ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX402531 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◣ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
PRIM2
ZNF562
PPIG
BSDC1
CEP85
ARHGAP39
YTHDC2
POLE4
LUC7L2
FMC1-LUC7L2
FMC1
RABGAP1
NOS3
ZNF623
YPEL3
PRAME
JMJD1C
REEP3
CCDC130
FAAH
KIAA1549
TOP3B
CBX1
STX16
SSBP1
CEP72
ACTL8
SKP2
LMBRD2
SERPINB1
DMAP1
TRMT2A
RANBP1
ACOX3
TRMT44
CYP17A1
BAAT
RIPK1
MRPL40
HIRA
AURKAIP1
TM9SF4
TMEM70
MTRNR2L2
MAPK1
FEM1C
TMCC3
YWHAQ
N4BP2L2
RPS14
ACYP2
TMEM191C
SLC4A1
ATP1A1
LOC102724265
STAU1
PRELID3B
ELOVL2
CD47
SAE1
SNIP1
TIPARP
ZNF426
NECAP2
RBBP5
SPPL3
AUNIP
KCNH2
MTRNR2L8
FAM25E
ZNF561
NUF2
GBA
YPEL1
CRKL
BRWD1
ZNF76
GP1BB
SMU1
PSMB2
HTR5A
TTC32
TTLL12
FABP6
CHCHD2
CCDC88A
TMEM242
CLK4
ARHGAP19
BTD
P2RX6
EIF2D
DCAF10
IGSF3
SAMD4B
WARS2
CEP164
UBE2L3
VTA1
NMBR
MARCHF2
KLHL20
FZD1
PAFAH2
SUB1
TMEM41A
ATP23
MED23
TOR1A
FAM83A
ZSCAN31
RCOR3
ZMPSTE24
ZCCHC4
BLM
FAM207A
PPIL2
WDR43
LZTR1
RNF187
ZBTB6
PDE11A
PPIP5K2
GIN1
GFI1B
TSC1
ANKRD54
ZSCAN25
NDUFA6
MTIF2
DSTYK
GTF2H2
GTF2H2C
KMT2A
CENPV
PFKFB3
SMARCD2
FAM234A
RMND1
ARMT1
BHLHE40
NPAS4
CMIP
MAN2A1
VANGL1
MST1
PEX3
ADAT2
FAM133B
MRPL44
FRG1
ZFP30
NSFL1C
TRAM2
RTL10
GNB1L
DNAJB12
COQ2
CDK5RAP1
PSMF1
WDR36
CFAP69
HDAC11
VAPB
BICD2
TPM1
INAFM2
SF3A3
ARHGEF1
TRUB2
COQ4
NUP214
UGCG
ZNF554
SAR1A
ZNF12
DDHD1
TMC6
RPL37
MEMO1
TMEM222
AGK
MPHOSPH6
NME1-NME2
NME1
ZNF408
ARHGAP1
ADRM1
ALDH3B1
RPS7
HOXC5
ST6GAL1
DRAP1
C11orf68
GTF2H2C_2
TDP2
ACOT13
PHAX
SLC16A5
MICAL3
CSTF2T
NUTF2
CENPT
NDUFS7
SRP9
SORD
SLC44A1
CCDC150
EIF4A2
PRPF3
SYPL1
ACP5
C22orf39
GNL3L
ZBTB40
MTLN
RBBP9
KANSL3
CHD1L
PRKAB2
PKMYT1
TMEM65
ZNF391
PHIP
PAXBP1
RAB37
B4GALT7
SPHK2
RPL18
CYP4V2
RBL1
ARID2
LSG1
AARS2
CCAR2
SNAP29
PI4KA
KMT2D
HDAC1
RAB11FIP1
MKRN3
TFPT
PRPF31
TPR
ODR4
INTS5
TMEM101
DGCR6L
CNGB1
GTF2H4
POLR2J3
RBM28
ZC3HC1
ADNP
CCDC69
SNRNP48
DNAJB2
EIF3F
SLTM
RBSN
SNAP47
JMJD4
CEP76
PSMG2
PRCD
RPS29
MGST3
RPS13
KIF21A
ZNF280D
CCNG2
FAM13A
ASNS
NUDT7
CFLAR
NXPH3
SDHAF3
FAM227B
DTWD1
DNAJC25-GNG10
DNAJC25
MRPL1
TSACC
CCT3
BTNL10
FUT1
USP30
TMEM191B
MTF2
DDX18
ZER1
ITGB3BP
EFCAB7
RBIS
ZNF436
FAM86B1
NACC1
SOD1
LARS2
GPR3
ASF1A
COX16
ZNF117
COX7A2
SYT7
TRRAP
PHF21A
STMP1
SGK1
WDR74
POLR3E
PPP2R5B
PPP6R1
MOB3A
IZUMO4
ZNF789
CCDC59
FAM160B1
DQX1
PRELID2
SCAND1
CPPED1
RCCD1
FKBP5
PPP5D1
CALM3
FOXD2
SELENOH
DCP1A
TMEM43
CHCHD4
ING2
TADA1
C3orf86
CD33
TTC26
WDR70
HIBADH
EXOC2
KMT2C
TLR5
CCDC97
RPL26L1
SOD2
WTAP
SLC29A2
NDFIP1
HLCS
DRG2
INO80C
CBR1
GDAP1
DHDH
ATP5PB
PKNOX1
TTC4
ATXN7L2
AP5B1
SPOCD1
SLC25A51
GTF3C3
RAB23
PTK6
HPCA
SLC24A1
INTS14
EPRS1
METAP1
TLE2
EPS15
API5
ZNF341
FAM3C
JAGN1
STX18
LRP6
TRIM58
HLA-E
ZNF44
BRPF1
LPIN2
FAM98B
SEC22B
UBE3B
TOMM5
GTF3C5
AGGF1
SEC13
RPS15
DHX8
CEP41
PRRC1
ATR
FOXJ3
UFD1
CDC45
RPSA
ARRB2
UTP3
NMNAT1
LZIC
NDUFS3
KBTBD4
SRRM3
DNAJC11
DHX33
ADPRHL1
TOR1AIP1
NOTCH2NLA
SH2B1
TSC22D4
SRCAP
LOC730183
TENT2
KDM1A
ZSCAN30
ZNF609
CDKN2AIPNL
PPP1CC
TRIM52
LEO1
MAGOH
ZNF3
OTUD7A
CD55
ZNF114
REX1BD
CCRL2
DCLRE1B
AP4B1
CEP120
MKRN2
NSA2
GFM2
R3HCC1
SLC39A3
MRPS15
KRAS
ATP13A1
TATDN3
NSL1
WDR11
IST1
TJP3
SSBP2
DCTN6
MRPL48
EFTUD2
CCDC103
EIF4H
BMS1
METTL9
PIGW
MYO19
AGO1
FRA10AC1
SLC25A16
IMPACT
NDUFV2
PHF19
HMGB1
USPL1
MAD1L1
ALDH9A1
POLR2J
ATP5MC2
HES3
EIF2B3
KCTD5
FUT10
WDR47
TKT
FAM86B2
GALNT11
COG2
LEMD2
CLTCL1
ZDHHC18
SNRPE
S100A4
CYREN
RIMBP3C
RIMBP3B
CYB5R1
RCC1L
NOXA1
MRPL42
SAYSD1
NELFB
REXO4
COPS4
RBM45
AP1G1
TNFAIP8
CCNI
ADPRS
SACM1L
THAP7
GAREM1
PRPF18
CYB561D1
SRSF10
AGA
TRIP4
GSTA4
TNPO3
IMPA2
RBM48
PEX1
ANKMY2
FKBP8
ASB6
RANBP9
ZNF808
ARL4D
GTPBP3
SLC39A13
ANO8
PTCD1
CPSF4
PRKCE
EEF2K
C1orf53
KEL
DHTKD1
METTL8
DCAF17
DPY19L4
NBN
C18orf21
ZSCAN22
EEA1
ZSCAN12
SFSWAP
SNX19
KCTD9
CDCA2
PRDX1
VPS37D
BRK1
KLHDC10
TMEM170A
HNRNPD
MTOR
MTMR9
GLRX
ZSCAN26
ATXN7L1
UBE2D2
ATAD2
EIF1B
ACTR3
RIMBP3
PTPRA
PHKA2
RESF1
CCDC174
NCOA2
GORASP2
C21orf58
BCAP29
RIF1
ARL8B
CLPTM1
TIPRL
MAN2C1
RETSAT
ZC3H6
AQR
ARHGEF12
ANKRD40
CAMLG
CENPS-CORT
CENPS
TFAP4
HSPE1-MOB4
HSPE1
HSPD1
RPL22
MRPL58
MFAP3
FAM114A2
SSNA1
ANAPC2
KATNBL1
FZD9
NDUFAF1
RPS20
IQSEC3
SMPD2
PPIL6
ARPC2
GDF15
INTS12
GSTCD
COMMD2
EIF3G
TCERG1
UQCRQ
GDF9
ZNF22
SMG5
SMIM12
PDE4C
EEF1AKNMT
RAD21
IMMP2L
CS
BNIP1
POLG
GSPT1
PCBP2
KDM3B
RFXANK
BORCS8
SASS6
ELP1
ABITRAM
OGDH
MAP3K4
ZNF318
SMPD1
NADK
CREM
PGBD2
PRKAG2
PKD2L2
DESI2
ACVR1
GPR155
PGBD5
AQP8
GDPGP1
CIB1
SUGCT
MPLKIP
NCBP3
ZNF770
PPP6C
BRIX1
SPNS1
DNAJC14
PDAP1
BUD31
TTC21A
GORASP1
VIRMA
MRPL3
RNF125
RPS26
MDC1
YARS1
S100PBP
CCDC7
BARHL1
SYP
FAM20B
AP3B2
ATP5MC3
C19orf48
JRK
CEBPB
CCDC71L
FAM160B2
FOXO6
INKA2
DDX20
FUT3
PPT1
TMEM68
TGS1
CTNNB1
PSRC1
PPIH
CLUL1
USP3
TFAM
H2BU1
H2AW
TNIP1
PXYLP1
GAL3ST4
PRXL2C
TSFM
SIRT6
ANKRD24
GEMIN5
KIF22
INTS10
VARS1
MTBP
MRPL13
MRPS33
PTPRCAP
AP3B1
SRI
LSM8
AKIRIN1
MED18
HARS2
HARS1
SLC45A4
NBEAL2
PSMD5
PROCA1
BANP
MRPL16
TTC21B
GGACT
RSF1
AAMDC
POT1
SPPL2A
REPIN1
LAS1L
TCAF1
PRR5
KDM3A
SNRPB
SMIM13
DGKZ
PRRG2
NOSIP
RUFY2
ZBTB17
PMVK
ZDHHC24
ACTN3
XCR1
NOTCH2NLC
TPK1
TBPL1
RINT1
TMEM168
PRRC2A
IPO9
CLIC4
CAV1
FBXO22
XKR7
UCHL5
RO60
CCNF
CUEDC2
CNEP1R1
TUFM
RAB12
USP35
KCTD21
METTL3
IMPA1
ZBTB26
ZNF517
GCK
SLC19A1
RAP2C
DDX46
SLC39A6
TFB2M
CNST
TOMM6
HEBP2
SCMH1
RAB3IL1
TACO1
SPRYD7
COX8A
NCOA1
MDN1
CT45A10
TMPPE
GLB1
DHRS9
KCNK5
PTPN18
MRPS14
GNB2
NUDCD3
C1orf74
SMAD5
ZNF74
SLC29A3
MRPL19
CIZ1
TRNAU1AP
EFCAB2
SCAF8
CBLL1
SPACA9
AK8
MED15
BCORL1
FAM78B
WWOX
CRBN
OTUD7B
PCTP
SNAPC5
NEK2
NGLY1
TMEM216
UBE2Z
OXSM
PAIP1
TARDBP
LMNB2
NUP93
RUVBL1
EEFSEC
DPH7
CENPF
RFX2
SLC43A2
PPM1F
ARRDC2
SMG7
TRAM1
DHX16
CELF1
IBA57
ZNF268
ZNF668
ABCB10
SUPT3H
ZNF646
FNTA
ZC3H14
DGCR8
RPP21
GTF2IRD2
PTPMT1
MRPS31
INTS4
TMBIM1
GFM1
DTWD2
GINS3
KIFC1
OXSR1
ZNF106
H4C11
ALKBH3
AJUBA
SEC61A2
E2F6
RAC1
CHRM4
PLD4
COMT
PON2
SCNM1
LYSMD1
KIAA1191
FAM8A1
SNX30
KATNA1
TCP11L1
CCSER2
CAT
SLC35B1
NDUFA4
CALM2
CYP51A1
YME1L1
ZFP62
BROX
AIDA
GATB
SRBD1
NR2C2AP
NR6A1
MARCHF7
SURF6
TTC37
ARSK
VPS4A
SLC35B2
CUX1
POLR3B
BRF2
INO80B
RHOG
NAPA
FGFRL1
HNRNPF
PEX7
LSM6
GMDS
LIN9
MED13L
SNAPIN
GALK2
COPS2
DPP8
ARMH3
NDST2
ITM2C
FAR1
EEF1A1
ZNF460
ZNF282
NDUFB2
PINX1
MRTO4
EPB41L5
CCDC50
SCG3
UTS2B
GPR146
CTNNA1
TMC7
SLC12A5
MAPRE2
TMEM167B
STXBP3
ZNF398
METTL18
C1orf112
TATDN1
NDUFB9
ADSS2
CXXC1
KMT5B
SLC35E2A
LPGAT1
POGLUT3
DPF2
TUBA1C
CFAP298-TCP10L
CFAP298
RAB30
AHCYL1
TMEM59
PLK1
ATL3
ELP3
PLAGL1
SPRED2
SUGT1
HEATR1
TCTE3
ERMARD
AIFM1
ZNF621
H4C3
ZFP41
CHMP6
PPFIA4
SLC25A1
EFHD2
GABPB2
CLTC
ZNF335
NFE2L2
KANSL1
DIDO1
ZNF579
GID8
ULK4
SOS1
WDR27
C6orf120
TEFM
NCOA7
PLEKHM3
INTS2
NEK4
CPLX2
GDPD5
NVL
DEDD
CDKL3
OGFOD1
NUDT21
UBE2B
DDX50
MFN1
MYO9B
HAUS8
QDPR
RBM15
ETV3
CYBRD1
AP3S2
PTPN4
RPS19
TBC1D13
DMTN
ZNF165
ALG14
GCFC2
FIS1
CCNL1
ZNF510
GOSR2
VPS29
RAD9B
GCLM
COMMD4