ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799531 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◣ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

TMEM70
CAMK1D
SLC29A2
TMSB4Y
GDPGP1
CIB1
ITGA4
GBA
EPS8
DUSP6
SAMD4B
RUNX2
EXO5
TTLL12
RAB5C
THNSL2
KIAA1549
ITGAL
ZNF571
ZNF540
TSGA10
C2orf15
YPEL3
SLC38A2
DMAP1
SKP2
LMBRD2
CENPV
PSTPIP1
PUM1
PAXBP1
THAP11
ORC4
MBD5
MRPL44
GMPS
NSFL1C
RAP2C
NUF2
ING2
CCNF
DGKZ
SFT2D3
EIF2D
MTF2
RPS7
INTS12
GSTCD
TENT4B
PEX3
ADAT2
NDUFS7
RAB37
DUS1L
MED23
NAP1L3
FAM133A
PIGW
MYO19
FAM227B
DTWD1
RAD54L2
B4GALT7
FAM207A
DCAF10
HTT
TTC32
MLEC
MRPS31
TMEM41A
ADORA2A
TFPT
PRPF31
NDST2
NCBP3
KCNJ15
PSRC1
SLC44A1
SSBP1
POLR3B
STX16
NDUFAF1
NFYB
C17orf75
VWA8
CLUAP1
AURKAIP1
SETD1A
KANSL1
STX18
ANKRD54
ZNF341
P3H4
FKBP10
TDP2
ACOT13
TPM1
TMEM68
TGS1
DRAP1
C11orf68
RPLP0
ALG10B
SLC25A51
CTNNB1
ZNF226
KMT2A
RBBP5
DPY19L4
UBE2G1
NME1-NME2
NME1
ZCCHC4
SPEN
TSEN15
PIK3R4
TMED2
NLRP1
FRG1
PACS2
BRF1
TRIP4
RESF1
TBL1XR1
WDR55
RPL37
DCP1A
SPATA13
STX6
C7orf26
LSG1
RPL26L1
POLR2J3
MRPL21
IGHMBP2
DPP8
SF3A3
ZZZ3
WDFY1
STRADA
TNRC6B
NBN
RPS29
TOR1AIP1
ZMYND11
ZBTB20
IRF2BPL
ZNF829
ZNF568
FRA10AC1
TBC1D19
BRWD3
ATP1B3
CBR4
SCAND1
NOTCH2NLC
COX16
HMGB1
USPL1
ATR
NRG2
FGFBP3
FLI1
ZMPSTE24
SRRM3
PREP
ANKRD40
TTLL1
TMEM43
CHCHD4
KDM4B
NMRAL1
HMOX2
FKBP5
CASP3
GTF2H2C_2
GTF2H2
C18orf25
ANXA2
GAA
SEC13
ZBTB2
ITM2C
USP45
INO80D
IL2RB
OSBPL11
TMEM242
NPAS4
LRRC37A3
KPNA4
NFAT5
ZNF765-ZNF761
ZNF765
ANKH
PHIP
GTF3C3
HSPE1-MOB4
HSPE1
HSPD1
ARHGEF6
SNAP47
JMJD4
CPLX2
FAIM
RRN3
TMEM116
ERP29
C3AR1
RPL27
DPYD
FAM118A
SUGT1
ZBTB39
U2SURP
NDUFB3
FAM126B
CDK5RAP1
PPP2R5B
ZNF28
RPS20
ZNF555
HNRNPA1L2
PIM3
MRPL19
CYP4V2
PARP14
SIGIRR
NARS1
QSOX1
PPIP5K2
GIN1
NOTCH2NLA
GRPEL2
TMEM65
SNX19
GTF2H2C
VPS13D
ISM1
PRPF18
RPSAP58
KDM3B
UBE2O
AANAT
CCDC114
EEA1
PRRC2B
ZNF562
NSA2
GFM2
PNKP
NOXA1
GABPA
ATP5PF
SLC33A1
ARAP1
GTPBP3
ANO8
TGFBR2
ERCC6L2
BACH2
LPCAT4
EP400
HENMT1
IPO4
GNB2
SLC39A13
LIPA
RFX7
PSMF1
ZNF398
EIF3F
RTTN
ZBTB40
MND1
CPPED1
CALM1
ZNF827
SESN1
CEP57L1
SELENOT
USP30
TNFAIP8L1
TMEM177
TLR6
MRPL3
ACBD6
PSMG3
RFK
RALBP1
RBMXL1
KYAT3
KAT6A
ANKRD36
KMT2D
ZNF783
CAPRIN1
FAM133B
RWDD3
AAR2
ZNF605
KIAA1191
PDS5A
DRG2
PTPN4
TBC1D13
POLE4
ASF1A
SAR1B
COA6
HNRNPD
PXK
ZNF510
SMIM8
ITPRIP
ARL8B
MAPK1IP1L
DNAJC25-GNG10
DNAJC25
ADPRS
PHF21A
USP3
RNF6
RUFY2
ACAP3
PUSL1
CENPS-CORT
CENPS
YTHDF2
SNX17
EIF2B4
RASGRP3
RHOT2
BNIP1
KRTAP16-1
TACC1
DDHD2
TBRG4
IMPA2
TOP3B
VPS28
COPS7B
TXLNB
NEMF
SET
IARS1
CYRIB
POLR3E
SLTM
HES3
DSE
TSPYL1
FAM102B
RILP
METTL9
DDX18
NSUN4
YAP1
RPL29
PCYOX1
R3HCC1L
SNX16
SLC35B2
ZC3HC1
R3HCC1
INTS4
ATF1
CCDC59
NDFIP1
RAB12
HMG20B
PAFAH2
YPEL1
SMG8
MRPS14
NINJ2
NOTCH1
MYO1G
ACSF3
NAA80
HYAL3
TPK1
ALG10
DSTYK
C10orf88
FAM160B1
SLC43A2
APEH
NOTCH2NLB
TUBGCP3
EIF1AD
BANF1
TSFM
PUS10
PEX13
PRKCE
ATP5MC2
BMS1
ZER1
FOXJ3
TCAF2
ARID1A
PPP3R1
ZC3H6
TBC1D10C
TINF2
NRF1
AGK
STOML2
ABLIM1
CCDC7
DUSP7
CYP20A1
C8orf33
ARMH3
LTBP2
KCMF1
SLC24A1
INTS14
RPS14
ANKRD36C
VPS4A
CNTROB
RSAD1
GEMIN7
FEM1C
SRI
ACTR6
UBE2F
NUP54
USP1
LANCL2
PCBP2
ATXN7L1
WDR43
MAP3K5
SYPL1
EIF3E
CSNK2A2
SMARCC2
DCLRE1B
AP4B1
TTI2
TCTN3
TRAF6
RAG1
TMEM183A
GGNBP2
GOT2
RSF1
AAMDC
ADRM1
SDHAF3
ROBO3
NELFB
LUC7L2
FMC1-LUC7L2
FMC1
RHOT1
ALDH9A1
RB1CC1
ANXA2R
LIG4
ABHD13
TAS1R1
NOL9
EIF5A2
BCL9
TOB2
PCID2
CUL4A
ITGB3BP
EFCAB7
ATXN2L
B3GLCT
CLUL1
EVL
ZNF391
GLS
HEXIM1
NOTCH2
SNX5
MGME1
UBIAD1
INO80C
EIF4A2
ZNF773
NDUFS3
KBTBD4
ING3
NBEAL2
MYO1D
ZNF148
CFAP298-TCP10L
CFAP298
HUS1
WWOX
GSPT1
RCOR3
RGPD5
RGPD6
JRK
RGPD8
CDKN2AIPNL
SNRPD1
CD5
GSTA4
FAM228B
SF3B6
SLAMF8
SNRPB
TMF1
DOCK8
OCIAD2
MFAP3L
FAM98B
LNPEP
METAP1
EIF1B
REEP5
KAT6B
BRPF1
ZNF74
VTA1
NMBR
HIBADH
LCP1
KBTBD8
HMCES
ZNF561
ZSCAN25
PRICKLE4
FRS3
TECPR1
MRPS23
RMND1
ARMT1
WIZ
NDUFAB1
ALG5
KLHL24
ZFP36L1
BRD7
DNAJC11
GARS1
UCHL5
RO60
CEP135
ZSCAN12
SNX18
GGACT
GNG2
RABGGTA
TRMT61B
KDM1A
PSMB7
TES
RABEP1
ZNF846
USP4
POFUT1
PLAGL2
KLHL20
TEFM
TAB1
SH2B1
ATP5MPL
EDC4
MTERF1
CPSF1
FIS1
WDR47
BRIX1
RHOH
CREBZF
CIPC
ARID1B
SMARCD2
TRIM25
FAM53B
PRELID3B
ERLIN2
TRPC4AP
XKR7
KRAS
ATG101
WDR70
ARHGAP30
NME6
ALDH16A1
SERBP1
WDR36
CMPK1
MRPS2
C9orf116
TMEM222
GALK2
COPS2
TMEM101
MRPL38
RNF125
AOAH
HTR5A
LAMP1
THUMPD1
HS1BP3
SNRPB2
PIP4P2
CD83
TMIGD2
MRPL1
CCNC
ZNF350
TRMT2A
RANBP1
TSPAN10
NPLOC4
SEC31A
CDK12
CSGALNACT2
PHB2
ANKRD46
SMPD2
PPIL6
ACOX3
TRMT44
RUVBL1
PXYLP1
ATL2
RABGAP1L
TBPL1
BUD13
SLC48A1
MAN2C1
RERE
MED4
PPP1R11
TADA1
SIRT6
ANKRD24
SPIDR
LRRC75A
TATDN3
NSL1
ATF7IP
SLC27A4
ZFYVE9
SELENOH
GORASP2
USP12
CRBN
TRDMT1
SNX12
MRPS35
ARL6IP5
RBM45
CDK1
FBXW5
C8G
CNOT6L
DDX1
TRAM1
WASL
PDHX
APIP
OAS2
MAF1
PGS1
IST1
SPDYE14
SPDYE10P
PLEKHG4
ARFGEF1
GALE
HEBP2
CDC42SE2
SLC35A3
ZNF770
SCAF8
CCDC42
RPS19
EGR2
COX19
TMBIM1
ENDOD1
LACTB
KLHDC2
SLC39A3
VRK2
TMEM167B
CRLF3
PUM3
SCRIB
ZNF875
CBX1
VAMP4
ADPGK
STARD10
COIL
FBXO4
TLN1
CREB3
MOB4
MRPS34
EME2
AP3S2
CEP120
SDK1
MRPS15
PPIB
CSRP1
OTUD7A
TIGD1
EIF4E2
SECISBP2L
AMN1
HIF1AN
SNX1
RGL4
CEP85L
ZNF786
TUT7
KLLN
MAP2K5
ERBIN
EEFSEC
ZNF254
ZFP64
GET4
CASC3
PPP4R3B
ABCD2
VSIR
INSIG1
LLGL1
KANSL3
GLTPD2
IL7R
NECTIN1
POLR3G
MBLAC2
TOX4
RAB2B
NCAM2
PSMD3
C18orf21
MKRN2
TOE1
MUTYH
HINT2
GPAM
STAT1
PNPO
TPGS1
PABPC4
EIF3G
ANKRD44
RBM28
ZNF14
ZC3H7A
BRDT
TTC4
OPA1
RASSF5
CAPRIN2
MRPS18C
HELQ
MRPL39
ZMYM5
ADAR
PDE8A
SBK1
ZNF710
HECTD1
XPO1
PARP1
CLN5
ADH5
CAT
NOP16
HIGD2A
NBEA
TEX261
MAB21L1
PDS5B
NUP107
PSMG1
USP15
EEF1AKMT2
LATS1
CARM1
S100Z
CLTC
FBXW4
STAT3
SUGCT
MPLKIP
PSMD6
C2CD5
NDUFC2-KCTD14
NDUFC2
LPIN2
AFAP1
LOC389199
POLR1F
MRPL17
LAS1L
MTMR6
PPP6C
POLR2C
FBXO22
KCTD5
MARK2
CDKN2AIP
USP42
BIN2
TSEN54
CASKIN2
BRF2
SMIM13
PYCR3
COMMD2
KMT5B
MIF4GD
DOT1L
STAM2
LRCH1
MAGOH
GCFC2
ANGEL1
RHEB
KLF3
STAU1
SULT1B1
CCNL1
PTEN
CEBPG
ZNF3
ZNF518A
PDXDC1
TMEM170A
CNPPD1
RETREG2
QDPR
RP9
TIMM9
KIAA0586
SENP1
PFKM
TDRD7
CNEP1R1
RASGRP1
ZMYND19
LARS2
PROSER1
NHLRC3
PPIL3
NIF3L1
PDCD5
ZNF44
SH3GL1
RCC2
IREB2
MRPL53
HEXD
TACO1
CCAR2
DCTN6
SKIL
CHD1L
PRKAB2
DHRS13
BARHL1
RAB3IP
SAMSN1
ANKLE2
NOC3L
CAB39
ATPAF1
VPS37D
ZNF641
MITD1
GNE
IRF2
ZNF384
PPM1M
ZBTB45
RAB18
FAM217B
PPP1R3D
HDAC1
PTPRCAP
RAF1
VHL
HLA-E
ATG5
CRACR2A
STMP1
CFAP69
UFL1
OXCT1
NOP58
TBC1D9B
NECAP2
ZNF638
CLBA1
FBXO32
CHIC2
RABEPK
ZNF236
PLEKHA2
MBTPS2
TTLL4
ZNF501
ZNF517
ZDHHC15
SETDB1
INTS5
CCDC6
CHST2
YBEY
MCM3AP
RNF145
CITED2
PRKAA1
NIPA2
NIPSNAP2
TRUB2
COQ4
LONP2
ABCC11
RNF13
TRIM52
GTPBP6
INPP5E
NVL
KLF5
ZNF549
RFX3
MYO15B
SEC23B
RPL38
FBXW7
BCKDHB
KCTD6
SPECC1L
RBIS
MNAT1
NMNAT1
LZIC
TYSND1
CLK3
NCOA3
INTS10
RRP8
ILK
ZNF613
ANKAR
INPP4B
ZFP30
RIC8A
BET1L
PAK2
SENP6
INAFM2
ARL14EP
NEGR1
TRRAP
RAPGEF1
CCDC150
CIZ1
PWWP2A
PRF1
HINT3
NIT2
ANKRD52
CNOT11
N4BP1
BIN1
LSM5
TRIP11
CXCR5
CCDC88A
COX18
ICOS
CTCF
FLYWCH2
LRRC59
DNAJB2
SNU13
SAAL1
TESK1
MRFAP1L1
MFF
TMEM168
HERC1
CDC73
UBQLN1
LYPLA2
RTL6