ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4171357 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◣ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
CAT
YPEL3
ACYP2
PDE11A
FAAH
BAAT
FEM1C
AKAP10
FGD3
CYP17A1
ZNF562
DEFB124
C3orf14
FABP6
ZMYM5
NME2
TAS2R4
SLCO1B3
CEP85
VN1R2
ITGB3BP
EFCAB7
ZSCAN31
JAKMIP1
ACOX3
TRMT44
TMEM132A
EIF4E
KMT2A
SET
ARHGAP39
CDYL
BTNL2
CD47
PES1
TCN2
CLK4
PARP14
THOC2
SLC35G3
EHD2
FABP7
OTUD7A
GOLGA6L7
THOC5
ABCG1
RAP2B
ZNF117
ZNF280D
MLLT3
XKR7
PIAS3
ACTL8
CCDC185
IQSEC1
EID2B
SLC35G5
FAM25E
NOS3
PSMB2
PCOLCE
POLE4
ZNF561
ADORA2A
RTKN2
RABGAP1L
CD5
YWHAB
MRGPRX3
PPP1R12B
CYP4F11
CBX1
TMEM70
AKR1D1
SRPRB
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SOGA3
DMAP1
ZNF609
MKRN3
NSFL1C
XPO1
TSKU
ZNF623
DCTN4
KAT6A
WIF1
LOC102724265
SMARCD2
ZNF426
KIF21B
CSRP2
MTF2
DRAP1
C11orf68
DISP1
DPYD
SIVA1
FRA10AC1
STX16
ORC4
MBD5
LUC7L2
FMC1-LUC7L2
NSMCE4A
FRMD3
PITPNM3
KRTAP19-2
TRIM32
ASTN2
DUSP6
FUT3
BARHL1
SPOCK1
KRT72
PIP4P2
NOD1
RNF130
CCDC88B
CRLF3
PGK1
PLCH1
SKP2
LMBRD2
MYORG
NPAS4
RNF207
TMEM41A
ZNF341
BRWD1
DPY19L4
ZNF114
SMU1
BTD
SLTM
EVI5
TEX19
IFNB1
EMC9
RABGAP1
ANKRD54
LHX4
SSB
RAB23
HDAC1
TCF4
AURKAIP1
HTR5A
ZBTB40
NFAT5
GSTA4
MOB4
CT45A10
QSOX2
BRMS1L
TOR1AIP1
N4BP2L2
MED23
FUT10
FRG1
SERPINA5
ZNF76
C5orf49
CDH10
RBBP5
CFAP92
HSPE1-MOB4
HSPE1
HSPD1
TLE7
SSBP1
SLC44A1
ZNF26
MRPS31
ITGA4
NEMF
ZNF326
CT45A7
CT45A6
CT45A5
NELFCD
ACTN2
C1orf54
DAB1
GTF2H2C_2
GTF2H2C
PKD1
DDX31
MYOM2
CCDC144A
ADNP
JMJD1C
REEP3
SERPINB1
LIG4
ABHD13
ACADM
LARGE1
INTS12
GSTCD
NUF2
NDUFS7
MRPL44
TTLL12
GTF3C5
ZKSCAN2
PRELID3A
RASEF
RPS7
FRMD4A
NCBP3
CAMK1D
ANK1
DSTYK
ANO5
ZNF567
SAMD4A
FAM136A
CT45A9
CT45A8
CT45A2
TMEM242
PTPRCAP
PDCL2
CCDC130
HSD17B12
DCP1A
DCAF10
MIER1
NAA35
AP5B1
AR
IL1R1
CPPED1
CLUL1
RUNX2
HLA-DPA1
PRAME
WDHD1
SOCS4
WDR11
ZCRB1
PPHLN1
FAM90A1
SLC39A3
COMMD4
TRMT1L
SWT1
SIN3B
EIF2D
REXO4
TRMT5
SLC38A6
UNC80
OR6C1
UBE2O
AANAT
M1AP
FER
NDFIP1
SFPQ
SNIP1
CFLAR
KDM4E
NUTF2
CENPT
ZNF362
RAB37
GTF3C3
CLTC
GLS
BTBD11
KDM3A
KLLN
ZNF668
PTEN
ZNF646
TRIP4
RDH16
RTTN
ALDH3B1
PPP5C
SCNN1G
GPR50
TC2N
DNAJC6
USP9Y
B4GALT7
SORD
LY6L
RGPD3
RCOR3
ELOVL2
ARHGEF12
DHRS4L2
ALG1L
RHEX
PEG3
ZIM2
USP30
MEMO1
VANGL1
ADAMTS3
ART1
FAM207A
NCAM2
COMMD2
CLTB
TMEM65
CCNG2
SUN5
HGC6.3
PRSS50
PUM1
C17orf75
VWA8
BSDC1
IQSEC3
MTRES1
RAD54L2
HSD11B2
HYAL1
FCGRT
GTF2H2
PPIP5K2
GIN1
SLC9B1
JAKMIP2
DUSP4
VANGL2
ABI2
FGF8
TACO1
PHF21A
MAP7
TLK2
PER3
NME1-NME2
NME1
KDM5B
HAO1
STAU1
BOLA2
BOLA2-SMG1P6
TTC26
TMA16
CLEC9A
PUS10
PEX13
TRAPPC5
YAP1
SPDYA
RAP2C
FAM160B1
NEGR1
AKAIN1
CDA
WNT16
BECN2
DRG2
SLC35A3
NOXA1
RSAD1
NEK7
CHRNB2
WDR43
KANSL1
KLHL11
PLCXD1
PSMF1
DUS1L
KIAA1549
LRRC37A3
ARHGAP19
SYT1
EYA1
BMS1
KDM3B
INAFM2
AGPAT3
COX16
TSC22D4
SF3A2
PLEKHJ1
BAG3
IST1
DDHD1
ZC3H14
DACH1
HOMER3
ZFP30
TMED1
CAPS2
NGLY1
SAMD13
NTSR2
ZPBP
CPXCR1
KMT2D
FOXJ3
C2CD5
WNT5A
EIF4A2
ZNF354C
BCAR3
KCNAB2
RSPO2
SF3A3
ATXN7L2
CALM1
ARHGEF2
COPS7B
ZNF605
CAPRIN1
NRG2
CNOT6
ZC3H11A
ASB14
PRUNE2
PIGQ
BSCL2
GNG3
TTC32
CALCRL
CCDC88A
FAM13A
PSMD11
KAT6B
SEMA3D
FTCDNL1
TMEM68
TGS1
NCOA7
CHD1L
PRKAB2
RAB12
RNF213
TAPBPL
SMG7
MLLT1
PPP6R1
INTS10
MPHOSPH6
ZMYM4
ZMPSTE24
SLC25A51
PDE4C
CSRNP1
TGIF1
BOLA3
CRYBG1
CCDC181
SLC24A1
INTS14
STAT3
C18orf25
ZCCHC8
CUTC
COX15
SIDT2
ACTL10
H1-6
UTP3
AP3S2
GARS1
EPS15
SUZ12
RANBP17
TP53I11
RAB38
IQCA1L
MNAT1
RPS20
SUGCT
MPLKIP
RNF6
ATF4
CNKSR2
BAZ2B
ULK2
GRK7
PXDNL
BRD1
LAMA2
METTL9
HDAC2
NBEA
MAB21L1
STYXL1
VPS13B
PCID2
CUL4A
ANKAR
TFE3
TCERG1L
RABGGTA
QRICH1
PLCL2
MLLT10
DNMT3A
BAG2
HSF5
LAMB3
CERS3
CLBA1
ZNF669
GABPA
ATP5PF
ZNF398
TMEM38A
SMIM7
C11orf52
CTAGE1
DNAJC25-GNG10
DNAJC25
CCDC97
ENOSF1
SLC25A31
PHIP
FAM98B
POLDIP3
SECISBP2L
RAB6A
SSBP2
OR2L13
PRKG2
RCOR1
RNF215
ID4
LYZL2
INO80D
TCF12
SLC39A13
CBR1
RPS14
TOMM20L
CDC42SE2
SCG3
ARFGEF2
NCAM1
SOWAHC
SEPTIN10
TEFM
KCNH1
FZD9
BOLL
COLEC11
ADRM1
POLR2J3
ALG10B
NECAP2
GPAM
CREM
DDHD2
ZFP64
OPRM1
LRFN3
OR51H1
HMGB1
USPL1
CENPV
CT45A3
PCDHB5
SAR1B
CEP41
CPSF1
ZNF639
HDHD5
TMEM229A
ZBTB6
LEMD2
TTLL1
RCAN1
CDK12
SEPSECS
PRELID3B
INO80C
LRP6
AGK
RTN1
STEAP2
EPHA10
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CACNG5
HES3
RGPD5
RGPD8
DNAJC21
KIF21A
KMT5B
ZNF808
LTBP2
GLG1
CBX3
HNRNPA2B1
TYMSOS
TYMS
VTA1
NMBR
AGGF1
WSCD2
LHCGR
ANKRD62
CFAP44
MYF6
TSEN15
HNRNPD
ABCA3
MAML3
SMG8
NBPF1
DNAJC11
DDX59
SOCS5
DPP6
SCAND1
CFAP298-TCP10L
CFAP298
CCAR2
DHRS13
GOLGA3
VPS29
RAD9B
VPS37D
CDC16
NTNG1
PAFAH2
TGFBR2
GTF2IRD2B
GTF2A2
RORA
GJB7
ADAMTS1
STX18
ZNF391
MAST2
FAM20B
ZCCHC4
ZNF846
STC1
POLR3G
MBLAC2
EXD1
CHP1
AMOTL1
OSBPL1A
MTMR6
SENP1
PFKM
ZC3H6
UBE2D3
CASP8
HM13
BMF
NEUROD4
SLITRK1
IL18R1
GADD45G
SELENOV
SELENOH
LNPEP
MKRN2
SYT7
JADE1
PPP2R3A
CHRFAM7A
MARCHF11
TM4SF19
TPR
ODR4
ATAD2
RABEP1
C1orf53
GLUL
KCTD8
ADGRL3
ZIC2
ZNF292
TIGD1
EIF4E2
FGD4
GTDC1
ZFP41
EFCAB13
PTPRK
KCNB1
CEP72
ING2
CLUAP1
RBL1
SLC29A3
WASHC1
TTI2
MEX3C
GEMIN5
RAVER2
CEBPD
KCNN3
METTL8
DCAF17
COQ2
ROBO3
HERC6
MANBA
PATZ1
KCNH5
VIRMA
LSG1
RWDD1
SPEF2
NAA38
CALB1
DNAJC15
SULF1
CHD3
NMS
PDCD4
CCDC166
TDRD12
POLR3B
MRPL48
CDC73
SNRPB2
RPL26L1
GFI1B
MED4
TSC1
YPEL1
INTS9
HMBOX1
NUCKS1
ZFAND6
CDC14C
ZNF829
ZNF568
CHMP7
FNTA
SEC61A2
SLC39A11
ATF1
RAB11FIP1
H3-3A
PARP8
ARL11
TPK1
DHX40
TUT7
ARID2
TSEN54
CASKIN2
RNF24
CEBPA
CTNNB1
ZER1
FXN
PRPF3
MEF2A
MYOCD
UIMC1
SPRED1
GAP43
PBK
TDRD9
GDPGP1
CIB1
RNF187
WDR47
FBXW4
LARP1
GCLC
YTHDF2
TBC1D13
PDGFD
SLCO4C1
MARCHF6
MAP2
TEAD1
B3GALT1
PRRC2B
VPS36
LRFN2
DAZL
GGN
FOXN3
TMEM63C
FAM234A
GGACT
ELF1
WBP4
SAV1
WDR74
PTPN4
USP3
DNMBP
NCOR1
STK31
MAPK1IP1L
ESCO1
HERC5
GTF2A1
PRDM4
SMC1B
RIBC2
CCDC59
PPP2R2B
UBR5
SLC4A8
KLF3
NBN
GTPBP3
NOTCH2NLC
ANO8
CLPB
SPECC1
PYROXD1
SPAG9
SMAD5
VPS37A
CNOT7
ATL1
IGSF11
PFN2
SLC12A5
CFAP91
CCDC178
TEX55
FUT9
KANSL3
ATR
KDM1A
CCNC
GNAL
SOX30
RBM12
CPNE1
STON2
BNIP1
OTUD7B
CDC7
EBPL
TEX22
KLHL20
TM7SF3
SKIDA1
CDS1
WIPF3
WDR24
C1GALT1
VPS16
PCED1A
KDF1
TATDN3
NSL1
ZNF518A
MARCHF7
BTRC
PLAGL1
SEC24B
RSF1
CCDC50
SYCP2L
ZBTB37
UTS2B
CTNNA1
CHRM3
GPR26
ANKRD36B
ATL3
ATXN2
SCN9A
TNFRSF10D
CDC42EP3
USP25
RBM46
TDP2
ACOT13
FAM133B
EIF1B
RGPD6
GNG2
STEAP1B
PATJ
BRIX1
PIGBOS1
PIGB
PLD4
ETFRF1
CFAP94
SUGT1
GPR37
TDRD5
CYREN
ARHGEF7
TMC7
SHCBP1L
BRPF1
PPIL4
ELL2
TAF1B
RIMBP3C
RIMBP3B
PRKAR1B
NPL
PAG1
FAM83B
KRTAP4-6
BTC
TAOK3
TRPC4AP
PGBD2
GOLIM4
SH3YL1
ACP1
SAP30
ZNF43
MAEL
BIRC6
SLC12A9
EPHB4
CAMLG
EXOSC6
CADM1
LPGAT1
RPL26
MTHFD2
SPR
ST3GAL6
KCNV2
ZBTB45
LINGO1
TMEM45A
GALC
SPTSSB
IMPA1
C10orf53
PVALEF
AATK
FOXR1
ISY1-RAB43
ISY1
ELAPOR2
DBF4B
TASOR
PTGS2
FANK1
SCYL3
ATP8A1
C7orf31
PCDHGA3
RGS6
TIPARP
N4BP3
MTMR10
DPP9
TOX4
RAB2B
SCMH1
RPS29
FZD1
IGFBP5
ELK4
FDFT1
NUDT8
GOLGA7B
HDGFL1
SYDE2
NOTCH2NLA
DUX4
UGCG
LCLAT1
PDE5A
PCDHGB4
ZMAT3
ST6GALNAC5
SRSF9
DYNLL1
EPM2A
ASPM
HERC1
TAF1L
MTRNR2L2
MTRNR2L8
GBA
PAXBP1
SAMD4B
PEX3
ADAT2
YWHAQ