ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BSDC1
PPIG
RABGAP1
PRAME
LUC7L2
FMC1-LUC7L2
FMC1
SAMD4B
ATP1A1
YTHDC2
TMEM41A
KCNJ15
SAE1
YPEL3
CCDC130
CBX1
PPIL2
ZNF562
TMEM43
CHCHD4
ST6GAL1
PRELID3B
SNIP1
LZTR1
RBBP5
AURKAIP1
ZFP30
ZNF623
NUP214
ITGB3BP
EFCAB7
TRUB2
COQ4
TOP3B
GFI1B
TSC1
FAAH
GTF2H4
DQX1
MRPL40
HIRA
NDUFS7
CRKL
TRMT2A
RANBP1
RBL1
JMJD1C
REEP3
FAM234A
MAPK1
CLK4
CEP85
POLR2J3
MARCHF2
SLC35E2A
TTC32
CDK19
AMD1
STAU1
RCCD1
ANKRD54
PCBP2
MED23
GP1BB
ZNF408
ARHGAP1
ARHGAP39
FEM1C
PIH1D2
NKAPD1
UBE2L3
RPL26L1
TNPO3
SMIM13
LOC102724265
UFD1
CDC45
COPS4
SSBP1
TMEM259
SF3A3
ZSCAN25
ADAR
SFSWAP
CCDC116
WASHC2C
KAT5
SEC22B
STX16
C9orf16
RNF187
EIF1AD
BANF1
PPM1F
FZD1
RPS29
PAFAH2
DNAJB12
MAPRE2
SUPT7L
SLC4A1AP
TTI2
GCFC2
MRPL36
NME1-NME2
NME1
THAP7
MAN2C1
SNRPE
GNB2
MRPL42
ZMPSTE24
ALDH3B1
NOS3
GRPEL2
ASCC2
SUPV3L1
TFPT
PRPF31
EIF2D
BAG6
PTPA
CRAT
SLC24A1
INTS14
GABPB2
WDR47
CCNI
TMEM242
SELENOH
CENPN
PGBD2
TRMT11
PRPF3
PLD3
C19orf47
SLC7A6
VAPB
CHAF1A
RGL2
PAXX
ZC3HC1
ZW10
POLE4
KCTD9
CDCA2
YWHAQ
DSTYK
PKMYT1
HLA-E
YPEL1
POLG
TPR
ODR4
AHCYL2
MED15
RERE
ZNF165
CRBN
PRIM2
FAM25E
SLC27A4
ZCCHC7
ACYP2
HSPBP1
RSRP1
ANKRD36C
CMIP
UTP3
AARS2
RPS15
GPR3
ZNF74
SMU1
CDIPT
ZNF529
ZNF554
C7orf25
TSNAX
TMEM191B
NUF2
REXO4
PPP6R1
PLK3
EIF1B
APRT
DNAJC14
NFYC
RPS7
VTA1
NMBR
HUS1
FGFRL1
MMGT1
RPS26
TOR1A
NUP205
OGDH
GSTA4
TMEM216
ABCB8
LMNB2
GAGE2C
GAGE2B
GAGE2A
TUBAL3
ZNF436
SEC24C
MAGOH
PARK7
P2RX6
FAM220A
ZNF280A
N4BP2L2
LMAN2
MED24
FAM160B2
SDF2L1
CCDC88A
QRICH1
NDUFA6
CNTRL
IREB2
C5
SPRING1
RNFT2
WDR43
FAM207A
ATAD2
LTN1
KCNH1
CEP164
ZSCAN21
PAXBP1
BAIAP2
RABIF
RNF216
SYS1
FRG1
GOSR2
MST1
ZNF282
TMEM219
CCDC59
RBBP9
KDM3A
RBM28
CYB561D1
RIF1
HNRNPH1
PRKCSH
CCDC151
CCDC12
SUGCT
MPLKIP
SERPINB1
PPP6R3
ZNF808
CWC22
INO80C
INO80B
PDCD6IP
ZNF3
DHX8
NDUFA11
VMAC
VAC14
SMARCD2
GDPD5
ZBTB6
GBA
KLHL20
NECAP2
TMEM128
DHX40
DCAF10
SLC44A1
MTR
BANP
ZNF585A
THOC3
DISP3
ACOX3
TRMT44
BMS1
DPH7
SNAP29
PI4KA
SRP19
MAP2K1
NR2C2AP
IPO4
SMG8
WWOX
SAYSD1
PFDN5
TCAIM
RPL37
TMEM222
MRPS15
MARCHF7
VPS52
RPS18
TCTEX1D4
BTBD19
CNPY3
DGCR8
HIC2
TMEM101
DHX16
IBA57
UFSP2
PRKCI
NEU1
PSMC3
MRPS18C
HELQ
TPM1
LRP6
ZNF268
TMCC3
VARS1
LYRM2
CHMP4B
AASDH
ZNF212
RNF146
DBF4B
CAMK2G
PKD1
DTX4
VPS13B
TRIM5
KIF15
KIAA1143
POC1B-GALNT4
PHF12
AGBL3
KLHL18
KIF9
DYNC2I2
KRTCAP3
DMAP1
RBIS
PPP1R8
LEMD2
EEF2K
SPATC1L
FAM20B
PLEKHG2
H6PD
FNDC3A
RAB3GAP2
GTF2H5
NDUFAF1
DCLRE1B
AP4B1
IPO13
TMBIM1
ZNF398
PPOX
RBM48
PEX1
SEC61A2
ZNF425
SPACA9
AK8
TSC2
NTHL1
AXDND1
ZNF714
CRTC1
CASS4
PRPSAP1
DDX27
YJU2
N6AMT1
CACTIN
RRP9
PARP3
AK2
TP53I3
ZNF649
CDK5RAP1
ZNF391
NDUFS3
KBTBD4
C12orf73
VWA7
TFEB
ZDHHC12
TANGO2
ZNF561
ZSCAN22
BRPF1
TSSC4
DTWD2
TBCB
POLR2I
MRPS33
C19orf48
NOL8
CENPP
RBM45
WDR70
CCDC124
TIMM50
PDE4A
CHMP4C
STX4
CCNL2
ADPRS
MITD1
HMGN4
PDCL3
SH2B1
LEO1
ZNF558
EIF3F
NSUN4
TARBP2
PMS2
AIMP2
CGB2
TRIP4
DPY19L4
POLR3B
SNAP47
JMJD4
SMG5
INTS4
MEGF8
HDAC1
ARNT
CCDC83
RPL27
SACM1L
MMACHC
CCDC163
FUT10
PMF1-BGLAP
PMF1
OR8G2P
TNXB
MRPL44
ZBTB40
TIPARP
KRR1
TAS1R1
NOL9
ZRANB2
BLOC1S5
TAF1C
SNX15
DLD
SKP2
LMBRD2
SLC25A16
MCOLN1
COMMD4
TENT2
BBS1
DDX50
DGAT1
RTL10
GNB1L
WDR4
ZNF426
SMG7
PPIH
RBSN
PRMT3
SPIDR
B3GALNT2
WNT11
NBN
MED18
PPP5D1
CALM3
DIDO1
GID8
NBEAL2
NRBF2
BUB1B
ZNF684
FAM13A
STAM2
HK1
SPPL3
VPS33A
ASB6
RNF121
LOC100133315
CSTF2T
ZNF180
TTC39A
RPAP1
RPS10-NUDT3
RPS10
CCAR2
TMED1
PSMB7
STAT6
RPA2
ZNF566
UBQLN4
LAMTOR2
ZNF221
MAP2K7
CCS
CCDC87
RFX1
RRP15
ZNF805
S100A13
GNL3L
ERMAP
CHTOP
RNPS1
R3HCC1
CBWD5
ZNF846
CBWD3
C2CD5
TCAF2
ZNF26
TM2D1
NUP133
EFTUD2
CCDC103
PDAP1
BUD31
H2BU1
H2AW
METTL6
EAF1
TTC31
CCDC142
E2F6
MRNIP
MEF2A
SEC11A
SCAP
MAP11
WDR13
NTPCR
CASC3
TTC21B
PCTP
RIPK1
MADCAM1
ADRM1
TIGD1
EIF4E2
TM9SF4
MTLN
RPF1
CFAP36
UQCRQ
GDF9
PPP2R3B
OSBPL7
TMCC2
LTA4H
MEIG1
CSRNP2
C19orf53
ZNF487
SPOCD1
SLC25A1
ATP5MC2
SEC13
AGK
ZNF510
RSPH3
DAXX
HNRNPF
CDK7
DDX39B
SCAND1
ZBTB45
DPP9
CCNC
INKA2
DDX20
FAM168A
MICOS13
HSD11B1L
ZNF565
ZNF146
BCAS2
PEX3
ADAT2
CPPED1
SLC35B1
DHTKD1
SRFBP1
PTCD1
CPSF4
SEM1
SIRT5
CHFR
MTF2
DCP1A
RPS14
WDR55
SLC39A13
MTOR
COG2
SMIM12
TCTE3
ERMARD
SSNA1
ANAPC2
PNO1
PXMP4
GTF2H2
GTF2H2C
TOR1AIP1
ILF2
ATR
CDK12
ANKRD36
GFM1
THUMPD3
WDR62
THAP8
CPT2
MED16
TIMM13
THEM6
ZNF442
TBC1D19
SLC29A2
BRF2
SREK1IP1
CWC27
METTL26
CCDC174
PSMA1
ZNF383
HIKESHI
KXD1
AKR1A1
PPIP5K2
GIN1
NBPF1
SIRT4
ZZEF1
CYB5D2
SIKE1
ZNF576
IRGQ
IFI6
RABGEF1
POM121
ADO
RAB8A
FAM228B
SF3B6
NIP7
COG8
RRP1B
HSF2BP
SNRNP35
NAPA
ATP5MF-PTCD1
ATP5MF
SAR1A
HACE1
ZNF546
SGO1
GORAB
SEPTIN5
GRIPAP1
SLC35A3
PLEKHM3
CYREN
DHDDS
ACVR1
ABCC10
ABCF3
MMUT
CENPQ
IL18R1
BLOC1S1
GEMIN6
TENT5B
NR1H3
ACP2
TMEM167B
POLR3A
DR1
DFFB
CEP104
ITSN1
CRYZL1
TIMELESS
MRPL16
ATG101
ATG4C
CHCHD2
NUDT5
CDC123
CALCOCO1
UNKL
ALKBH7
INTS12
GSTCD
TTC4
TNFAIP8L1
CDK11A
CAMLG
RPL10A
CYB5B
TRMT10A
MTTP
HAUS5
SMIM30
SRP9
ABCA3
CLPB
EEF1AKNMT
GPATCH3
ZNF300
NUFIP2
ELAPOR2
XKR9
LACTB2
WFDC3
DNTTIP1
GTF2H2C_2
CIZ1
UBE2Q1
POLR1H
PDSS2
MUC1
MRPL27
EME1
ZNF197
EXOSC9
STRIP1
USP47
RPL36
BCL2L1
DNM1
DNAJC28
SPATA24
YBEY
MCM3AP
MRPL38
DNAJC16
CCDC90B
MVB12A
CD2BP2
GDPD1
USE1
NDUFB2
RAC1
SH3BGRL2
LCMT2
ADAL
SLC25A51
C8orf37
HAX1
PUS10
PEX13
MED4
PPP1R11
STK40
ZNF354A
DYNC1I2
BRAP
ACAD10
SKIV2L
NELFE
ABCF2
ZNF140
SCN9A
CDON
FAM200A
RAB11B
FUT1
DPP8
RSAD1
CCZ1B
SNX3
FAM3C
TOR2A
DAB2
ZNF92
ZNF200
MUL1
TEX15
CFAP298-TCP10L
CFAP298
EPRS1
GORASP2
SNX19
MRPL45
HLCS
METTL2B
MAN2A2
EGLN2
GTPBP3
SCNM1
LYSMD1
RALBP1
TMEM208
LRRC29
RETSAT
DHPS
CBLL1
SLC35B4
PSMC4
FASTKD1
SIRT2
NFKBIB
PNPLA8
TYK2
PEF1
TEFM
POLR3E
SASS6
MRPL54
APBA3
TMEM39B
KPNB1
SMIM20
IMMP2L
IFRD1
FUS
ECH1
ZNF628
WRAP73
GPR35
U2SURP
ATP5MC3
NR1H2
MRPL24
TTC37
ARSK
EIF3G
SUPT3H
DHX33
NUTM1
NOP10
TLE2
HOMER1
RPL23
HSPH1
TATDN2
STK19
DXO
FAM149B1
ECD
ACTR3C
SYVN1
TEAD1
NPFFR2
GP6
MRPL1
CHMP7
FANCD2
POT1
HAGH
FAHD1
SCRN3
CIR1
VIRMA
GSPT1
TOMM20
DNAJB4
PMVK
SLC25A19
NUDT13
ASAH2B
TIGD4
ARFIP1
PRRC2C
RBKS
BABAM2
RCAN1
RFXANK
BORCS8
DUS3L
UBP1
TMEM144
DHX37
CDC73
MRPS14
PPP6C
ZSCAN12
UBE3B
TINF2
RTEL1
TAF11
DARS2
CENPL
IDH3B
ZNF263
RIOK2
SRD5A3
PRR5
BLCAP
MGA
RNF113A
NDUFA1
ZSCAN30
NMNAT1
LZIC
ARL14EP
SERBP1
LRIG2
GPR137
CENPF
PCYT1A
CUL7
CXorf58
USP36
TOR1B
RABEP2
EIF4EBP1
PDE11A
RUVBL1
RPL5
PPIL1
SDAD1
H4C3
C21orf58
SCN11A
OR2L13
FBXO8
CEP44
WDR48
PRR19
PAFAH1B3
SMIM14
KTI12
SYF2
PAF1
VPS37B
GCK
ERCC6L2
SPHK2
RPL18
KLHDC10
OAZ3
MRPL9
SNRPC
EXOG
SLC9A8
NUP107
ARL8B
BCKDHB
ADPRHL1
CTU1
LSM2
PTK2B
TRIM35
ZC3H18
RPP38
SND1
SLC66A1
AKR7A2
CHD1L
PRKAB2
RAB5C
HDAC2
TADA1
CCNT1
ABHD16A
KYAT1
GRWD1
RBM34
THADA
ZNF655
UQCC2
SPAG5
KMO
FAM227B
DTWD1
RAB30
EIF2B3
ATP6V0D1
PAK1IP1
C6orf52
FYCO1
DHX30
RHOT1
MFAP3
FAM114A2
NCBP2AS2
NCBP2
RFX2
DDX21
TAP1
PSMB9
GATAD1
LSM14B