
NPLOC4
ANO8
HIBADH
TRDMT1
SENP1
PFKM
BAIAP2
ANKRD36
VWA8
RBIS
PET117
KAT14
CCDC107
RWDD1
IPO13
DNAJC24
DCDC1
WTAP
PSMB7
NEK4
KDM3B
TNPO3
CSTF2T
TMEM167B
SH2B1
HNRNPH1
ZNF827
KNL1
TMBIM1
POLDIP3
ARMH3
SECISBP2L
CPLX2
ZNF783
ARL8B
RPL29
SLC30A6
LARS2
CCDC174
C12orf73
NOL12
TRAF6
RAG1
UFD1
CDC45
RGPD1
SMIM12
DDX27
AASDH
ASNS
CBR1
RAD52
DHX8
MRPL42
ZC3HC1
CUL5
ZNF529
PPP6C
VRK2
WARS2
RHOT2
THG1L
MEGF8
DPYD
ZNF518A
STRADA
NARS1
KCTD5
ABLIM1
HDAC1
ABCA3
TMEM208
LRRC29
RSAD1
ZNF341
ISY1-RAB43
ISY1
THOC5
SELENOT
RETSAT
NOTCH2NLB
WDPCP
MDH1
RUNX2
CLUL1
DDX41
METAP1
MFSD8
ABHD18
GOSR1
COIL
TNRC6B
PHB2
UCHL5
RO60
NOL11
PSTPIP1
FBXW7
DCP1B
GDPD5
PSMA1
DHRS13
PTPRCAP
ZSCAN12
LTN1
UIMC1
GOT2
MAD1L1
NDUFC2-KCTD14
NDUFC2
ZNF350
SNX16
PLK3
ZNF286A
PARK7
MKRN2
ADAR
TBC1D22A
TRAM2
RRP15
RBSN
PRMT3
STAT6
ALDH9A1
MIER1
SIRT4
PPP1R8
ZNF212
ANXA2R
FUT10
CLPTM1
C19orf48
ATP5MPL
AGGF1
NDUFAB1
UBE2L3
HES3
LRRC59
METTL8
DCAF17
SFSWAP
SLC25A53
YJU2
EIF4A2
RGPD2
SNX19
PES1
CELF1
BMT2
ZNF331
ZC3H6
SCP2
GCFC2
SEC31A
MIGA1
DAB1
TSC22D4
STXBP3
ZKSCAN2
POLR1F
ZNF398
PPRC1
ZNF461
FKBP5
S100A4
CGGBP1
ASF1A
NOTCH2
CALM1
TMEM30A
ZNF383
LZTR1
SLC39A6
PRRC2B
FIS1
RPL26
TMED2
TNFAIP8L1
EXOC2
NDUFA4
KCNH1
TBC1D13
OSGEPL1
ARL14EP
TYSND1
NUDT15
ZNF335
UBE3B
EIF1B
RCOR3
ZNF585A
SLC38A2
GFM1
CDKN2AIPNL
WDR47
TBL3
STAT1
SPATA13
UBE2D3
ZNF570
GTF2B
VAPB
HDAC2
FGD3
HECTD1
TMTC2
NFE2L2
FNTB
CCNG2
AP1G1
SPHK2
RPL18
HEMK1
CCNL1
AHCYL1
ZDHHC6
VTI1A
SERBP1
EIF5A2
ZNF302
ZZEF1
SIRT6
CYB5D2
ANKRD24
VPS13D
RPL22
CRLF3
MRPL38
RFXANK
BORCS8
RAB11A
SYPL1
WDR24
NDUFA6
ING3
CALM2
PSMD11
MRPL45
ZNF25
SASS6
APEH
KDM5C
EEFSEC
BRIX1
ZNF569
THOC3
NUP214
CLASP2
ZNF510
ADNP
GTPBP10
UBOX5
FASTKD5
TADA1
ZBTB20
GOSR2
ANGEL1
TTC14
HIF1AN
TBPL1
UGCG
PIK3R1
ZW10
YAP1
MGST3
PDCD2
NUTF2
CENPT
SCYL3
CEP41
PSMG1
PPA2
LIG4
H4C8
SRFBP1
FAM25E
PIKFYVE
PDE8A
VAMP4
RPS12
HARS2
HARS1
OGT
RPA2
EDC4
ZNF839
APRT
ZNF44
SRSF11
MAML1
MRPL58
TRNAU1AP
EIF2S1
ATP6V1D
POLR3A
KLHDC10
ST6GAL1
TMEM128
ZNF28
CYP4V2
VPS72
KANSL1
ZNHIT6
PEMT
MKNK1
WASHC2C
GOLGA3
YWHAB
INO80D
RINT1
C7orf26
RHOT1
RABEP1
CYREN
USO1
CSDE1
RPL6
TTC21B
COMMD1
TINF2
TRMO
SNX5
MGME1
RPS13
YARS2
GDAP1
USP3
TMEM116
ERP29
EFHD1
GNAL
OTUD7B
LANCL2
TRPC4AP
ANKRD36C
TUBGCP3
ARAP1
METTL18
C1orf112
SNX12
DQX1
C18orf25
CYB5R4
CLPB
TXLNB
RPTOR
CYP20A1
CYB561A3
RANBP2
TMEM138
DNAJB2
MDC1
PNPO
MTRES1
ZBTB6
TCTE3
ERMARD
CCNT1
TMEM183A
TCAF2
YARS1
S100PBP
HMGN4
ZFP91
PPP4R3B
DNAJC16
STMP1
PCYOX1
BRPF1
MARCHF7
SLC25A28
ZNF554
ABHD13
CEP164
TAS1R1
NOL9
IRF9
PCID2
CUL4A
RNF146
PPOX
CNTRL
BRWD3
SIKE1
SMAP2
PSMB2
CD55
TOMM22
CBWD6
PDXDC1
ZNF670
AQR