ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
SUPT7L
SLC4A1AP
ATF7IP
KDM3A
ZNF408
ARHGAP1
GABPB2
RCAN1
RPL27
COL4A6
COL4A5
MTRNR2L2
SF3A3
COX16
SMG5
CDIPT
MMACHC
CCDC163
PPP6R1
COPS4
NDUFB3
FAM126B
PIH1D2
NKAPD1
RBBP5
HDAC8
NME1-NME2
NME1
AURKAIP1
COX7A2
PRPSAP1
INTS5
MTF2
RPS26
TUT1
LY6K
DNAJC16
RABGAP1
KDM5C
MED18
EIF2S1
ATP6V1D
TBL1X
RPS7
CLPTM1
CALCRL
SMG8
SLC33A1
ARHGAP39
STAT3
AHCYL1
PAXBP1
SELENOH
STC1
INO80B
CCNI
RGPD1
RGPD2
ITFG2
SLFN12
CDK12
HAX1
ZNF226
RFFL
TCTEX1D4
BTBD19
DHX16
AIFM1
DUSP6
ZNF571
ZNF540
WDR83OS
WDR83
GPC6
KDM1A
UBB
RMND1
ARMT1
SSBP1
EIF3F
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ARMCX5-GPRASP2
ARMCX5
CELF1
PSMB7
ABRACL
IFTAP
GTF2H4
ZMPSTE24
UTP3
ISY1-RAB43
ISY1
STK40
CCDC174
MTBP
MRPL13
PPIL3
NIF3L1
ILF2
LRIG2
RCAN2
RPH3AL
NOL12
ALG14
ZNF331
AP1G1
RNF125
REXO4
PACSIN2
UQCRC2
C1orf174
KAZN
MICALL1
GBA
YWHAQ
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
PPRC1
TRIM5
RAD51AP1
C12orf4
ZW10
RPA2
IL17F
ZNF56
EIF5A
DNAJC25-GNG10
DNAJC25
ZNF790
TRUB2
COQ4
MRPS23
EFHD1
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DDX41
PIKFYVE
FAM124B
FAAP20
CSNK1E
ZBTB25
ZNF165
NEMF
TRMO
YPEL3
TMEM242
SLC25A53
RPL38
FRRS1
MITD1
UFC1
TFPT
PRPF31
LSG1
RNF207
ARMC1
RPL11
TBC1D19
SIN3B
BNIP1
TIMM10
SCARB1
MED11
B4GALT3
PDE12
TNPO3
UBE3B
IFI6
GTF3C3
MAST2
RABGAP1L
LRP6
HEATR1
PES1
TM2D1
PSMD3
KANSL3
C3AR1
TOMM40
CASP10
VPS52
RPS18
NEK2
ZRANB2
ADRA1A
TEFM
SLC35B1
POLR3A
HEMK1
RERE
RUVBL1
PCNP
RAB30
RBM25
PLK3
PEX3
ADAT2
SNX17
EIF2B4
ATP5MC2
ZNF461
SULT1C2
UFD1
CDC45
DPP9
TTI2
TIMM22
VPS35L
EIF3E
AASDH
AAAS
NOL8
CENPP
COIL
SLC39A9
ERH
GPATCH3
PAFAH2
SPHK2
RPL18
SNRPB
NR1H3
ACP2
CEP120
SMIM12
ZNF335
CLASP2
ZNF510
NEURL4
IPO4
ZBTB45
EPRS1
TTC14
TBC1D9
MTR
ZNF585A
DDX42
CCDC47
PHF5A
ACO2
CCNC
SNRPD1
CHMP7
INKA2
DDX20
SESN1
CEP57L1
DDX18
ANKRD13C
FBXW7
YJU2
ZNF221
AKR1A1
CCDC97
TRAPPC8
PIGL
MDM4
CDK5RAP1
TMEM259
GTF2B
PREPL
CAMKMT
CMSS1
KCTD20
DMAP1
TIMM9
KIAA0586
GYPC
ALG10B
DHX8
PDSS2
FRA10AC1
DYNLRB2
EFCAB14
LURAP1
JMJD1C
COMMD2
MAN1C1
CREM
ZNF484
SLITRK5
MRPS15
IPO13
DBF4B
ZNF793
MED23
PPIH
USO1
FAF1
CLN3
TTC32
POLR1H
ZNF260
ZBTB40
POLG
RBL1
ZNF2
ZSCAN4
SEC16B
NUF2
NBPF1
FDXACB1
C11orf1
SRSF1
TUFT1
KIAA0319
ATG4C
DNAJB4
KAT7
FUBP1
SLC1A3
CCDC59
KDM8
ANKRD17
MOB4
UQCRH
LRRC41
GLIPR1L2
SH2D5
TMEM128
GALM
MNAT1
BANP
SMARCD1
LYPLA2
DMAC2
KIF2C
SF3B5
TM9SF4
RPL26
CCDC107
ZNF806
INTS4
C19orf48
LIMA1
MRPL1
KRR1
BAIAP2
MED16
ACBD4
EIF3D
CZIB
PSMB6
RTTN
INTS2
DNM2
LACTBL1
PCBP2
C11orf49
NR1H2
CSTF2T
SH2B1
SCP2
ZNF302
IRF9
NCOA7
CDK19
AMD1
RFXANK
BORCS8
SF3A1
CCDC157
HIRIP3
RPL37A
MRPS33
PRRG2
NOSIP
GOSR1
OAZ3
MRPL9
PSMD9
HPD
CCDC130
TTLL12
SNIP1
UIMC1
PDE7B
OSBPL8
ZNHIT3
CALCB
SUGCT
MPLKIP
ARL14EP
MVB12A
ZBTB8OS
RBBP4
TIMM50
NRDE2
SREK1IP1
CWC27
PHB2
CDC5L
TNFAIP1
IFT20
PEAK1
HMG20A
INSYN2B
SUGP1
MAU2
CYB561D1
POC1B-GALNT4
NME7
BLZF1
CHST4
NSA2
GFM2
RSPH3
ZNF791
ZNF490
ZNF613
WDPCP
MDH1
USF1
ZMYM6
WDR55
PRKCI
CORO2A
WDR11
NOP16
HIGD2A
CRADD
MRPS18C
HELQ
BRF2
AAR2
SCYL3
UBQLN1
COASY
SOD2
WTAP
AJUBA
INO80C
TMED1
TYSND1
S100A13
S100A1
WDR36
UTP11
ZNF48
WASF2
ZSCAN30
DCT
SLC39A6
NRL
DCAF11
SLC35A4
APBB3
HAUS4
CD2BP2
RUFY3
CES3
SLC25A44
TMEM30A
ZNF570
ZNF569
BORCS7
CEP162
STARD10
BPNT1
CAND1
QRICH1
SIRT4
TCIM
C8orf37
LSM5
ATP5MC3
CYB5R4
UBQLN4
LAMTOR2
GPX1
LMNTD1
SCNM1
LYSMD1
CNPY2
CPN2
RCC1
SLC7A11
MBNL2
SEPHS2
TBX18
LTA4H
NEK4
TRMT1
ADPRS
TMBIM1
ZNF350
STAT6
SNX12
CCNT1
ACTR6
ABCD2
MTRNR2L10
MRPL48
GABPA
ATP5PF
TBC1D22A
PSMD8
XPNPEP3
ST13
TPGS1
GABARAPL1
SRRM1
ARHGEF10L
TSFM
RIF1
CGGBP1
CALM2
C3orf38
MRPL54
APBA3
RC3H2
KIF20A
BRD8
SIRT3
PSMD13
CFAP298-TCP10L
CFAP298
NUP54
ZKSCAN2
GOSR2
HBS1L
GPN3
FAM216A
TRMT11
WDR5B
SLC35E2A
TPK1
FNTB
ETFBKMT
HACD2
PLEKHG2
MRPL45
PRKCSH
CCDC151
ATAD5
FGD4
PMF1-BGLAP
PMF1
NHS
RAI14
NECAP2
TAF15
NECAP1
ZNF300
PLPP5
ENDOV
PSME3
FAM13A
RPL22
ZNF566
ZNF573
MSANTD3
DSTYK
ZSCAN22
DDX46
HAUS6
RPS29
ZFC3H1
THAP2
FOXO3B
GCNT2
POLR2J3
SLC30A6
ADGRL1
SLC35F2
RPAIN
NUP88
COPS7A
MZT1
BORA
TTC39A
HTR3A
GORASP2
HEXIM1
EIF4A2
KXD1
AP3S2
DNAJC11
LZTR1
UBR2
TAF13
FCRLA
C4orf51
GSTA4
EIF1AD
BANF1
SRFBP1
GNAL
NOLC1
ARHGAP24
C2CD5
TMEM208
LRRC29
CUL2
SNU13
TBCB
POLR2I
DYNC1I2
CACTIN
TXN2
AARSD1
RUFY4
C6orf118
SULT2A1
TATDN3
NSL1
ZNF391
RWDD1
PLS1
TXNDC17
KIAA0753
NXT2
DRG2
GTF3C5
SFSWAP
TTC5
SRP54
CREBL2
SLC35A1
GTPBP2
TTC31
CCDC142
CUL3
POGLUT3
FUCA1
SLC35E4
CDRT1
ZFP30
SMG7
SLC18B1
MEGF8
NOL11
CCNG2
UTP25
SIAH1
PUS10
PEX13
THOC5
YARS2
ACBD5
CLCN3
DNAL1
RTCB
YLPM1
DYNC2I2
RBM8A
ELSPBP1
NIP7
COG8
SRSF4
PHF12
TIPRL
NOCT
PIP4P1
TBC1D1
LUC7L2
FMC1-LUC7L2
FMC1
RPS12
PNISR
RPS27A
CLHC1
TRMT112
PRDX5
RRBP1
OBSL1
INHA
NPAS4
CCDC90B
CMPK1
MAP3K7
POC5
MPDU1
LOC100996842
CD320
SULT1C4
SNRPG
CEP85L
U2SURP
DEDD
SPIDR
BCL2L13
ARHGAP9
MARS1
ATP2C1
CACYBP
SLC35D1
GPRC5A
HMGB1
USPL1
GALK2
COPS2
RPS3A
TAS1R1
NOL9
THRAP3
AMPD3
ABCF2
LRP10
PRSS23
FAM228B
SF3B6
MTOR
UBOX5
FASTKD5
ZNF180
ELAC2
ZNF416
NSUN3
DHFR2
GTSE1
ERAL1
ORAI3
FIG4
AK9
PIK3CB
DHRS13
ZNF286A
OSGEPL1
PRCC
CLASP1
GABARAP
MTREX
DHX29
IFIT3
CALHM5
F2RL2
ZNF623
RPL29
CCDC43
PPIG
ZNF829
ZNF568
RBM45
YTHDF2
SENP1
PFKM
GPR137
NGDN
ACVR1
CHD8
MRPL27
EME1
USP9X
PSMB5
SEMA5B
NKX3-2
HOXB13
PRPF18
NSUN4
POLDIP3
CENPF
STRIP1
ACP3
OS9
CLUAP1
TRMT5
SLC38A6
DCP1B
FKBP8
CCAR2
CFAP20
UROD
TRIM46
KRTCAP2
TENT2
APOL2
HECTD3
EYA3
DCLRE1C
ZFYVE26
TMBIM6
SNX3
ACSL1
GRWD1
RBMS3
PEF1
PKDCC
SCAND1
UBE2Q1
ATP6V0D1
PUM3
ANXA11
EFTUD2
CCDC103
AP2S1
MGRN1
TMX1
GRN
NDUFS7
COPS7B
CLTC
ERLIN1
MRM3
GLOD4
PDE6D
STX12
TSR1
SGSM2
FLRT3
TMEM102
CPPED1
C18orf21
TNFRSF19
VIRMA
NUP107
ZNF529
RNF220
PCNX3
ADIPOR1
COA3
CNTD1
FNIP2
MAP3K11
WDR74
COA6
MPHOSPH10
MCEE
BAG6
PMVK
POLD4
HSPE1-MOB4
HSPE1
HSPD1
MAN2C1
CRKL
NKAP
SBNO1
ZNF700
ILF3
NUP35
FAM135A
CHM
KLKB1
TACO1
SNRPD3
GUCD1
ATG101
TMEM167B
RANBP2
RGL2
CABIN1
ZNF565
ZNF146
MTIF2
SDHAF3
FAM234A
MRPL19
SPAG9
SH2D3C
PNO1
AGPAT4
UBE2I
ING4
LIN54
MEIG1
IWS1
MRPS10
DNAJA3
CSRNP3
THAP3
RHOT1
MRPL24
DYRK4
TAF12
CRNKL1
CFAP61
ACTR1A
SUFU
ZSCAN23
SH3BP4
SLC39A11
RAB3GAP2
ISG20
PAK1IP1
C6orf52
SLITRK1
ZDHHC12
PHIP
RPL5
TOMM22
BCKDHB
NAA38
SUPV3L1
CYB5D1
NDUFA9
AKAP3
LOC644090
ARL14EPL
SNAP47
JMJD4
BAZ2A
ZNF582
ZNF24
CARS1
SPR
GRIPAP1
KLK10
MAGOH
PSMA1
METTL18
C1orf112
LMAN2
RANGAP1
TMEM69
MAD2L1BP
UBE2Z
FAM199X
RFC1
CDK7
MFN2
DLAT
SYCP2L
CSNK2A1
SULF1
VPS13B
MED24
PDK2
ARL17B
ARL17A
RIOK2
GMEB1
TMEM63C
TRIP4
ADRM1
HLA-E
PDCD6
NAPA
SLC35A5
ATG3
MORC3
C19orf25
C11orf65
TRIM23
TRAPPC13
SHLD3
PYROXD2
RPL18A
RNF121
LOC100133315
EXOSC5
BCKDHA
MPC2
DCAF6
CELF3
AARS2
RPTOR
PPOX
HIBCH
NUP205
TRIM2
BRCA1
FASTKD2
RPS27
SARS1
NCLN
N4BP2L2
PARK7
ZBTB20
ATP6V0E2
TAF11
MBNL1
CACHD1
ANKS1A
ADGRF2
RPS14
MDC1
BTRC
PPIL2
ZNF14
CTH
INPP4B
ALDOA
OXA1L
SZRD1
PRR13
EPHA7
PARP2
RPS19
TTC21B
VPS45
SLC35E2B
MRTO4