ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MAPRE2
ITGB3BP
EFCAB7
MTRNR2L8
BSDC1
COL4A6
COL4A5
SUPT7L
SLC4A1AP
KCNJ15
MTRNR2L2
ZNF408
ARHGAP1
GABPB2
KDM3A
ATF7IP
YPEL3
PAXBP1
SMG5
CDIPT
RPS26
THG1L
ZNF571
ZNF540
CALCRL
UBB
PRPSAP1
RPH3AL
TCTEX1D4
BTBD19
RPL27
HDAC8
TFPT
PRPF31
AHCYL1
PIH1D2
NKAPD1
KAZN
CELF1
CCNI
NDUFB3
FAM126B
CLPTM1
GTPBP3
LRIG2
AURKAIP1
SSBP1
RGPD1
RGPD2
PPIL3
NIF3L1
PPP6R1
RCAN1
RBBP5
INTS5
ZDHHC6
VTI1A
POLR3A
NOL12
ABRACL
SLC39A6
GTF2H4
NEK2
LY6K
ISY1-RAB43
ISY1
CDK12
KDM5C
IFTAP
ARHGAP39
EIF2S1
ATP6V1D
MAST2
RAD51AP1
C12orf4
DUSP6
ZNF302
CREM
ZNF383
PDE12
IL17F
SIRT3
PSMD13
MRPS33
TBL1X
UBE3B
SLFN12
RABGAP1
CD2BP2
GBA
ZNF585B
MMACHC
CCDC163
DNAJC16
FAAP20
SLC33A1
NBPF1
COX7A2
WDR83OS
WDR83
HAX1
SNIP1
AP1G1
ITFG2
IGFL4
B4GALT3
TTC26
SF3A3
MTF2
DMAC2
ZW10
AAAS
LACTBL1
GPC6
ZMPSTE24
ILF2
COIL
TRIM5
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
EPRS1
C3AR1
EIF3F
STC1
SELENOH
BAIAP2
IFI6
YWHAQ
COX16
NEMF
COPS4
WDR55
TNPO3
MICALL1
MTR
STK40
AKR1A1
SNRPD1
RFFL
DDX42
CCDC47
YTHDF2
TYSND1
HEMK1
GLIPR1L2
CYB561D1
AIFM1
MRPL54
APBA3
CASP10
JMJD1C
CHMP7
VPS35L
CEP120
USO1
TPK1
PLEKHG1
C1orf174
RERE
MRPL1
ZNF790
PACSIN2
RABGAP1L
INTS2
RPL11
RNF125
LSG1
ZNF226
RMND1
ARMT1
HEATR1
FNTB
RNF207
DNAJB12
MED11
RPA2
ZNF793
TIMM10
REXO4
SLC25A53
PHF5A
ACO2
ZNF335
ZNF56
INKA2
DDX20
CGGBP1
C3orf38
CCNC
MTBP
MRPL13
TBC1D19
EIF1AD
BANF1
STAT3
TRUB2
COQ4
TUFT1
SH2D5
CCDC130
PLK3
RSPH3
PEAK1
HMG20A
GAPDH
UFC1
UQCRC2
PSMB5
GPX1
ZSCAN4
CLASP2
CEP162
CPN2
TUT1
TRMT11
EIF5A
ZBTB40
RBM25
CALCB
ZNF331
NOL8
CENPP
DYNC2I2
SLC35A4
APBB3
RBMS2
GTF3C5
FEM1C
CLCN3
NRL
DCAF11
RCAN2
FRRS1
CCDC97
PSMB7
TRMO
SIN3B
ANKRD1
BORCS7
RFXANK
BORCS8
PCNP
USP9X
CSTF2T
ZNF461
C19orf25
CLN3
NME7
BLZF1
ZNF623
ZNF829
ZNF568
PRKCSH
CCDC151
TIMM9
KIAA0586
ZNF221
AASDH
TBC1D22A
ZNF566
ELSPBP1
ZSCAN30
TCIM
KDM1A
ZSCAN22
SCYL3
KCTD9
CDCA2
SLITRK5
GORASP2
ZKSCAN2
EFHD1
TRMT1
LURAP1
ZNHIT3
NAV2
TTC31
CCDC142
ZSCAN23
MNAT1
XPNPEP3
ST13
SMG8
BNIP1
NCOA7
SESN1
CEP57L1
UIMC1
TRAPPC8
TM2D1
SUGP1
MAU2
STAT6
CCNG2
SCARB1
SLC7A11
FRA10AC1
RPS3A
IRF9
ZFP30
WDR11
UBQLN1
TBCB
POLR2I
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
EFCAB14
TFB1M
PPIP5K2
GIN1
RBL1
ZRANB2
HOXB13
UTP3
PRPF18
FAM234A
TOMM40
GPATCH3
ZNF300
CD320
C6orf118
TBC1D1
FCRLA
ABCF2
PEF1
MRPS18C
HELQ
NUDT5
CDC123
SULT1C2
NOP16
HIGD2A
EIF3E
PLPP5
PSMD3
ARMC1
CMSS1
NDUFS7
MED18
CSNK1E
EIF2AK3
SMIM12
PEMT
RGL2
CACTIN
CELF3
TTLL12
SNRPD3
GUCD1
ALG14
SIRT4
C19orf48
LZTR1
PREPL
CAMKMT
ROCK1
SLC1A3
TTC32
VPS13B
PES1
HBS1L
NIP7
COG8
SH3BP4
TEFM
RPS27A
CLHC1
MRPS23
SUGCT
MPLKIP
SPEF2
RPS7
TIGD1
EIF4E2
UFD1
CDC45
RPL26
TXN2
EHD2
GTF3C3
OSBPL8
RUFY4
SPR
POLD4
CNPPD1
KAT7
RETREG2
HACD2
PLK2
INO80B
SOD2
WTAP
TMBIM1
TTC14
SNX3
ABCD2
ZNF2
NRDE2
FURIN
PIP5KL1
RBM45
CLTC
NEURL4
IFT46
PIK3CB
PUS10
PEX13
ZNF165
ZNF14
NECAP1
KIAA0319
ALDOA
CES3
CCDC59
CEP85L
TMEM259
CCDC107
SF3A1
CCDC157
STX12
HSCB
CHEK2
LIMCH1
CBR1
PRKAG2
PNISR
RPS14
ZBTB45
YJU2
VPS52
RPS18
CZIB
DNAJC25-GNG10
DNAJC25
INO80C
GABPA
ATP5PF
CCDC174
MDC1
FDXACB1
C11orf1
ZNF708
UTP18
MBTD1
KLK10
STX18
ZNF585A
TMEM128
TMEM69
HAUS6
KIF20A
BRD8
DLAT
WASF1
CDC40
KMT5C
RUVBL1
IPO13
ZNF260
CENPA
GABARAPL1
SULF1
NHS
CDK5RAP1
BANP
SFSWAP
OSGEPL1
RHOT1
ZBTB8OS
RBBP4
CPPED1
RIF1
SASS6
COPS7A
CLCN4
POLR2J3
USP22
ZFC3H1
THAP2
UBXN7
ZNF24
METTL1
EEF1AKMT3
SLC25A44
NKX3-2
PEX3
ADAT2
IPO4
POLG
DDX41
CTH
LIMA1
WASF2
PLEKHG2
G2E3
MAN1C1
MOB4
MRPL48
MEGF8
PIGL
ADGRL1
ACSL1
BRCA1
DNAL1
LRP10
DMAP1
UBOX5
FASTKD5
TIMM50
PTPA
CRAT
DCLRE1C
GCNT2
IFI44L
ABI3BP
TMEM222
SRSF4
SRSF1
CORO2A
ATXN7L3B
GTF3C6
PMF1-BGLAP
PMF1
DHX16
TARS3
ATG4C
DDX46
PPOX
DYNC1I2
ANKRD17
MRPL27
EME1
RPF1
CDK5RAP2
FUCA1
MRPS14
THOC5
CALM2
AP3B1
LYPLA2
SLC35E2B
SBNO1
TXNDC17
KIAA0753
ADIPOR1
HTR3A
PAFAH2
TMEM101
FOXO3B
RPS29
NDUFS3
KBTBD4
APOL2
GTPBP2
INPP4B
TAOK2
GALM
TM9SF4
TAF12
SRCAP
LOC730183
SECISBP2
ACP3
DONSON
FHL1
SULT2A1
ZSCAN25
DNAJC11
PIKFYVE
SMARCD1
UBL7
FOXP4
ATP2C1
POLR3F
DZANK1
ZNF573
CSTF3
GHDC
TRMT61B
ZBTB20
SPNS1
KLRC2
ZNF791
ZNF490
S100A13
VPS45
HIRIP3
MUC1
PDE4DIP
CDK11B
MCCC1
NAA38
NSUN3
DHFR2
CYB5D1
MBNL2
LMNB2
S100A1
ZNF215
SEC16B
BRD4
HEXIM1
WDR5B
TNFRSF19
SH2D3C
AGPAT4
RBM42
SMAD3
ARHGAP18
IFIT3
PRSS23
RAB30
NEK4
CYB561A3
TMEM138
TAF13
AARSD1
FAM124B
ACBD4
HIBCH
FAM199X
USF1
SCGB1A1
PDCD6IP
C18orf21
QRICH1
DNAJB4
BCL2L13
FGD4
MED16
DDI2
CACHD1
ORAI3
CHST4
PDE4B
CCDC74B
SELENOP
SCP2
SPHK2
RPL18
PSMD8
TIMM22
NAPA
KIF2C
LMNB1
ASXL3
GDAP1
IREB2
CMPK1
DHDDS
WDR75
DNPEP
CARS1
SYNJ2BP-COX16
SYNJ2BP
RPL23A
VWA5A
APOBEC3G
GBP2
PPIG
DNAJC6
RCC1
PPIL4
ZNF764
LRIF1
ACBD5
CENPW
COA3
CNTD1
CREB3L2
RTTN
APRT
TRPC4AP
SPAG9
ZNF416
MECR
PMVK
INSYN2B
ZNF506
FAM71E1
EMC10
SHB
ACOX3
TRMT44
LSM5
ANO8
GOSR1
GNAL
ELOVL1
PDK2
SIAH1
SLITRK1
CCDC74A
KANSL3
MTIF2
MRPS15
PRRG2
NOSIP
EXOC7
TMCO6
AIP
LMNTD1
ZNF806
SNAP47
JMJD4
TTI2
C2CD5
CD55
KDM8
UBE2Z
TBC1D9
CDRT1
PUM1
NOS3
NR1H3
ACP2
FAM13A
MTOR
FBXW7
ZZEF1
CYB5D2
KIF15
KIAA1143
ARHGAP19
ZNF254
PSD
MRTO4
EMC1
AMOTL1
KIFBP
RPAIN
NUP88
PRR13
PCGF1
FBXL15
PKD1L2
FAM228B
SF3B6
PPIH
CCT8
CRNKL1
CFAP61
FAM160A2
PRR3
GNL1
PTCD2
MRPS27
FBXO16
CFAP298-TCP10L
CFAP298
NECAP2
SENP1
PFKM
ZNF518A
EIF4A2
ARHGAP9
FKBP8
MARS1
PRKAB1
KXD1
COG7
ZNF576
IRGQ
NDUFA9
AKAP3
NXT2
CCS
CCDC87
WDR43
DDX18
RPS19
ATP5MC3
ATAD5
ARRB2
CASP8
REPS1
AMPD3
EGLN2
MFSD6
CLASRP
HMGB1
USPL1
HSPE1-MOB4
HSPE1
HSPD1
SLC35B1
PSMA1
TMBIM4
ANK3
ZNF180
ACVR1
ARL6IP5
PRKCI
SLC35F2
ZNF700
ANK2
CSRNP3
GRIPAP1
TMX2
MED19
INTS4
NUDCD3
FAM217B
PPP1R3D
CUEDC2
SLC25A21
SELENOF
HS2ST1
TMEM219
PHB
RAI14
PPP6R2
TBC1D17
AKT1S1
MED28
RRAS
MAT1A
AP3S2
C8orf37
SREK1IP1
CWC27
WARS2
PARK7
ARL14EP
UBXN4
GPN2
SULT1C4
TNPO2
CERCAM
SNRPB
AARS2
WDPCP
MDH1
DHPS
POC1B-GALNT4
TNFAIP1
IFT20
RUFY3
WDR89
ZBED5
ERGIC2
MTFR2
DNAJC12
SMG7
GTF2B
SMAP2
ZNF687
IRAK1BP1
MYBBP1A
SH3BGR
PIMREG
PLA2G4C
SLC30A10
CLUAP1
MST1
COQ3
IWS1
MFN2
RPL23
TEX2
AKIRIN2
CENPH
TBX18
MTRNR2L10
DTX3
NSA2
GFM2
GMPS
RPL29
GCLM
RIMBP3C
RIMBP3B
SNU13
ANKRD13C
NFX1
ANXA11
PRR14
ZNF599
ELP5
CTDNEP1
RTCB
DENND6A
STING1
DRG2
RABGGTA
MRPS16
TENT2
EXOC5
AP5M1
KLHL32
PLCH1
YLPM1
TRIM23
TRAPPC13
SHLD3
CHD9
KIF27
GLRX
SPRY1
VTA1
NMBR
SCAND1
ZZZ3
RESF1
NAT10
THAP10
LRRC49
ATG16L1
PCNX3
IPP
EXD1
CHP1
FBXO8
CEP44
PIK3R2
MAP3K11
CALD1
KATNB1
COMMD2
ZNF391
EXO5
RPS15
ERCC6L2
TCF3
DHRS4
PAM
MSANTD3
TTF2
UQCR11
MYBPHL
C11orf52
NEBL
TNFRSF9
ZNF527
SLC30A6
STAT1
YARS2
PDE7B
CCDC90B
ATP6V0E2
NOLC1
RBM8A
ZNF142
BCS1L
SYCP2L
RPL32
ARID5B
KIAA0408
C17orf75
ATG101
PPP1R11
SLC25A28
WIZ
PDSS2
BAZ2A
MDM4
CREBL2
PDCD6
HIPK1
GOLPH3L
B9D1
KBTBD3
AASDHPPT
TAF15
SF3B2
MAPK7
NOCT
SLC25A35
CTSL
EXOSC5
BCKDHA
TMEM144
GRN
ZNF593
C1orf232
NCLN
PARN
SLC29A1
MRC2
CDK19
ZNF770
TMBIM6
PRCC
UTP11
SLC35D1
PPP2R5C
CUTA
SUN1
RBM3
MRPL35