ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10976388 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◣ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L8
BSDC1
MAPRE2
MTRNR2L2
ITGB3BP
EFCAB7
KCNJ15
SF3A3
NME1-NME2
NME1
COX16
MTF2
MMACHC
CCDC163
RCAN1
COPS4
ATF7IP
RPS7
RPL27
KDM3A
CLPTM1
INO80B
DHX16
COX7A2
MED18
ITFG2
TUT1
STAT3
DNAJC16
PPP6R1
KDM1A
NDUFB3
FAM126B
ZNF408
ARHGAP1
TBL1X
SMG5
MITD1
AIFM1
SELENOH
RABGAP1
AURKAIP1
UTP3
DNAJC25-GNG10
DNAJC25
INTS5
SUPT7L
SLC4A1AP
GABPB2
ALG14
SMG8
SLC33A1
STK40
RBBP5
CDIPT
ZNF226
KDM5C
AHCYL1
TCTEX1D4
BTBD19
EIF3F
RCAN2
SLFN12
PAXBP1
PPIP5K2
GIN1
DPP9
STC1
PIKFYVE
EIF2S1
ATP6V1D
RPL38
CCDC174
PIH1D2
NKAPD1
HDAC8
CSNK1E
VTA1
NMBR
MRPS23
ILF2
TFB1M
ANKRD13C
MTBP
MRPL13
RFFL
WDR83OS
WDR83
TMEM101
LY6K
ARMC1
PRPSAP1
CDK12
ISY1-RAB43
ISY1
DUSP6
ALG10B
PSMD3
ARHGAP39
PAFAH2
TRUB2
COQ4
CALCRL
DDX41
GTF2H4
GTPBP3
RPS26
PSMB7
RNF125
ZMPSTE24
RGPD1
RGPD2
BNIP1
RMND1
ARMT1
SPHK2
RPL18
TIMM22
RPL37A
C1orf174
GBA
EFHD1
MICALL1
FAM124B
DMAP1
IFTAP
ATP5MC2
NOL12
SNX17
EIF2B4
GPC6
SSBP1
BANP
ZNF585A
FAF1
COMMD2
ZRANB2
TOMM40
C4orf51
HAX1
ZNF331
PDSS2
CCNI
ADRA1A
DHX8
GOSR1
MED23
DDX18
ATG4C
PSMD9
HPD
PCBP2
YJU2
KRR1
VPS52
RPS18
POLR1H
ARMCX5-GPRASP2
ARMCX5
LRIG2
ZNF56
COL4A6
COL4A5
NUF2
TTI2
C8orf37
ZDHHC6
VTI1A
ABRACL
TIMM10
EIF3D
PACSIN2
MOB4
WDPCP
MDH1
NOL11
ZNF165
IGFL4
RAB30
ACTR6
AP1G1
RPTOR
CCNT1
NR1H3
ACP2
CCDC107
MRPL45
UQCRH
LRRC41
WDR36
LTA4H
UFC1
PPIH
NEURL4
REXO4
TBC1D9
HEATR1
ZNF510
EIF5A
SEC16B
TACO1
ZNF571
ZNF540
MVB12A
MDM4
CALCB
SNRPB
RAD51AP1
C12orf4
MED11
NCOA7
FBXW7
CYB5R4
LSG1
PPRC1
PHF12
NPAS4
TMEM30A
RNF207
DBF4B
POLDIP3
GPATCH3
GTF2B
FDXACB1
C11orf1
B4GALT3
CRADD
RPL11
DNM2
ZBTB45
BRF2
ZNF286A
GALK2
COPS2
MRPS15
TMEM208
LRRC29
MRPL1
GOSR2
HIF1AN
GPR137
LURAP1
NEMF
INTS4
TM2D1
PRKCI
ZNF585B
YWHAQ
ZNF570
ZNF569
CDC5L
DNAJB12
INO80C
RUVBL1
IPO13
SH2B1
MAN1C1
GSTA4
SCNM1
LYSMD1
DCT
PHB2
PES1
RPA2
OAZ3
MRPL9
ZBTB40
SREK1IP1
CWC27
ZNF484
DCP1A
GTF3C3
SLC25A53
ZNF790
ZNF221
NUP54
PIGL
PLEKHG1
SIAH1
PEX3
ADAT2
TBC1D19
SLC35B1
NR1H2
PSMB6
FRRS1
C11orf49
RPL22
METTL18
C1orf112
SF3B5
LYPLA2
UBQLN4
LAMTOR2
SRRM1
IL17F
TMEM242
RPL26
COASY
TRAPPC3
TTC32
AASDH
THG1L
RBM8A
EFR3B
SULT1C2
NSA2
GFM2
EIF2B3
STAT6
GPN3
FAM216A
MAP3K7
SUPV3L1
OBSL1
INHA
CDK5RAP1
TRMO
MED16
DSTYK
TEFM
ZNF461
SLC39A9
ERH
TTC5
UQCRC2
CCR7
IFI6
RABGAP1L
KANSL3
TTC26
KAT7
EFCAB14
CMSS1
CORO2A
GORASP2
RPS12
EIF3E
DNAJC11
ETFBKMT
ELAC2
USF1
ELOC
GALM
RC3H2
FOXO3B
U2SURP
SIRT4
SNIP1
POLG
PRRG2
NOSIP
SLC30A6
TRIM5
UTP25
ZNF180
PBLD
HNRNPH3
IPO4
RTTN
NOP16
HIGD2A
CEP120
PPIL3
NIF3L1
UFD1
CDC45
ARL14EP
TAS1R1
NOL9
KIF2C
SMIM12
PARP2
DHRS13
CLASP2
MZT1
BORA
AFG1L
TFPT
PRPF31
MAGOH
UROD
HECTD3
TIPRL
TTC39A
CCNC
MRPL48
CDK19
AMD1
ZNF350
ZNF383
KIAA0319
OSGEPL1
UBE2Q1
CUL2
ZNF48
SEPHS2
MRPS18C
HELQ
TSFM
PLK3
KDM8
EFTUD2
CCDC103
PCNP
RPH3AL
USO1
VPS35L
ZNF184
LUC7L2
FMC1-LUC7L2
FMC1
MTR
PUS10
PEX13
TIMM9
KIAA0586
ACVR1
RUFY3
INSYN2B
SNRPG
CCDC59
CCDC97
RPL5
CLASP1
PIP4P1
CHST4
NECAP2
NUP107
CCDC77
STRIP1
CAND1
PSME3
TATDN3
NSL1
RWDD1
SCP2
TTC14
NOLC1
SIN3B
OS9
LRP6
C18orf21
PRMT5
PPP1R8
CELF1
FNTB
RANBP2
PDE12
SLITRK5
ILF3
GABARAPL1
ZW10
FAAP20
RLF
KXD1
PHF5A
ACO2
PKDCC
PAMR1
TRAPPC8
NOL8
CENPP
RPL18A
INPP5B
CSDE1
CWC25
ZNF260
MGRN1
CASP10
SMU1
SMARCD1
HAUS4
SRSF1
ZNF793
TRIM2
POGLUT3
RAMAC
CSNK2A1
ARL14EPL
TMED1
RPL29
NKAP
HIRIP3
ARNT
TMX1
DNAJB4
ATP6V0D1
DEDD
SRSF4
BAG6
FUBP1
TAF15
POC5
SYCP2L
RITA1
DDX54
FASTKD2
PPIG
SDHAF3
ZSCAN30
AAR2
HEMK1
GNAL
CZIB
POC1B-GALNT4
TIMM50
TBX18
RPS3A
DNAJC24
DCDC1
HBS1L
AJUBA
DDX42
CCDC47
TUFT1
MBNL1
CEP162
C1orf109
TMEM128
INTS9
HMBOX1
MRPL15
RIOK2
COPE
DDX49
MAN2C1
ALG10
TMEM259
NUDT15
SCYL3
UBB
PRCC
TRIM46
KRTCAP2
TGDS
C19orf53
ZNF565
ZNF146
ACTR1A
SUFU
MTIF2
QRICH1
DDX46
NEK4
TSSC4
BOLA2
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
NEU1
KAZN
FIG4
AK9
SEMA5B
TRMT5
SLC38A6
CREM
RBM25
UBR2
C3AR1
MSL2
UTP11
NUP205
C9orf72
ZSCAN4
JMJD1C
COA6
UIMC1
EIF5B
PUM3
TXNDC9
ACBD5
GPR180
EMSY
MBNL2
AP3S2
N4BP2L2
RBM45
MRPL24
NUP35
LOC644090
NDUFS7
RIF1
CHMP7
PREPL
CAMKMT
RCC1
NFYC
BMF
DRG1
RPS27
TMEM102
RPL37
NBPF1
MEGF8
YIPF2
TIMM29
NFX1
ZNF2
THAP6
NOB1
OXA1L
ZMYM6
OSCAR
NDUFA3
CLN3
ORAI3
FUCA1
TIMM44
SGTA
ZNF806
WDR74
LMAN2
THRAP3
AKR1A1
C11orf65
GTSE1
HMGB1
USPL1
DRG2
CFAP298-TCP10L
CFAP298
SUGCT
MPLKIP
RAB18
RAB5IF
NRL
DCAF11
OGA
MYO9B
HAUS8
DDX21
USP48
INKA2
DDX20
SRFBP1
IRF9
CCDC90B
EIF2AK3
ZNF875
MPDU1
LOC100996842
CLNS1A
GABARAP
TRMT112
PRDX5
SH2D5
SESN1
CEP57L1
SNRPD3
GUCD1
MRPL19
MTOR
COIL
PARK7
ATP5MPL
CENPF
MAGOHB
SLC35E2B
SLC35F2
HERC5
DIPK1A
MNAT1
NSUN4
TNRC6B
TOMM22
TAF13
ENDOV
DYNLRB1
MRPL44
RERE
COPS7B
BAIAP2
PSMA1
TRNAU1AP
TTC21B
OSBPL8
RNF216
CMPK1
PDE6D
ZFYVE26
CALHM5
SLC7A8
ADPRS
TNPO3
TMEM167B
ZNF335
UBOX5
FASTKD5
USP4
MAD2L1BP
TNFRSF19
SLC7A11
ARL17B
ARL17A
GTPBP2
MAPKAPK5
IFI16
GCNT2
SLC35E4
ADGRF2
PYDC5
TRIP4
POLR2J3
ZNF829
ZNF568
SLC39A3
CSTF2T
UBE3B
YARS2
ACBD4
STARD10
TNFAIP1
IFT20
ATP5MF-PTCD1
ATP5MF
FBXO38
CACYBP
TEDC1
ZNF547
TRAPPC2B
RPS6KB2
MSANTD3
ACP3
CES3
ZNF230
SLC1A3
ZMAT2
GMEB1
SULT2A1
AARS2
C19orf48
HMGN4
TOMM20
SLC25A32
DCAF13
DYNC1I2
CABIN1
TBC1D23
PNISR
TXNDC17
KIAA0753
SCN11A
NSUN3
DHFR2
WDR48
GRWD1
TSR1
SGSM2
RSPH4A
PHIP
CLUAP1
RBL1
ZCCHC8
RSPH3
ING4
MUC1
PSD
KNTC1
CTU1
ADIPOR1
RACGAP1
ZNF345
TTLL12
SMG7
MRPS33
RANGAP1
RSL24D1
NDUFB7
RNF43
S100A13
AMPD3
RBM15
PYROXD2
PSMB5
S100A1
SNRPD1
MLEC
CSTF1
AURKA
RPL10A
ATAD5
ZNF268
COPS7A
CD2BP2
HEXA
ZFC3H1
THAP2
CCDC43
BPNT1
SPRY1
MRPL3
CEP85L
HEXIM1
FAM13A
ZNF529
DYNLRB2
MRPL54
APBA3
ADGRL2
ZNRD2
SNRPB2
TM9SF4
TAF11
ZNHIT3
ARF4
ANKS1A
TRIM38
PDE7B
FGD4
SULT1C4
DNAJA3
FARSB
HTR3A
NFE2L1
GPRC5A
RAD52
CGGBP1
C3orf38
ZNF791
ZNF490
MAST2
ZNF668
ZNF646
ERLIN1
HSPA9
ARHGAP24
EYA3
CACHD1
WBP11
C12orf60
DDIT4
BOLA1
ZNF391
VIRMA
METTL26
DYRK4
TAF12
EMC4
SRP54
FBXL19
CDK7
NXT2
TSSK6
NDUFA13
LMNTD1
C20orf96
MRPS14
LSM5
CFAP20
ZNF212
CALM2
BTRC
SPATA5
NUDT6
ANKRD17
LIN54
ENDOG
APOL2
WASF2
HPS5
GTF2H1
NME7
BLZF1
ABCB6
APOBEC3B
BMS1
TMBIM1
ZNF302
RPS13
RPLP0
ZNF613
ZNF566
CNOT1
COPS3
EML2
STX16
TMBIM6
SRSF11
SLC25A16
LRRC40
CREBL2
SUGP1
MAU2
TXN2
RAB3GAP2
HDAC5
HP1BP3
NUDT13
NHS
IFIT3
PTCHD4
F2RL2
SRSF10
TAF7
CDK4
SPAG9
CASP8
ZNF254
DYNC2H1
NUFIP2
SLC18B1
ZUP1
RHNO1
FOXM1
WDR55
ATP5MC3
C2CD5
ZNHIT6
TXLNB
DSE
UBL7
MEIG1
MORC3
IMP4
CCDC115
ERCC1
SIRT2
NFKBIB
TSPYL4
ZNF225
CDRT1
ELSPBP1
SAR1B
STAU1
GLIPR1L2
DDX27
TAF5
PSMD8
KIFC1
KBTBD3
AASDHPPT
CHD8
COG3
CTH
NECAP1
RPL39L
TPR
ODR4
POLR3A
MTMR9
MFF
DHPS
COMMD9
TRMT1
ISG20
BZW1
SLC25A45
NUP42
MEAF6
ERAL1
PIH1D1
FRG1
RPS14
DCLRE1B
AP4B1
WDR70
PRKAG2
HAUS6
ATP2C1
TYW3
CRYZ
ZNF879
MIS18BP1
MICOS13
HSD11B1L
NDUFA9
AKAP3
ZFYVE1
CCDC130
EPRS1
THOC5
NDUFC2-KCTD14
NDUFC2
SLC27A4
HIBCH
CEP350
PDCD6
MZT2A
PROS1
CLCC1
ZNF497
DIMT1
GAR1
CUL3
RPL34
SMC3
COA3
CNTD1
BACH1
NOL6
NAA40
RPS29
YTHDF2
GARS1
SENP1
PFKM
RRP15