ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220466 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◣ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUSP6
MMP7
IST1
GDPGP1
CIB1
CEP72
RILP
CBX1
TTC13
ATP1A1
KCNJ15
DMPK
PTHLH
BMT2
SDCCAG8
CEP170
NDUFB3
FAM126B
BCAR3
LCN2
RNF187
ZNF562
LIPA
MIGA1
LAT2
SLC12A7
PDE11A
OTUD7A
TMEM70
PUM1
ZNF609
CUEDC1
TBC1D22A
NDFIP1
PI4K2A
FMN1
PDXDC1
FAAH
MAML1
PRELID3B
TPM1
ANXA2R
CEBPB
SP4
SPAAR
FAM83A
IKZF3
RXRA
SFT2D3
TSC22D2
SDC4
NAA20
ADD3
CLK4
KRT8
SAMD4B
GOLIM4
BSDC1
RERE
SH2D3C
CCN5
DUSP22
RABGAP1
IL18
BAIAP2
PRKAR1B
BHLHE40
PRKD2
RAB30
RABGAP1L
ITGA3
MKNK1
MTMR6
RBBP9
WDR74
NBL1
ZNF233
NOS3
JMJD1C
REEP3
YKT6
RNF13
PLA2G10
PSRC1
YTHDC2
NBN
GRPEL1
MST1L
KIAA1841
CD47
HLA-DMA
KLK11
MAPRE2
RFX7
OR9A4
TMEM41A
ZNF226
YTHDF1
POF1B
SIPA1
YES1
VIL1
ANKRD22
MEX3C
TPSG1
PNRC2
TMEM59
TOLLIP
ZHX1-C8orf76
ZHX1
TRAM2
ZNF28
PIGW
MYO19
GJC2
MLLT6
WDR43
LXN
COL18A1
TET3
TMEM44
DAB1
OMA1
ZFP91
LPXN
RAVER2
CCDC130
CAMK2D
GOLPH3L
PCNX3
ARHGEF2
TRIM29
PRRC1
SYT8
ECI1
LAMA3
ACYP2
ATP2C2
MEIS2
SGPP2
HMGA1
ASS1
NPAS4
CIZ1
MRPL45
RAD51D
ZBTB49
LYAR
PPP1R9A
PPP6R1
C3orf14
PELATON
CYRIB
SH3BGRL2
P3H4
OGFOD1
NUDT21
STPG1
NIPAL3
HNRNPD
ZZZ3
HEXIM1
BIRC3
RPL24
FGFRL1
SPINT2
UGCG
NDRG1
SLC25A51
CHD1L
RAB26
SPACA6
PAAF1
COA4
VWA7
BCL9L
FGFBP3
WAC
ZNF280D
TARS1
CATSPERG
HIBADH
LRRD1
EPS8L1
LUC7L2
FMC1-LUC7L2
FMC1
HNRNPH1
C1QTNF9
LOC101927572
ALKBH6
SSR3
SEC23B
NOTCH2NLC
GDPD5
IMPA2
ANO10
SRF
STYK1
RNF39
MTBP
MRPL13
PIP4P2
BCAS1
RAB1A
QRICH1
ZCRB1
PPHLN1
EHD4
TCERG1
SLC1A5
DHDH
PIK3C2B
MPZL2
INTS5
ZSCAN25
METTL8
DCAF17
WDFY2
OSBP
SDR16C5
TUFT1
YPEL3
RMND5A
RNF103-CHMP3
ARL6
HMGB1
USPL1
HES3
LHX4
RPS7
PGAP2
MANF
ERAP1
PPP1R8
SEMA4B
LRP5
CMPK2
ZNF805
RAPGEFL1
TTC4
PIK3R1
PPA1
ZNF112
PLPPR2
RIPK3
CDK19
AMD1
ELK1
COQ2
RGL2
ZNF292
MSL2
PIGF
CRIPT
ZNF652
SPTSSB
ZNF44
TBCE
RNF144A
LRRC66
COMMD4
ANK3
SERBP1
ABCC10
NKPD1
FAM227B
DTWD1
KLK12
TATDN1
NDUFB9
ZC3H10
ROPN1
SLC29A2
LNPEP
PCTP
DCTN4
PLD1
RNFT1
MICAL3
RINL
ADPRHL1
ATAD2
NOL11
AGBL2
NABP1
VAPB
TIMM23
SHOC2
BBIP1
RBBP5
SMARCD2
YARS2
OGDH
MBNL2
ARHGDIB
CEACAM19
SAE1
PPME1
C2CD3
TEF
GPR39
MRPL44
EGR2
HSD17B12
MAP3K3
SNAP47
ING2
CBFA2T2
ORC4
MBD5
KDSR
NUDT7
TCEAL1
SLC30A6
GPR37
TTBK2
PTGES
TMTC2
FBXO46
RPL27
TMEM179B
HOXB5
CCDC150
BRPF1
HBP1
PPP2R3A
THAP11
GRPEL2
STK40
PLD3
C19orf47
PRR15L
SLC35A3
ZNF670
BMF
BTBD8
PSMB8
PBX1
BTD
HACL1
CDK4
DIRAS2
STAU1
VIRMA
DDX27
SLC25A40
DBF4
TP53I3
PDE5A
HEBP1
JADE1
MTNR1A
ZCCHC4
ATP5MPL
TES
CNGB1
METAP1
TPP1
CMTM4
CTNNB1
MTF2
VRK2
MTPN
LUZP6
MED30
NOXO1
ALG10
SNX18
OGA
MYCBP2
PTK6
NUF2
EIF2D
POLE4
MAPK1IP1L
SMIM12
RBM7
C11orf71
PHF12
PDK3
PCF11
FZD4
SLC5A1
ZNF587B
COMMD2
DCP1B
IBA57
JOSD2
APC
WASHC5
NSMCE2
SSBP1
SF3A3
GORASP2
MEGF8
PLEKHB1
LEPROT
LEPR
TRIM3
MOB2
CRKL
TAF10
PARP16
ZFYVE28
CFAP99
EVPL
RSL24D1
TMEM216
MECR
AMER1
FAM110A
UBE2D3
CEP41
SLC37A2
TXNL4B
DHX38
IKBKE
TRIB1
DOCK1
HIBCH
ZNF234
FAU
TMA7
CCDC51
SEMA3E
GBA
DNAJC25-GNG10
DNAJC25
TRMT5
SLC38A6
WDR5B
TTC39A
SSH3
ZMPSTE24
SLC24A1
INTS14
SDCBP2
GCA
GPR89B
FMR1
RASA3
HIKESHI
RAD50
TNFRSF11B
COLEC10
TRAM1
TAF1A
TGFB1
LIMK1
ATP6V0A4
PLEKHG6
BGLAP
STRADA
ACTR3
NCEH1
ARHGAP24
RAC2
SH3YL1
ACP1
LRATD2
EPS8
CREM
PYROXD2
PNPLA8
SESN1
MAGOH
CEP57L1
PPP2R5B
TARS3
TNFAIP8
RPSA
MARK2
METTL21A
TMEM43
CHCHD4
TIPARP
RTN4
CAPS2
CCR7
E2F6
NCK1
TESK2
AP3S2
ARL4A
TBC1D23
CASP3
GDF5
CEP250
SCYL2
DEPDC4
PHLDB2
PROCR
ENKUR
DSTYK
MYG1
MRPS28
CBR1
ABLIM1
PRMT3
CNTRL
MTHFD2L
NEGR1
PTCD3
POLR1A
SOD3
YAP1
GSN
C1orf56
DHTKD1
ZNF219
KLHL7
GTF2H2
GTF2H2C
RHOT1
DIDO1
GID8
ELF1
WBP4
STARD4
CNP
SLC16A3
DNASE1L1
NMRAL1
HMOX2
MAD2L1BP
MRPL34
GTPBP2
UBXN6
RBFOX2
CASZ1
FAM133B
TRMT2A
RANBP1
PPP1R11
SPAG4
KSR2
TTC9C
HNRNPUL2
ZFAND1
PPIP5K2
GIN1
MRPL16
THOC5
RNF144B
TMX4
SGMS2
INTS12
GSTCD
SCYL3
DDX11
MAP3K14
USP54
TBCEL-TECTA
TBCEL
B2M
TFE3
NCAPG
LENG8
CTTNBP2NL
TNNI3
RPS14
IQCH
AAGAB
GTDC1
ZNF337
RNF24
PRKCG
GALNT12
PLEC
ZNF865
DENND3
TMEM265
TMEM65
FIS1
SYPL1
SLC4A2
TMEM60
PHTF2
C19orf12
PGM1
CDK5
COA7
B3GAT3
SPICE1
LOXL4
IQCF1
GABPA
ATP5PF
RPS19
STAT1
DHPS
LYPLA2
METTL3
CTDSPL2
TMEM131L
F2RL1
SERPINA1
STX16
TPR
ODR4
TBX3
AURKAIP1
UTP3
TUT1
OARD1
NFYA
SNRPE
CDC25C
SLC25A13
TMEM229A
SAMHD1
IL4I1
ACSS1
YWHAB
CCPG1
C15orf65
CA2
C11orf24
CYP3A5
SPATA12
ILDR1
CSF2
INSL4
FEM1C
MRPL3
OSGEPL1
UQCC1
IL1RAP
RAB10
MESP1
BCL6
DUOXA1
ITGB3BP
EFCAB7
C17orf75
TSC22D4
TCAF2
INTS6L
ATP1B1
MED4
TM9SF4
PSMD11
ZNF416
CRY2
ZNF155
FAM13A
CDYL
KIF20A
BRD8
SERPINI1
PDCD10
PLPP1
RASSF6
ZNF527
FBXO11
ZNF765-ZNF761
ZNF765
MT1X
SPATA33
DERL1
POLN
HAUS3
UBE2L5
PRRT1B
LNX1
ZNF561
GPAM
GFM1
PSMG1
SLC9B1
ZNF324B
HAX1
CDIN1
TMEM45A
TEC
LAMB3
SACM1L
FBXO22
CHMP4C
DNAJC27
DCTN1
ADRM1
SNRPB2
INTS4
NVL
THUMPD3
KIFAP3
ZSCAN26
UTP23
PER3
LAMC2
ARHGEF38
WDR55
MRPL48
ZMYM5
MGST3
MAPK1
ANTXR2
NPAT
ATM
CAPRIN2
MTHFR
CLCN6
MESD
NPNT
GRB7
SLC33A1
FAM234A
LPCAT4
KPNA4
EMSY
STPG2
UBE2A
CEP97
ZCCHC10
COX6B2
MTIF2
ASNS
TTLL5
ERG28
ABT1
GPAT3
MET
RNF19A
PKM
SPTLC2
ZNF223
DCP1A
KLHL20
TLR5
IL15
SLC39A1
DCAF10
COPS7B
RPL26L1
ZNF684
UBN2
PUM2
CSTF3
NPM1
UPP1
IKBKG
HPGD
TMEM184A
KPNA7
NEK4
ADNP
CEP164
ETFBKMT
B3GLCT
DSCC1
SLC52A3
SLC44A1
FRG1
TMBIM6
POLDIP3
ADAM22
ZNF56
KYAT1
OTULIN
LRRC8A
RPL22L1
UBXN7
SLC35A5
ATG3
P2RY1
TMEM19
WIPI2
GOT2
SASS6
DROSHA
C5orf22
SEPTIN7
FSIP1
EIF3F
SLC25A28
DGKD
CD46
ROPN1B
CCDC7
RABEP2
PPIC
MAL2
HSPE1-MOB4
HSPE1
HSPD1
SF3B2
PNRC1
FLRT3
FXR1
MRPL40
HIRA
PDCD2
RABIF
DISC1
HSPA8
LMTK2
METTL15
KIF18A
ADAM10
CCNI
KRR1
MRPL38
CNOT6
CHCHD6
CORO2B
STRA6
IFIH1
SSTR5
DEF6
SCRIB
SGPL1
SLC35C2
RMDN1
WDR62
THAP8
ETNK1
AFF1
OAS2
C5orf63
SP2
CAPG
ATP13A4
GALK2
CYB561D1
GEMIN5
CBLL1
RHOG
URGCP
USP35
KCTD21
PHOSPHO2
CCDC173
TIMMDC1
UBE2D4
DLG2
EHBP1
TMEM126B
PDK4
NRL
DCAF11
MIER1
GCFC2
RNF220
FAM83D
PYROXD1
DNAI4
RNF139
CCDC186
PPFIBP2
WDR44
CAPN13
TRMT11
TCTN3
ZBTB38
FAM111A
P3H2
FAN1
USP53
TBRG1
RAD21
SYNRG
STEAP4
DCT
EIF4A2
TMEM30A
FAM161B
COQ6
SLC25A36
BTG1
RBIS
GDAP1
SLC25A45
PDLIM7
COQ8B
SDHAF3
FAM98B
NUDT15
CCN3
ETFDH
C4orf46
C5orf51
ZNF780B
SF1
TNC
AMACR
TMEM230
PARG
ASXL2
MTREX
DHX29
SRPK1
VPS26A
PLEKHA3
GJB4
PDE4DIP
CTSC
SRP19
BPGM
ZNF575
IL18R1
DEPTOR
RDH16
MBD4
IFT122
EDN2
RPL37
CBWD5
CBWD3
MRPL17
UBR2
TDG
HNRNPF
HS3ST1
VCP
FUT8
OTUD6B
TNFSF10
PPP6R2
ZBBX
RAB5B
FUT2
STAT3
ING3
TFAM
JRKL
CCDC82
LCORL
PTPN4
DCBLD2
PRKAB2
RBM28
BRIX1
SKAP2
SKIV2L
NELFE
TRAF4
RUVBL2
GYS1
GSE1
TNFAIP1
IFT20
NAMPT
ALCAM
TMEM87A
GANC
CCDC30
CLP1
ATP5F1E
ASIC3
CD55
TSNAXIP1
RANBP10
SOWAHB
SLC39A13
MFAP3
FAM114A2
POLR3F
DZANK1
FAM162A
CCDC58
FAM174A
C2orf73
ASPH
GSTA4
UCHL5
RO60
TNPO3
C5orf34
PSMC4
E2F7
GMFB
ERICH6
MTRNR2L2
MTRNR2L8
PAXBP1
DMAP1
ARHGAP39
NDUFS7
MED23
BAAT
CEP85
NME1-NME2
NME1
COX16
RPS29
PEX3
ADAT2
YWHAQ
ZNF117
ZNF623
TTLL12
TMEM242
RAB37
PPIG
FRA10AC1
KMT2A
TBC1D19
ACOX3