ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945294 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◣ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

RAB37
HLA-DPA1
YPEL3
TRPM3
BAGE4
BAGE3
BAGE
ZNF605
BEST2
PIK3R1
PCGF3
BAAT
KSR2
KCNJ15
FAAH
NUDT4B
HTR2C
GFI1B
ZNF611
RTN1
MAP4K5
BTD
PHOSPHO1
CCDC126
KCNJ2
SLC25A38
MCC
ZNF562
FAM104B
GPR39
ITGB3BP
EFCAB7
IQSEC3
DEFB124
EDEM2
AKAP10
TKTL1
TEX28
ZCCHC8
PRKG1
C2
PROS1
UBXN2A
HIVEP3
SLC30A8
S100A4
FUT3
FRMD4A
TBC1D8
ACYP2
DPY19L2
ACTL10
TBC1D30
NPFFR2
UBE2O
AANAT
FEM1C
ZNF114
PACS1
FAM25E
ME1
ABCG1
KLF17
LOC728392
ST8SIA6
VLDLR
PGBD1
NECTIN3
PDE8A
PSMB2
LRCH1
TRAK1
HRH3
LAMP3
SLCO1B3
ANTKMT
ZNF804A
ZNF280D
TSKU
ZNF117
GOLGA6L2
THSD7A
CNKSR2
NFRKB
SWI5
GOLGA2
CEP72
ZNF426
C5orf24
TBRG1
LYPD1
DLK2
EIF4E
PRKAA2
SEPTIN11
SULF2
HCN1
DUSP6
RAB30
NOD1
SAMD5
IKZF3
SAV1
YWHAQ
HDAC2
APLN
NOS3
ZNF44
ARHGAP22
CMTM3
TMEM131
MERTK
DGKK
KCND3
KCNK3
VSTM5
EYA1
CDC42BPA
TMEM52
TSPAN14
GTF3C5
ZNF160
SLITRK4
CCND1
KCNE1
PRELP
PIP4P2
MEST
NR2F1
NIPAL1
CNGA1
EBF1
PANX1
CNTNAP3B
TACC1
SLC8A3
FSTL4
PTPDC1
NOVA1
PDE6B
MAP4K3
NTM
UBLCP1
FZD3
RNF144A
EPHA5
CLUL1
RBMS3
LY6L
FABP6
SUZ12
PLD5
TADA1
PDE2A
SEMA3D
PLOD2
ST6GALNAC4
CEP85
PAM
ZNF211
NCK1
PCGF6
ATP12A
MYRIP
SERPINF2
SPATA18
EPS8L1
KCNIP2
LRRC45
CENPX
ESPN
ZNF561
KLHL40
SLTM
MRGPRX3
CCDC74A
SPIN2B
MAGEF1
OPHN1
SLFN11
ZNF676
TMEM40
PRUNE2
ZNF860
OSBPL10
TGFB1I1
RRBP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
YAP1
LYPLA1
SH3KBP1
RIOX1
CNTNAP3
SOWAHB
NEUROD4
ADAMTS15
SCN4B
FZD1
C1QL1
FAM50B
DHRS4L1
SST
CD80
CHRNA3
BTK
ZNF496
PRRT2
ADAMTS16
ORC4
MBD5
DCTD
ARF6
KDM4E
METTL21A
PKMYT1
KLF3
FGF18
ZNF324B
CAMSAP2
FILIP1
RFWD3
RYBP
GALNT13
CCDC177
RBPJ
SMCO4
B3GNT2
TEAD4
SLC17A7
SNCB
EIF4E1B
DNAJC13
EML2
SIGLEC11
CRCT1
TMCO6
ZNF563
NEGR1
SPOPL
SSX2IP
RNF220
ACTR1A
SUFU
SATB1
POLE4
STRBP
VGLL3
UFSP2
NRSN2
NAA20
THAP4
ADAMTS3
CLSTN2
WDFY2
FAM102B
GNG2
FUT8
OLFM3
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
LXN
HIVEP1
PDE11A
PURA
PYCARD
PIK3CA
PKD2
SCUBE1
POTEF
FGD3
EEF1AKNMT
TARS3
AGGF1
SCCPDH
ATP2C1
ANHX
CDA
ZNF780B
PDE1B
NOS1
IL1R1
MAST2
ACBD5
CT45A10
TP53BP2
FABP7
RBMS1
CROCC
CAB39L
ELMO1
SETDB2
LRP8
SLC6A1
PDE4A
TMEM237
DPP6
GUCY1A1
ANO6
SEMA6D
LONRF2
NCOA7
ALAS1
TENM4
UBQLN2
ADAMTS5
SIX3
TDRD3
RAB6D
VBP1
FERMT2
GDNF
PAPSS2
SLC35A3
STX2
TRIM56
ART1
ARID4A
CDH10
ZNF888
LRRC2
GABRA2
ZNF567
GSTK1
GJC3
H2BS1
HINT1
DLG3
DMRTA1
RAB23
KCNS1
RORA
MYOD1
PXDN
CYREN
CMPK2
CRH
PYM1
NPHS2
AMACR
MARK3
RFPL3
ACSL1
NFE2
NR2F2
FAM240C
NUPR2
GSTA4
CNPY3
MTFR1
PLXNA4
RCAN1
HERC6
OSBPL1A
GPC5
SORCS2
SCHIP1
PCDHAC2
POTEE
GMFB
ATXN7L1
PTPRN2
ALDH7A1
PTH1R
MTIF2
F8A3
F8A2
F8A1
TAS2R4
CMYA5
HP1BP3
NLK
NEXMIF
SLC27A2
DHRS2
GALK2
CCL3
BCL6B
OTUD7A
THEG
IQGAP2
GPR50
ERVW-1
SNURF
SNRPN
RPS6KA2
LCORL
BBX
MAEA
RIPOR2
ATP23
UACA
IKZF1
RGS7BP
PAH
ASCL1
ZC3H14
C3orf80
NFATC2
NRG1
RNF128
PPP1R2B
BEND7
GDA
ST8SIA2
PARM1
SHB
FAM98A
PABPC3
RHOXF2B
RHOXF2
GNL3L
ROCK1
TLK1
CTSB
PCDHAC1
H3Y2
CAMK1D
PIK3C2B
CADM2
PLAAT2
PIAS3
CNOT6
SLC9B1
C9orf85
ABHD17B
WDFY3
RGMB
DUSP16
TMEM60
PHTF2
GRAMD1C
SLC50A1
PCDH19
CBLL1
PREP
ADAMTS2
SLC27A3
CCDC74B
STARD3NL
NDST3
GLI2
SNX33
ZFYVE21
XRCC3
DAZL
RBX1
PPIC
SP6
PRDM1
CHST4
MED12L
DMRT3
OTUD6A
NDRG4
DCLRE1B
AP4B1
SNRNP25
POLR3K
TBC1D15
RNF130
ZNF778
SPAG5
ADCY5
DMRTB1
FAM171B
MEIS1
ZNF623
FANCF
RAB6C
EGLN1
TMEM164
QSOX1
BECN2
PCDHGB6
EPHX1
IRX3
DYNC2I1
PCDHGB1
AHCYL2
ITGA7
CCL28
JMJD1C
REEP3
GOLGA8A
NCAM2
ZDHHC22
PLXND1
NPNT
HAPLN4
ZNF468
RABGAP1L
TSNARE1
CDH2
PPP1R1A
TUBE1
FAM229B
NSMCE4A
SDC2
IGFBP3
PAXBP1
XKR4
QSOX2
ABI2
ASCL5
TEX13C
EXT2
PLAAT5
ZC4H2
CAMK2N1
GALR1
KBTBD3
AASDHPPT
SPIN4
CAMK2D
MBNL1
ENTPD1
SCMH1
LMX1A
LOXHD1
PROSER1
NHLRC3
RALYL
APBB2
FAM174B
SMAD3
SOX11
BSDC1
MTRNR2L2
MTRNR2L8
GBA
RABGAP1
CBX1
NUF2
RBBP5
RPS7
MTF2
SSBP1
DMAP1
AURKAIP1
SAMD4B
LUC7L2
FMC1-LUC7L2
SF3A3
PUM1
STX16
ARHGAP39
NDUFS7
MED23
NME1-NME2
NME1
COX16
RPS29
CCDC130
PEX3
ADAT2
TMEM41A
TTLL12
TMEM242
DCP1A
EIF2D
RPL27
INTS12
GSTCD
FMC1
PPIG
ZMPSTE24
NDUFB3
FAM126B
FRA10AC1
MRPL44
GDPGP1
CIB1
DCAF10
DSTYK
NPAS4
HMGB1
KMT2A
TBC1D19
MAPRE2
ACOX3
SELENOH
USPL1
GTF2H2C_2
ZFP30
SKP2
LMBRD2
TRIP4
GTF2H2
SLC24A1
INTS14
TTC32
TRMT44
STX18
GTF2H2C
TMEM70
POLR2J3
RPL37
TOP3B
DPY19L4
FAM227B
DTWD1
DRG2
DNAJC25-GNG10
DNAJC25
PRELID3B
PAFAH2
COMMD2
SLC33A1
ATP1A1
POLR3B
TOR1AIP1
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
MRPS31
YTHDC2
UTP3
PPIP5K2
GIN1
CCDC59
RBBP9
CLK4
CAT
ALG10B
IPO4
RAD54L2
SLC44A1
FRG1
DNAJB12
SLC25A51
SMARCD2
GTF3C3
RPS14
EIF3F
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GTF2H4
ANKRD54
LSG1
EPS8
INTS5
BCAR3
NSFL1C
MRPL40
HIRA
RTTN
AP3S2
SMG8
STAT3
REXO4
BMS1
CDK5RAP1
HTR5A
ITGA4
TEFM
SNIP1
PPP6R1
KDM3A
INO80C
RNF187
EIF1AD
BANF1
SNAP47
TACO1
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
SCAND1
COPS7B
MRPL21
IGHMBP2
DRAP1
C11orf68
JMJD4
C3orf14
WDR74
PSMF1
KANSL3
ILF2
ATP5MC2
USP30
SNX17
EIF2B4
FAM207A
TTC26
TATDN3
NSL1
TRUB2
COQ4
TMEM222
RILP
NEMF
WDR11
SAR1B
WDR36
SLC29A2
DUS1L
ZBTB45
FAM133B
FGFBP3
ATR
ZNF571
ZNF540
NBN
ZNF391
TSEN15
MOB4
MRPL1
CCDC97
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
POLR3E
DPP9
GABPB2
SMG5
COPS4
SCNM1
LYSMD1
NOTCH2NLC
HSPE1-MOB4
HSPE1
HSPD1
KDM1A
TTI2
TMEM68
TGS1
NSA2
GFM2
CCNC
DDX18
WDR55
BNIP1
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
CTNNB1
RUVBL1
KIAA1549
SNRPB
NDUFAF1
ZSCAN25
CPPED1
SEC13
STAU1
MRPS23
MNAT1
POLG
NUP54
MAN2C1
C8orf37
TTC4
TPR
ODR4
NR1H3
ACP2
ZCCHC4
RMND1
ARMT1
TMEM101
CCNI
NDUFS3
KBTBD4
RPS20
ADPRS
MITD1
THAP11
MTBP
MRPL13
CHD1L
B4GALT7
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
NOP16
HIGD2A
PSRC1
EPRS1
GRPEL2
TPM1
BRF2
FAM228B
MED18
SNRPD1
CCAR2
ZNF609
TIPARP
TSFM
ING2
SDHAF3
PARP2
METTL9
ALKBH3
LOC102724265
SF3B6
SERPINB1
PIGW
MYO19
SLC39A13
HNRNPD
ADRM1
PHIP
CASC3
ZSCAN31
COPS2
HUS1
EIF3E
TPK1
PSMD3
SESN1
CRKL
NCBP3
NECAP2
SMU1
OPA1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
MRPL3
SNRPB2
RAB18
MLEC
TGFBR2
LRP6
ALG10
EXO5
PLEKHM3
N4BP2L2
RPL26L1
CLUAP1
FAM98B
GORASP2
AGK
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
INO80B
SACM1L
R3HCC1
CCDC88A
RBM45
ZSCAN30
SEC22B
AARS2
SNRPE
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
ANKRD40
RPL5
MRPS14
SMG7
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
RPS15
ANXA2
HAX1
PRIM2
LSM5
CLTB
SNRPD3
GUCD1
PDCD6IP
KMT2D
RNF6
SEC23B
PSMD6
BRWD1
DPP8
SUGT1
FAM234A
BANP
DDX1
GABPA
ATP5PF
VPS13B
C18orf21
CEP85L
CASS4
PPP2R5B
ZSCAN22
ZNF76
SMIM13
KRR1
ACTL8
U2SURP
NMNAT1
LZIC
PUS10
PEX13
MRPL16
C10orf88
NBPF1
CEP120
ITFG2
YTHDF2
PRKAB2
TRAM1
CDIPT
MAPK1IP1L
HLA-E
PRPSAP1
MRPL39
RNF125
NOXA1
ITGAL
NFAT5
RBM28
RPS3A
CBWD5
DHX16
ZZZ3
SRRM3
NOTCH2NLA
MRPS33
GSPT1
CCDC150
ERCC6L2
TBL1X
PTPN4
CYP17A1
SLC35B1
WWOX
PRMT5
ZNF165
NUP107
GLIPR1L2
ATG101
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
FBXO22
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
LRRC37A3
TMED1
SOD2
RALBP1
GNB2
HNRNPA1L2
DGKZ
GPAM
DNAJC11
SAE1
RABGGTA
STX6