ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220464 | HT-29
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◣ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MMP7
RILP
DUSP6
PTHLH
TTC13
CEP72
KCNJ15
MIGA1
IST1
NDUFB3
FAM126B
IL18
RAPGEFL1
NAA20
BCAR3
BSDC1
BMT2
ZNF562
RERE
PDE11A
SDCCAG8
CEP170
CBX1
KLK11
CUEDC1
ATP1A1
RNF187
RINL
GDPGP1
CIB1
FAAH
DMPK
RXRA
FMN1
PUM1
BAIAP2
KIAA1841
COL18A1
ZNF609
PIK3R1
SFT2D3
SPAAR
OTUD7A
TOLLIP
LAT2
SYT8
MEX3C
ADD3
C1QTNF9
SAMD4B
ANXA2R
RAB30
VIL1
ANK3
RABGAP1
FAM83A
RBBP9
GRPEL1
KRT8
YES1
TET3
PCNX3
WDR74
TBC1D22A
LCN2
GJC2
TMEM41A
YKT6
SLC12A7
CLK4
PSRC1
LIPA
IKZF3
MAML1
LAMA3
MEIS2
SAMD12
SLC1A5
BCAS1
CCN5
ZHX1-C8orf76
ZHX1
ACYP2
PELATON
GOLIM4
SEMA4B
SP4
SMARCD2
SH3BGRL2
ABL1
YTHDC2
ZNF28
QRICH1
PIP4P2
GOLPH3L
WDFY2
DUSP22
RABGAP1L
OSBP
MTMR6
TRIM29
CMPK2
WDR43
RAB1A
CDK4
RAVER2
ITGA3
TARS1
THAP11
VRK2
POF1B
PTGES
ZFP91
LPXN
MKNK1
EHF
ARL6
BMF
MLLT6
KEAP1
HEBP1
HEXIM1
RNF39
YPEL3
CBFA2T2
NBN
BHLHE40
PI4K2A
ORC4
MBD5
TCEAL1
ANKRD22
NOS3
ZNF226
RAD51D
SNX17
EIF2B4
SEMA3G
TMEM44
LUC7L2
FMC1-LUC7L2
FMC1
HNRNPD
OR9A4
TMTC2
CAMK2D
GDPD5
RHOG
TUBD1
RPS6KB1
SLC5A1
RAB26
ZNF44
STYK1
PPP2R3A
PAAF1
COA4
TTBK2
POLE4
ZNF233
DAB1
OMA1
HIBADH
PDLIM7
ARHGEF2
ADPRHL1
FGFBP3
ZNF292
C1orf210
RTKN2
EPS8L1
CAPN5
MAP3K14
SLC25A51
GPR39
CSF2
VWA7
RNF144A
CCDC12
PRELID3B
PHF12
SERPINA1
OGFOD1
NUDT21
ARHGEF38
ZCRB1
PPHLN1
SERBP1
PPME1
C2CD3
TES
CAPG
ECI1
UEVLD
CCDC130
PRKAR1B
NR0B2
UBE2D3
MOB2
ATP13A4
RNF13
BTBD8
ACTR2
RMND5A
RNF103-CHMP3
ZNF112
TFE3
SOD3
ID1
GRB7
GDF5
CEP250
EPS8L3
TIMM23
TMEM229A
ITGB3BP
EFCAB7
FAM13A
FARP2
LRP5
SERINC2
YARS2
SH2D3C
TSC22D4
LXN
SDCBP2
RPS7
SNRPB
SLC24A1
INTS14
P3H4
SLITRK5
MAP3K3
METTL8
DCAF17
ZC3H10
BIRC3
TMEM184A
FBXO46
GSDMD
EVPLL
PLA2G10
CHD1L
ADRM1
VAPB
TMEM216
SLC52A3
NUTF2
CENPT
ZNF91
SPACA6
NPAS4
DCP1B
GALNT12
HNRNPH1
YWHAB
GCA
TMEM179B
METAP1
TRIM3
CD47
PARG
NCAPG
NBL1
HLA-DMA
DIDO1
GID8
RGL2
ANO10
MYG1
SSBP1
EPS8
SASS6
HIF3A
KSR2
C11orf24
HGD
LSR
SLC4A2
CDK5
STX16
ANTXR2
SPATA12
TIPARP
TCERG1
LRRD1
SSR3
TTC39A
PIGW
MYO19
EPB41L5
SLCO5A1
TMEM70
ZNF337
B4GALT2
COMMD4
EHD4
PGAP2
AGBL2
RFX7
CATSPERG
TTC32
PLEKHB1
OARD1
NFYA
SNX8
JADE1
AGPAT3
SFTPD
ZNF670
NUDT7
ZNF587B
NVL
RTN4
OGA
KYAT1
LRRC8A
JMJD1C
REEP3
ZSCAN25
PCTP
WDR5B
NPAT
ATM
CMTM4
MPZL2
ZNF805
ABCC10
MYC
TAS2R4
PYROXD2
BASP1
TTC4
SLC35A3
SAE1
CCNG2
HTT
HIBCH
SORL1
RGS3
PPP1R9A
PCF11
RPS19
CMTR2
ATAD2
SLC25A28
TPM3
F5
EVPL
ARHGDIB
AKR1B10
STAU1
TTLL5
ERG28
DHDH
CASZ1
LAMB3
LDB3
KDM3A
USP53
CDYL
MCF2L
FAM227B
DTWD1
ING2
SERPINI1
PDCD10
ZFAND1
MED23
MAGOH
LNPEP
MTF2
RAC2
SGK2
CYRIB
C19orf12
UPF3A
EXOSC8
RBFOX2
GRPEL2
MTURN
RBM7
C11orf71
KRIT1
ANKIB1
PLD1
LGALS4
FEM1C
GSTA4
GMPS
MTREX
DHX29
PRKD2
SHOC2
BBIP1
RAD21
EMP1
LRRC66
C3orf14
TRMT5
SLC38A6
TMBIM6
MTHFD2L
DHRS7
RMDN1
SYS1
FAM83B
SLC4A10
DDX27
TATDN1
NDUFB9
LOXL4
OSGEPL1
DGKD
HOOK1
CCDC150
NEK4
TAF1A
TBCEL-TECTA
TBCEL
IL1RN
ZNF117
ZNF641
KBTBD2
NUCB2
HPCAL1
MFNG
TRAM2
HSD17B12
FAM110A
PHF2
DENND3
PRRC1
TMEM60
PHTF2
PYM1
ROPN1
STUM
NAP1L1
PRR15L
MRPL45
ETFBKMT
VIRMA
ZNF280D
SEC23B
PIGF
CRIPT
TFB2M
CNST
ERAP1
LAMC2
ATP6V0A4
CAPN13
TNFAIP8
HEXIM2
IKBKE
PHLDB2
CEP41
RNF145
PELI1
PRRT1B
HMGA1
ROPN1B
BCL6
F2RL1
HMGB1
USPL1
PPP1R37
NOTCH2NLC
CDC73
CCDC71L
IGSF3
PAIP2B
MET
GPER1
CYP3A5
DOCK1
INTS5
DCTN4
SLC25A13
HOXB5
ZNF552
COMMD2
TPR
ODR4
ABLIM1
SLC37A2
PTK6
FKBP7
MARK2
NCK1
CDCA7L
LRATD2
PNRC2
PYROXD1
CNPY3
NKPD1
MBNL2
PLEC
RPS14
PPP2R5B
RNF220
GULP1
BRD2
TRIM5
CAMK2G
FERMT1
SESN3
COMT
ZNF765-ZNF761
ZNF765
DEF6
NABP1
PDCD11
ATP5MD
TBX3
RNF223
FAM234A
ABCD3
E2F6
ADCK2
TTC22
DDX11
P2RY1
IDH1
CBLB
C1orf56
OLFML2B
RBBP8NL
MANF
GSTK1
CFLAR
ZNF140
NFKBIA
DERL1
SRC
ZNF527
RBIS
SENP1
PFKM
ADAM22
RAP2B
SQLE
DNAJC25-GNG10
DNAJC25
SESN1
CEP57L1
NR1H2
EDN1
ZNF652
DACH1
PDE5A
STYXL1
SAMHD1
IKBKG
SF3A3
ZNF605
FAM83D
SLC7A6
ZBTB38
MALL
SLC39A4
GTF3C5
ARID1A
UBR2
ACSL1
STRA6
MAL2
NMRAL1
HMOX2
PDE4DIP
AFF1
CDC7
FNBP4
CYB5R3
BCL9L
NUF2
PPP6R1
SLC29A2
IMPA2
LYPLA2
CSTF2
KDM2A
MRPL34
SCARB1
MPHOSPH6
CCR7
G3BP2
TCAF1
LDAH
DHRS9
DDX19B
GJC3
UTP3
MTBP
MRPL13
POLDIP3
WDR62
THAP8
NDRG1
GDF11
TPSG1
SNRPB2
KIAA1586
SPINT2
ADGRA3
MARK4
NSUN4
STPG1
NIPAL3
H4C2
TARM1
ELK1
SLC16A3
ZMYM5
MRPL17
MSL2
NCEH1
FAU
MT1X
SNRNP48
TTC7A
MCFD2
RAB27B
RNF225
MRPS31
SNIP1
TUT1
CNPPD1
MTHFR
CLCN6
COQ10A
GEMIN5
ZNF219
SLX4IP
PTPRE
LEPROT
LEPR
TMC7
CAT
TMEM59
ZNF56
PLD3
C19orf47
EDEM2
KCNAB2
COQ8A
RUSC1
GUCA2A
ZNF426
GALK2
PPP1R12A
RALA
MRS2
UBASH3B
FAM120C
PPIL3
NIF3L1
ASCC2
BPNT1
SLC2A11
RAB7A
CLP1
FANCF
FAM131A
CDK19
SRP9
AMD1
LPCAT4
CCAR1
CTDSPL2
BTF3L4
TXNDC12
FZD4
MTPN
LUZP6
TAF5
R3HCC1L
PCYT1A
NBEA
ATP23
TRIM25
MAB21L1
RPL24
KIF3A
ENKUR
MAPRE2
THG1L
CASP3
RBMS3
SEC11C
LMAN1
CCSER1
TMOD3
MCM3
B3GNTL1
INAFM2
PAIP2
METTL21A
DCBLD2
DPH6
GPBP1L1
IFI30
TNNI3
RPL27
CFAP69
DCTD
GPR89B
TTC9C
HNRNPUL2
MSANTD4
LENG8
RNPEP
ZNF780B
CDADC1
S100A4
COQ2
CD46
CD82
WDR11
RPS15
GABPA
ATP5PF
RPSA
SLC35F2
ZCCHC3
FAM20B
PPP4C
ZBTB49
LYAR
CDC14B
TESK2
THBS1
PTPN4
SPEF2
ERCC5
ABT1
TUFT1
SPRY1
ALDH3B2
CCDC33
AJM1
OTUD7B
RDH5
BRPF1
CREBZF
TEP1
CCDC14
PER3
TNK2
ZBED9
SPTSSB
GPR152
CABP4
ZMPSTE24
TUBGCP3
HBP1
GGNBP2
FBXO11
LIG3
HLA-DPA1
DOK4
ZNF518A
AMACR
FAN1
FGFRL1
BUB1B
PSMA4
IL12A
LRRN4
TTC26
RPS20
RAP2C
ASXL2
PLPP1
YIPF5
KCTD16
SPTLC2
PSMB8
RASSF9
ZNF561
ZNF26
GSN
DHPS
ZNF451
ASCC1
ANAPC16
MBD4
IFT122
ASPH
MRPS28
ATP1B1
PTPN6
CCNO
RNF19A
PPA1
NFIA
RABL3
GTF2E1
LIMK1
SLC7A7
EIF1AD
BANF1
WDR70
THAP10
LRRC49
DROSHA
C5orf22
TYW1B
LIMS1
KIF20A
BRD8
FARSB
SIPA1L2
TYMSOS
TYMS
PRRG2
NOSIP
PPP1R11
WDPCP
MDH1
NRL
DCAF11
ERCC1
PURA
COQ8B
ZNF865
SEL1L3
KIF22
ATP8A1
ANO6
SIRT2
NFKBIB
STAT3
KRR1
ATP10D
HSP90AB1
FAM98A
HIKESHI
ALDH3A2
TSC22D1
KANSL1
LSM8
SCYL2
DEPDC4
GAB2
LONRF3
SELENOT
PPA2
CYP4V2
MAPK14
TPM4
ANKRD40CL
ACTL8
ZNF138
ISG20
ABTB2
FAM111A
GM2A
TSGA10
C2orf15
STRADA
APEH
CENPN
STEAP4
SEMA4F
EDN2
NIP7
COG8
TSC22D2
FAM86B1
ZNF875
HOMER1
SPATA1
GNG5
CHMP4C
AP3S2
INTS6L
DAB2
CENPM
LAMC1
CAPS2
EIF2B5
TIMMDC1
KLHL7
FAM104B
RPS6KA6
TRAPPC2L
GALNS
RUNDC3B
MED24
CEP126
CRLS1
FAM161B
COQ6
TBCE
FZR1
RRAGC
ADAM10
ZNF697
ADGRF2
PKP2
CCDC6
PSMD1
C18orf32
GPAT3
PLSCR1
RAP2A
MYCBP2
ZNF324B
COX6A1
IGSF9
GTF2H2
GTF2H2C
NEK2
FAM8A1
PICALM
GPR37
STRAP
PC
TOR4A
TM9SF4
ARAP1
ZBTB6
RFFL
NXPE3
BTG1
SH3YL1
ACP1
COPS7B
FIS1
RHOT1
TCTEX1D4
BTBD19
ABCF2
JRKL
CCDC82
STAT2
SPRED2
PDK4
BTD
HAX1
HACL1
POLR3F
DZANK1
BARX2
HIGD2B
BBS4
PCDH1
ATP5MC2
TPK1
NEK7
ZNF614
SOS1
ARL13B
CLSTN1
ALCAM
SDHAF3
COPS2
WASHC5
NSMCE2
WDR76
FSIP1
PKP1
MST1L
KLK12
DPYD
DR1
SRI
KIFAP3
TBRG1
VPS50
HEPACAM2
ZFAND6
TP53RK
ARHGAP27
STRIP2
TNFRSF11B
COLEC10
HRCT1
MRPL53
CCDC186
PPIP5K2
GIN1
SNRPE
ING3
GNAL
TIGD6
HMGXB3
CLCN3
TSPAN12
ATP2B1
POU5F1B
VSIG10L
HSPE1-MOB4
HSPE1
HSPD1
WDR55
NUDT15
CD55