ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FANK1
TTLL12
KLHDC4
PMAIP1
CBX1
ZNF264
PAXBP1
EEF1A1
CANT1
PDXDC1
MRPS7
GGA3
POTEH
H3-3B
NDFIP1
FAM117A
SHOC2
BBIP1
FH
ATAD2
NBPF1
CACUL1
MPZL1
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
TMEM71
PHF20L1
CYC1
UBALD2
CCDC137
RPL38
ZFP91
STX12
AHI1
GRB2
USP10
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
REPS1
TCF7L2
PDCD6
ZNF12
SMC3
DDX17
MCMBP
NACC1
SMNDC1
C8orf76
UROS
BCCIP
TNFAIP8
FBRS
ABCD3
EXOC6
LOC100289561
NME2
VKORC1L1
MTRNR2L2
EIF3F
WDR43
SMAP2
KLF5
SURF4
C10orf88
ATG16L1
ATL2
CSNK2A2
UBR5
CHORDC1
ZKSCAN1
PCOTH
MIPEP
IMMP2L
ZNF652
PLEKHA1
SEC61G
DNAJB12
FBXO11
ICE1
MTMR4
SPAG9
DPP9
PPA1
SEPTIN9
TEX10
NDUFAF6
DYRK3
TACO1
C7orf25
TAF10
C15orf40
PIGF
CRIPT
SPATS2L
TSPAN10
NPLOC4
PRKACB
MTX2
BICD2
CCDC186
ST14
ABCA5
EFR3A
PKD1
LRRC47
ARHGAP11A-SCG5
ARHGAP11A
CHKB
TADA1
SERF1B
SERF1A
POMZP3
CEBPG
ABL1
MTHFD2L
WAC
MYO5C
DPP8
RPS15A
GLI4
MSANTD4
TEPSIN
NDUFAF8
ZNF326
SMAD5
EIF2AK3
SEC62
KRTAP4-11
RMDN1
WAPL
PANK2
IREB2
NCBP2AS2
NCBP2
SIN3B
DECR1
USP7
ARHGAP29
BSPRY
ARHGAP39
HIPK1
ASPH
SMARCE1
IKZF5
ACADSB
CLK1
CCZ1
EIF3A
E2F3
SAMHD1
MSRB2
GSTO1
WNT16
ZDHHC6
VTI1A
ALAS1
EHD4
PKD2
LATS1
DSCC1
PREP
RBM42
RDH14
BFSP1
POM121C
MRPL20
DSTN
C8orf33
PLEKHA3
COPG2
MROH1
ADAR
ETNK1
PIK3CA
ECE1
CASP2
MTDH
VOPP1
CLTA
SDR42E1
GAN
SUMO2
PDCD4
GPI
JMJD1C
RNASEH2C
REXO2
TBC1D30
RPL13
GNS
CACTIN
TM2D2
ADAM9
ARF6
LSM6
RCN2
PDP1
KRCC1
CALCOCO2
FNBP1
FAM234B
COL4A4
COL4A3
SCYL3
SLC45A4
PIGC
TMX4
WWP1
PDXK
SLC38A2
ZCCHC8
RC3H2
CRLS1
MCAT
RBM22
PIP4P1
SAFB2
SAFB
GSK3A
C11orf97
FAM13B
VAMP3
SBF1
MEIS3
SEC22C
SS18L2
OAT
CLTCL1
ETS2
CBX2
RECK
SMARCD2
SENP1
PFKM
PHAX
YTHDF1
SEC11C
USP36
ACAA1
FAM169A
ACOX3
TRMT44
KIAA1586
FBXO31
POMP
CCDC138
RWDD2B
DYNLL2
C2CD2L
RBPMS
MKRN1
TESK1
FARP2
FADD
ZNF706
RFT1
DUSP5
PLA2R1
PRPSAP1
DGKZ
TSC1
LEMD2
RPS27A
CLHC1
HPS6
IGSF3
NPC1
WRNIP1
TPT1
ELOVL5
ZNF623
KDM1A
ANKRD46
FAM83D
MYBL1
RALGAPB
MRTFA
USP33
TIGD2
LRCH3
TMEM131L
HNRNPM
GPS2
RAB11B
PLEKHF2
ELOB
MICU3
ANAPC7
FAM124A
NDUFAB1
MRPL38
OXR1
TBC1D31
PRDM4
RAB4A
PAWR
RGS22
NOTCH2NLB
RAB5A
EFHB
MAPKAPK5
ADIPOR1
TMEM245
TMOD3
DNMBP
SLC25A37
FERMT1
TBL2
EXT1
RPL7A
MED22
OSBPL5
ATP8B1
GJB2
RAB18
PREPL
CAMKMT
EFCAB14
AKIRIN1
MEST
PGAM5
PIAS4
FLYWCH1
RC3H1
METTL23
JMJD6
ELOVL7
TMEM160
ZNF775
YPEL2
PRELID3B
FRG1
RUVBL1
EEFSEC
PGS1
UBE2Z
RAB5B
LRRC58
RP9
ARL16
SOCS5
HGS
UTP18
MBTD1
DNPH1
INTS8
TM9SF3
OTUB1
ATP2A2
PAG1
PRDM2
ZBTB10
ARSB
TMCO3
DCUN1D2
FEM1C
COX18
RAB6A
SYT1
ABI1
PELI1
CXCL2
UBE3A
GLG1
ARL8A
PCNX2
ERO1A
ACVR1B
PDPK1
DOCK5
COBL
KRT19
ANGEL1
TAF5
HERC3
ANTXR2
VPS13C
MGRN1
RB1
OCIAD2
ANAPC11
ALYREF
RNF169
FANCA
CYTH1
MCL1
SCN8A
TSPAN3
UBE2G2
DOCK1
DENND10
BMT2
SLC25A28
SUFU
FBXO33
TMEM175
GAK
UBE2S
PM20D2
SLC4A7
NF1
CTNNAL1
EGFR
NFAT5
TBPL1
SPG11
HMGCR
TRAPPC3
PEX7
UHRF2
GTSE1
NEDD1
MARCHF6
RPL7
RDH10
TOB1
MAP7D1
RAPGEF5
P4HB
CTAGE6
ACTL8
ASF1A
TERF2
FDX1
GMCL1
MAP3K3
VIPAS39
AHSA1
NAMPT
RRAS2
NT5C2
APPBP2
DYRK1A
YWHAH
HSP90AA1
SLC38A10
PDIA5
EPS8
NOTCH2NLA
CYREN
PLEKHG1
BZW1
ZNF607
ILKAP
MFSD12
NFATC2IP
HNRNPAB
PALM2AKAP2
LGALS3
CLTC
TRMU
NUDT4B
GPN2
XPA
ZFYVE27
LPGAT1
UBN2
HSPA4
CLYBL
CDC25A
SMARCB1
USP43
FRMD5
UBN1
GLYR1
PSME1
MAPK9
CDR2L
ITPRIP
HEBP2
CCNT2
ARFGEF1
CPT2
GOLGA7
PPP1CB
WASHC1
NT5C3A
TMEM131
GFPT1
PSMG4
ITM2B
DENND2B
UVRAG
ALDH4A1
AP3D1
RPL22
URGCP
GATM
SPATA5L1
MIS18A
RAD23B
OST4
GPX1
STIP1
ARHGEF35
RAB2A
EPB41
MAP1LC3B
URGCP-MRPS24
SIRT7
CD9
ATP1A1
AGK
DYNLRB2
RNF145
MARK2
DCAF12
SSRP1
MICOS10-NBL1
MICOS10
LRPPRC
TOMM34
PSTPIP2
PDCD5
FAM104A
C17orf80
CNKSR3
NHLRC2
DCLRE1A
XPNPEP1
SMAD1
ARHGAP17
GPRIN1
GPC1
KRTAP4-12
CD81
APEH
ACSF3
NUDCD1
LSM11
SART1
ARL5A
FAM86B1
ANK2
C9orf85
ABHD17B
SMAD3
CRELD1
DENND1A
PLPP6
YWHAZ
SPATA6L
URB1
DOCK9
MATN2
MKI67
DHRS11
ZNF577
PLCG2
MORC4
POLE4
STAT3
CTNNB1
PARK7
LRRC59
RTN4
SRPRB
DNAJC1
CLSTN1
ZC3H4
CTPS1
VRK1
NOP9
DHRS1
PINK1
RALYL
TYRO3
STX1A
KLHL20
CRKL
MTR
EEF1AKMT2
OSBPL8
DERA
SCARB1
HSPH1
FBXL13
ARMC10
CISD3
CENPC
MAGEF1
NAF1
FCHO2
USP6NL
TSPAN14
STK3
ARHGEF3
MTAP
SYBU
CXCL1
TPD52
SEMA4D
FZD6
AGTPBP1
SPG7
FAHD2A
KIRREL1
TGFBR2
SOD2
WTAP
PNPO
CYRIB
EIF5B
VPS26C
MIF
TPMT
KDM1B
MTMR12
C10orf95
ZCCHC14
NELFCD
ANKRD28
NSD2
TMEM51
CCNJ
FKBP4
MTFMT
TMCO4
TRAM1
HNRNPU
FAM53B
MIF4GD
COP1
GALNT12
SBK1
MIEF1
FAM219B
SINHCAF
COPRS
SDHA
CCDC127
RHPN1
RHOC
KLHL5
ERRFI1
PTPRF
LRRC37A3
ADPGK
UBQLN1
STAMBPL1
C6orf226
COX6C
KCTD6
HASPIN
STPG1
NIPAL3
FUCA2
PGM2
SLC26A6
CHAMP1
EIF3B
EXT2
RRS1
RNF168
SCD5
ZBTB8A
HMGB1
CCDC88A
GHITM
HACD2
SRSF2
MFSD11
EYA1
ITGA3
CNN3
HIPK3
ZC3H7A
SOCS3
ENTPD7
TNFSF9
STMND1
PTPN4
FOXJ3
PHB2
MRPL36
RNASEH1
ATRN
C22orf39
TTBK2
HEXB
UNKL
STX17
RHNO1
FOXM1
PPP6R2
RELCH
PIGN
DBNDD1
DNAJB14
DGKH
CNNM2
MSH6
ODF2
SLK
FAM91A1
PLBD2
TICRR
GAS8
TADA2B
CCDC96
FAM110C
SCAND1
KDM3B
EIF2S2
B9D1
IWS1
NT5DC1
DEF8
ZNF362
KRIT1
ANKIB1
MRPL12
OTULIN
C2orf69
PTBP3
ARPC1A
SCRN3
CIR1
MRPL52
B4GALT4
RBM12
CPNE1
TRERF1
PTP4A2
RPL14
DUT
STX3
ELK3
PLEKHH2
DUSP6
WASHC2C
QSOX1
NLE1
DESI2
NUS1
FBXW8
DOCK7
PROSER1
NHLRC3
PRPF19
ODC1
NDUFV3
COG6
CDCA7
PANK1
TEAD1
MLYCD
COTL1
TANC2
JPT1
PWWP3A
PDZD8
COA8
BAG5
CCDC178
HDAC1
PRRC2B
YES1
DDHD2
RNF139
UBFD1
EARS2
MARCHF8
DDT
OSBP
EMC8
COX4I1
FBXO42
PISD
POMT2
GSTZ1
TAF9
RAD17
AK6
UAP1
GATAD1
ROCK2
LYRM1
DCUN1D3
RCL1
SLCO4A1
FEZ2
MEF2D
CAPN2
DPYS
POPDC3
IRAK2
IFT43
DSTYK
ABLIM1
USP1
SLC17A5
PSMD1
NDRG1
AEBP2
TBC1D5
EIF4H
SPOPL
NANP
TBXAS1
MPP5
PARP8
FAM135A
HIPK2
NCOA2
CCNY
H2AX
ACADVL
SH3GL2
CHD5
HSPE1-MOB4
HSPE1
HSPD1
CELF1
ZBTB20
RANGAP1
NEK7
SCN11A
C1QBP
WDR48
TBC1D14
GPT2
POLR2D
SPIRE2
TPST1
PPP1R9B
EZR
CUX1
BPHL
MNT
ARF1
SMC4
NEO1
STIMATE-MUSTN1
STIMATE
RAI1
UBAC1
DAP
UBALD1
ARNTL2
SOHLH2
PDCD2
TOMM22
UROD
HECTD3
MBNL1
STRN
DDX21
RTRAF
ATG2B
STXBP4
COX11
GSKIP
CSNK2A1
CRY2
TRIB1
ACTR5
ATP13A2
SLC12A5
ERI3
KDF1
SERINC2
KCTD9
CDCA2
NBEA
DFFB
CEP104
CHIC2
TNPO1
THAP12
GVQW3
STRIP1
ZBTB4
DTD2
PPP2CA
PKIG
CCT2
TBCCD1
INO80
IDE
UBE2D1
AFAP1
PEX2
DLG1
LOC389199
ZC3H18
SDCBP
EXOSC10
EIF5
ATP11A
HMGN2
STX7
SRPK1
ZNF704
SLX4
CERS6
SEC16A
TJP2
C9orf163
DBNL
SRP72
SETD7
SLC25A25
SH3PXD2B
TRUB2
COQ4
PPP2R5B
RNF220
TMEM106B
RNF19A
PAM
ICE2
TKFC
DDB1
FAM122A
KIAA1958
C9orf147
NOCT
CPOX
AGPS
DCTN1
ZNF134
GKAP1
EHBP1
SYNJ1
KLHL9
MXD1
BIN3
RBM26
LTV1
SMARCA4
LAMTOR1
IGF2R
MAP4K3
HLF
TOP1
CSTB
CDKN1B
LDLRAP1
AGO2
RAB11FIP4
SMIM43
KRTAP2-3
ANKRD40
TMEM183A
RBM17
CCDC126
KLC2
GXYLT1
YTHDF3
FAM177A1
PLEKHO2
EZH2
CDC42EP4
CTSB
RNF166
PTS
SEPTIN11
PYGL
ANXA5
CTU2
TRAF3
SH3D21
RPL8
HHEX
COL6A5
PPA2
RPL10A
SLC35F2
WDR4
GALNT10
LINS1
ASB7
TUBD1
RPS6KB1
MYL5
ATP5ME
NCOA1
PPM1D
PPP4C
TOR1B
SLC49A4
ZBTB38
SREBF1
ZNF800