ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KCNJ15
BSDC1
ITGB3BP
EFCAB7
YPEL3
CBX1
ZFP30
MTRNR2L8
RABGAP1
STC1
RABGAP1L
ZNF829
ZNF568
DISP1
MAPRE2
GBA
DNAJC25-GNG10
DNAJC25
PDE11A
ZNF623
SAMD4B
COMMD2
MTF2
SF3A3
YWHAQ
DUSP6
RBBP5
RNF187
NUF2
COX16
UTP3
CLTB
TBC1D19
ZNF292
TMEM132A
ATP5MC2
TMEM41A
ZNF566
ZSCAN22
RPS7
TRMT5
SLC38A6
TOMM20
SOD2
WTAP
TRIP4
GTF2H4
HTR5A
RNF125
RWDD1
CCDC174
SSBP1
MAN2A1
EPHA3
TSFM
TTI2
ATP1A1
RERE
CAT
CEP85L
SELENOH
NEMF
NDUFB3
FAM126B
SLC24A1
INTS14
MED23
ZNF570
ZNF569
CWC25
MRPL1
ARHGAP39
GLIPR1L2
ZNF117
PEX3
ADAT2
AP3S2
PDE1A
PNMA2
BMS1
GTF2H2C_2
GTF2H2C
SLC45A4
BRAP
ACAD10
LRCOL1
TTC26
TTLL1
PAXBP1
MNAT1
DMAP1
MTR
FBXW7
ZNF790
PPRC1
TMEM242
CDC5L
RAB18
JMJD1C
NR1H3
ACP2
MMACHC
CCDC163
THAP10
LRRC49
RBBP9
FGFBP3
SNRPE
FAM13A
CFAP298-TCP10L
CFAP298
SMG7
PDCD6IP
NDUFS7
KDM3A
DNAJB12
SIKE1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
FRA10AC1
PAFAH2
RAB30
PPIH
MRPS18C
HELQ
BANP
RAB5IF
APRT
NME1-NME2
NME1
NEU1
ZNF226
ZMPSTE24
CCDC59
MRPL48
CALCRL
CHCHD6
FAIM
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
PDGFD
EIF2D
SLC33A1
GABPB2
TMEM208
LRRC29
RUNDC3B
MTRNR2L2
ZNF391
PARK7
RANBP2
NUP155
RCAN1
POLR3B
POLDIP3
SLITRK5
TMEM38A
SMIM7
RPL27
ZNF571
ZNF540
LURAP1
PUS10
PEX13
KANSL3
RBM45
ZNF300
RTTN
PNPO
MRPS14
HAX1
CCDC107
ZNF350
TRMO
STAT3
NECAP2
ZNF687
SYNPO2
WDR11
MRPS23
SMIM13
TMEM259
RPS29
TACO1
SAR1B
PKIB
SERINC1
GALK2
CCNC
SNRPD1
PARP2
COPS2
ATP6V0E2
TMEM43
CHCHD4
RPS3A
ZNF527
DCP1A
TEFM
ZNF165
BAIAP2
GOSR1
HEXA
STOML2
RPA2
ZNF354A
ZBTB8OS
RBBP4
FAM199X
GTPBP3
NCOA7
TIGD1
EIF4E2
RIF1
ANO8
ZNF791
ZNF490
MYO1H
RPS14
RPL5
SLC35B4
TTLL12
MOB4
CDK19
TBL1X
AMD1
VPS45
SLC3A2
FAM174A
REXO4
DCT
CUL5
PIGC
STX16
RPS13
BORCS7
ECHDC1
ZNF285
SULT1C2
AURKAIP1
DCLRE1B
AP4B1
INTS2
CCNL1
DSTYK
EPRS1
CLPTM1
EFHD1
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
LRP6
SF3B5
STX18
DRG2
MIER1
DNAI4
EIF3F
POLG
COX7A2
SLC35A3
MRS2
LUC7L2
FMC1-LUC7L2
FMC1
POLR1F
EXO1
RPL37
ZNF383
PCDH15
NOS3
NOP16
HIGD2A
SPATA18
PPIP5K2
GIN1
COPS4
MITD1
CDC73
NBPF1
HECTD1
NRL
DCAF11
ZSCAN30
KRR1
TOGARAM1
KLHL28
DYNLRB2
FDPS
ACTRT2
WDR36
TGFBR2
GPR137
TAF12
TRIM46
KRTCAP2
SUPT3H
N6AMT1
GOLPH3L
ALG10
MTMR9
CHEK1
MRPS33
RRN3
MFSD8
ABHD18
HIGD2B
BBS4
OSGEP
APEX1
CDKL2
GSTA4
CDK5RAP1
PPP1R11
NOL12
RPS12
PPOX
DAXX
AFG1L
GPR89A
CCDC97
ATG5
DDX41
STXBP3
OAZ3
MRPL9
TRMT11
LAMTOR5
CCDC120
PPIG
TPR
ODR4
GRPEL2
SLTM
GABPA
ATP5PF
NMRAL1
HMOX2
LRRC59
UBOX5
FASTKD5
TMEM106B
ZNF793
ZNF561
PHIP
ITFG2
SRP9
HIPK1
PRDM1
FOXP1
GPN2
FOXO3B
METTL9
DDX46
CSNK1E
IPO4
TNPO3
POLR3G
MBLAC2
ZNF56
UBR2
ABCB10
PNISR
H2BU1
H2AW
P2RX6
SUPT7L
SLC4A1AP
LOC102724265
ZNF846
DCP1B
PES1
ZNF501
MICU2
BRF2
INO80B
HEATR1
TCTE3
ERMARD
CLN5
DCAF8
SNX14
TSTD3
SYT1
RAB37
WDR74
TSEN15
ATF7IP
TRDMT1
PLS1
SRP54
SLC2A4
SLC25A21
HMGB1
USPL1
C3orf14
ZSCAN25
ZSCAN31
HBS1L
EIF3D
MTIF2
DHX16
ALG14
ALDH9A1
PSMD11
TMEM116
ERP29
VPS26C
BAG6
NUP205
SLC30A5
IST1
CPPED1
ATG4C
ABCA3
SLC25A53
VPS35L
ZCWPW2
AZI2
RIMBP3C
RIMBP3B
KLHL32
TXN2
IRAK1BP1
WBP11
C12orf60
DPYSL3
C8orf37
DEDD
CRNKL1
CFAP61
CYCS
CHD1
CALD1
TMEM222
ZNF783
CYB5R4
UFL1
MRPL24
ANKRD36B
INPP4B
AQP4
DHTKD1
ZNF335
BOD1L1
RSL24D1
H4C15
H4C14
ASCC1
ANAPC16
SLC17A5
DNAJC19
C11orf65
MED18
GORASP2
GTF2B
IRF9
VPS25
TAF13
DUSP12
ZKSCAN8
NMT2
EXOSC10
MRPS31
TRUB2
COQ4
FAM228B
SF3B6
TPK1
DNAJC24
DCDC1
MRPL45
GTPBP10
TAF3
CCDC124
RPAP2
GLMN
RUFY4
ACOX3
TRMT44
VTA1
NMBR
SNIP1
CCNI
SEC23B
TMA16
THG1L
DHRS13
RAD54L2
FAM234A
UBE2L3
UBE3B
COMMD6
UCHL3
PLCH1
IPP
FBXL19
INSYN2B
SMPDL3A
PLD4
PABPN1
SULF1
NLGN1
PUM1
CEP85
WDR55
RPS26
ZNF518A
OSGEPL1
BCKDHB
TMBIM4
TBRG1
MED11
PARPBP
NUP37
GAR1
IPO7
ZNF345
LSM5
ATG101
RALBP1
COG2
ARL14EP
PACSIN2
RNF144B
ZNF408
ARHGAP1
TIPARP
RNF6
CIZ1
AASDH
RFXANK
BORCS8
SAYSD1
KBTBD3
AASDHPPT
PEAK1
HMG20A
ZNF589
JOSD1
GPATCH4
C6orf118
VPS13B
FBXO22
GPAM
HMGN4
HDAC8
MAST2
SRSF7
WDR62
THAP8
MYO18A
CFAP410
POLR2J3
NSA2
GFM2
OPA1
R3HCC1
CFAP20
ZNF582
WDHD1
SOCS4
ABCB8
ASCC3
CORO2B
PPM1J
MRPL21
IGHMBP2
ZBTB45
BTD
EIF3E
PSMD6
QRICH1
C2CD5
CSDE1
TMEM59
MRPS35
TM2D1
FDXACB1
C11orf1
HACL1
PGM1
RIOK1
CAGE1
INTS5
INO80C
SUGCT
MPLKIP
ACBD6
ZNF3
ZNF461
NUDT15
EIF2S1
ATP6V1D
CYB561A3
TMEM138
TNFRSF19
RNF207
MZT1
BORA
CCR7
LRRC10B
ATL1
DPY19L4
ALKBH3
SAE1
WARS2
MRPL53
LOC100421372
HSPA14
CDNF
C15orf61
TOR1AIP1
ALG10B
MTBP
MRPL13
SESN1
CEP57L1
RPTOR
UGGT1
HMGCR
GPATCH3
DRG1
PPWD1
CENPK
LCA5
CNIH3
GTF2H2
SNX17
EIF2B4
AARS2
SIRT4
ZNF331
ZDHHC6
VTI1A
UFC1
VPS52
RPS18
PDSS2
ESCO1
SPAG9
RIMBP3
RBM34
DDX18
DNAJC16
MRPL54
APBA3
NDUFA12
ZNF2
CTH
PPP1R9A
SNAP47
JMJD4
SMG5
LTA4H
CCNT1
MSL2
MMUT
CENPQ
PCNA
SUMF1
HMGCLL1
ZNF529
LTN1
NDUFC2-KCTD14
NDUFC2
MTRES1
FITM2
NUDT5
CDC123
TYW3
CRYZ
RCAN2
SPATA7
SHC3
TMBIM6
PCDH9
ZNF362
ASB13
PSMD3
SMU1
ZKSCAN2
GCLM
SETDB1
PAAF1
COA4
PSMC4
RCCD1
CDK7
METTL1
EEF1AKMT3
SULT1C4
DYNC2LI1
FAM71E1
EMC10
RNF182
UQCC1
MDM4
WDR5B
NEK2
FANCI
ZNF184
FBXL17
TMEM33
DCUN1D5
PPIL3
NIF3L1
GCFC2
ZNF839
CNTRL
RBM7
C11orf71
BCL9
C5
SYMPK
LYRM2
EIF2S3
ZBTB8B
FAM133B
MRPL3
IPO13
SLC39A6
PIKFYVE
C15orf40
ARHGAP19
ATP5MF-PTCD1
ATP5MF
WDR4
PLAC8
BBS5
DPH6
KPNA6
LMO7
KDM1A
IFTAP
FKBP7
MDP1
APC
CATSPERE
TSG101
YTHDC2
COPS7B
NDUFS3
KBTBD4
NSUN4
MRPL42
TTC14
H4C8
ETFDH
C4orf46
CUL2
COX18
KIF15
KIAA1143
NOLC1
FBXO38
IMPACT
NDUFB2
GFER
COX14
PYCR2
ARHGEF4
BCAR3
C18orf21
PPA2
SNX5
MGME1
PPP4R3B
SMAP2
MRPS16
AKR1B1
SLC25A19
DUS3L
IFNAR1
TNFRSF10D
ZNF772
TXLNG
FAM161A
RHOBTB1
DPP9
NAT10
TIGD6
HMGXB3
HIBCH
TMEM69
C2orf42
RLF
MSANTD3
CNOT2
TMEM126A
PHTF1
GDAP1
LRIG2
NUP133
ROBO3
THRAP3
TARS1
PHKG2
EXO5
PSMA1
SPATA5
NUDT6
VPS33A
GNE
ZNF23
DNAI3
HNRNPR
METTL16
DGKB
HSPE1-MOB4
HSPE1
HSPD1
TRIM59
DUS2
DDX28
KIFC1
EIF4G2
AGBL3
SH3BP2
N4BP2L2
SEC31A
CCDC77
TTC37
ARSK
BCL2L13
THAP9
TOMM40
C6orf226
C1orf53
RAB3GAP2
NELFA
ZNF432
ANO5
TERF2IP
KARS1
SCNM1
LYSMD1
HLCS
ABCD2
CMSS1
DLAT
TTC23L
NDUFAF6
VWDE
TFIP11
ZNF471
MEX3C
SRSF11
LRRC40
CEP350
MRPL27
EME1
WDR61
RAMAC
POLR1B
TTC4
PRPF18
PTPN4
FNTB
GEMIN5
DYRK4
ULK4
NEK7
PIGO
ACAT1
SRRM1
RPL24
PIBF1
DIS3
TMEM19
RSPH4A
PANK1
SORBS2
NMNAT1
LZIC
ZNF26
DYNC1I2
POT1
DDX21
DNAH7
STEAP1
CCDC146
GARS1
TRMT61B
ZNF302
ZNHIT6
AAAS
EIF3M
TPRA1
OTULIN
COQ10A
CALR3
C19orf44
GLIS2
PMS2
AIMP2
NDUFA4
ANKRD13C
ABCF2
PGD
PLCXD2
HTR3A
DNAJC11
IPPK
DNAJC21
PPP6R1
TATDN3
NSL1
AP3B1
SRSF10
ZFP14
MAGOHB
ZNF260
SNRNP70
MFSD4B
SRA1
OTUD4
LZTFL1
RPLP2
SDCCAG8
CEP170
FAF1
ATP10D
MFAP3
FAM114A2
IL1RAP
ZNF764
RBBP6
HSCB
CHEK2
H2BC18
CBWD5
NGDN
SPEF2
PMVK
CLCN3
LSM6
NFU1
MIF
ZNF112
CASP8AP2
MRPL19
STAT6
PPIL2
CRTAP
ZNF497
UTP6
DSCC1
CLGN
ST8SIA1
TXLNA
COA3
CNTD1
H4C1
H3C1
ILF2
POLR1H
ATP8A1
ATL3
EXOSC9
ATP5F1B
GCA
GTF3C6
RNF135
SUV39H2
CC2D2A
INTS12
GSTCD
SMG8
SACM1L
ERCC6L2
RSAD1
COASY
ZSCAN32
ZNF174
KLHL2
CNTLN
ACP6
SREK1IP1
CWC27
WDPCP
MDH1
HERC3
MICAL3
ZNF14
PYURF
PIGY
NT5DC1