ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
EIF2D
KCNJ15
FAM227B
DTWD1
PSMD6
MTRNR2L8
PFDN4
POLR2J3
SMARCD2
B4GALT7
KMT2A
KDSR
STX16
IQSEC3
SRRM3
ZNF217
N4BP3
TPTE
FZD1
WWOX
SEC13
GBA
CHD1L
PRKAB2
ZNF341
NCOA3
SLC24A1
INTS14
DCLRE1B
AP4B1
GNAL
BCAS4
RAB37
PUS7
CTNNB1
KAT6A
AP4E1
TRIM3
SMG8
NOXA1
TBX2
DPY19L4
NSFL1C
TSEN15
GTF3C3
OAZ3
MRPL9
SLC39A13
NFAT5
ACSF3
NOTCH2NLA
MRPS23
CRBN
CALM1
PREX1
ATP1A1
ATXN7L1
HTR5A
TPM1
RINT1
GTF2IRD2B
TTLL12
POLR3B
OPA1
NOTCH2NLB
PRRC2B
ANKRD36C
USP32
CRYBG1
RBBP5
DGKZ
USP3
CUX1
ZNF76
ZNF783
NOTCH2NLC
CLUL1
ARPP19
MRPL1
ZNF398
ANGEL1
FAM207A
PEX3
ADAT2
SLC44A1
MKRN2
HOOK2
EIF3F
GNB2
C18orf25
SSBP2
FRA10AC1
USP30
RBBP8NL
NME1-NME2
NME1
DSTYK
KCNH6
PPP6R1
BRD3OS
DRAP1
C11orf68
TRIM37
MRPL40
HIRA
LRRC37A3
ZMYND8
ARHGEF1
CADPS
ARFGEF2
FUT1
NFYB
LRP12
EXOC2
TRIB1
METTL9
RMND5B
FAM133B
POLR2J
ADPGK
LTBP2
PPM1D
ARHGAP39
ZNF860
OSBPL10
DCP1A
SNRPB2
AP1G1
PDAP1
BUD31
BPTF
EPG5
ALG10B
ZCCHC4
ZNF282
APPBP2
FOXK1
MRPS31
ASNS
CPSF1
VPS37D
WWP1
PRDX2
ATR
ZNF212
C7orf26
CNOT6
MOCS1
DHRS13
SRI
RBM48
PEX1
PRELID3A
SDK1
NCAPH2
LMF2
ITPK1
TBC1D19
GFI1B
TSC1
HECTD1
SKIL
HMGB1
USPL1
MAN2C1
AGK
ARHGEF12
PARD6B
GRINA
SSBP1
TRIP4
C3orf14
CMTR2
PTPRN2
HEATR6
UTP3
ZNF609
SLC37A4
XXYLT1
ATP8B1
REXO4
PPP1CC
RGS9
NCBP3
MIS18BP1
RPS7
SF3A3
KANSL3
THEM4
TEX14
RAD51C
AMER3
USP15
DDX59
SLC27A2
ZKSCAN2
GPATCH1
OSBPL1A
ALDH5A1
LRATD2
PRELID3B
BMS1
MYL12B
USP8
LSMEM1
STX18
ADRM1
C12orf73
VPS28
TPBGL
NUF2
ATAD2
FAM3C
CTDSP2
RBL1
PPP5D1
CALM3
EPS15
TESMIN
GLIPR1L2
VWA8
POFUT1
PLAGL2
COLEC11
KDM3B
OTUD7B
ZFAND4
BCAS1
CYB561D1
IL17D
AURKAIP1
DNAJC11
UCHL5
RO60
NUDCD1
DBNDD1
GAS8
SLC33A1
RRP15
SRRT
PPM1A
ATMIN
KCTD3
SCAMP5
ANKRD40
ETFDH
C4orf46
RRP8
ILK
LYSMD2
LSS
TMOD2
RILP
NOTCH2
IMPACT
USP46
TMEM121B
UPK3BL1
DUSP6
TDP2
ACOT13
SNRPE
CDC25B
CENPB
DRG2
LRFN2
CELF6
CIB3
NOL11
HIPK1
ANKS6
CCDC59
LSM5
CLTB
NUP107
FAM102B
ASB6
AVL9
NOM1
CEBPA
FECH
DVL3
GIGYF1
SEC22B
ZNF425
VRK1
HMGN1
NPEPL1
MYO5C
CCDC130
KIAA1549
TSEN54
CASKIN2
ZC3H6
PDE8A
ATAD2B
C1orf53
NDUFAB1
GNAI2
PTPRE
SLC22A23
PDE9A
CIZ1
SYT7
DNM1
WDR11
MAP3K2
MAPKAPK5
CLCC1
ZNF746
NPAS4
BCAS3
PIAS2
KATNAL2
LOC100287896
LIPT2
GTF2F2
NUCKS1
SAMD4B
LUC7L2
FMC1-LUC7L2
INTS4
MYO5B
SCAND1
ISM1
MTF2
DNAJC25-GNG10
DNAJC25
RP9
GSAP
UBQLN4
LAMTOR2
TEX2
SCNM1
LYSMD1
AHCYL2
ADPRHL1
CBX1
BNIP1
SKIDA1
YPEL3
BSDC1
ITGB3BP
EFCAB7
ZNF562
PDE11A
RABGAP1
FEM1C
PAXBP1
DMAP1
PUM1
FAAH
NDUFS7
MED23
BAAT
CEP85
COX16
RPS29
YWHAQ
ZNF117
TMEM41A
ZNF623
TMEM242
ACYP2
RPL27
INTS12
GSTCD
FMC1
CEP72
PPIG
JMJD1C
ZMPSTE24
NDUFB3
FAM126B
RABGAP1L
MRPL44
GDPGP1
CIB1
POLE4
DCAF10
NOS3
MAPRE2
ACOX3
SELENOH
GTF2H2C_2
ZFP30
SKP2
LMBRD2
ZNF426
GTF2H2
TTC32
TRMT44
GTF2H2C
TMEM70
RPL37
TOP3B
PAFAH2
COMMD2
ZNF561
TOR1AIP1
TFPT
PRPF31
RERE
ZNF408
ARHGAP1
GSTA4
YTHDC2
PPIP5K2
GIN1
RBBP9
CLK4
CAT
IPO4
RAD54L2
FRG1
DNAJB12
SLC25A51
REEP3
RPS14
VTA1
NMBR
SFT2D3
SUPT7L
SLC4A1AP
GTF2H4
ANKRD54
LSG1
EPS8
INTS5
BCAR3
RTTN
AP3S2
STAT3
CDK5RAP1
ITGA4
TEFM
SNIP1
CAMK1D
KDM3A
INO80C
RNF187
EIF1AD
BANF1
SNAP47
TACO1
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
COPS7B
MRPL21
IGHMBP2
JMJD4
WDR74
PSMF1
ILF2
ATP5MC2
SNX17
EIF2B4
TTC26
TATDN3
NSL1
TRUB2
COQ4
TMEM222
NEMF
SAR1B
WDR36
SLC29A2
DUS1L
ZBTB45
FGFBP3
ZNF571
ZNF540
NBN
ZNF391
AKAP10
MTIF2
GALK2
MOB4
CCDC97
C17orf75
IST1
WDR43
GTPBP3
MRPS18C
HELQ
CD47
MMP7
KLHL20
ZBTB40
ZNF226
TUT1
POLR3E
DPP9
GABPB2
SMG5
COPS4
HSPE1-MOB4
HSPE1
HSPD1
KDM1A
TTI2
TMEM68
TGS1
NSA2
GFM2
OTUD7A
CCNC
DDX18
WDR55
CFAP298-TCP10L
CFAP298
ATF7IP
MRPL48
RUVBL1
SNRPB
NDUFAF1
ZSCAN25
CPPED1
RAB30
BTD
STAU1
NCOA7
MNAT1
POLG
NUP54
C8orf37
TTC4
TPR
ODR4
NR1H3
ACP2
RMND1
ARMT1
TMEM101
CCNI
GTF3C5
NDUFS3
KBTBD4
RPS20
ADPRS
MITD1
THAP11
MTBP
MRPL13
PRPF18
GMPS
COX7A2
SUGCT
MPLKIP
NOP16
HIGD2A
PSRC1
EPRS1
GRPEL2
SLTM
BRF2
FAM228B
MED18
SNRPD1
CCAR2
TIPARP
TSFM
ING2
SDHAF3
NAA20
PARP2
ALKBH3
SLC35A3
LOC102724265
SF3B6
SERPINB1
PIGW
MYO19
HNRNPD
DEFB124
PHIP
CASC3
ZSCAN31
COPS2
HUS1
EIF3E
TPK1
PSMD3
SESN1
CRKL
NECAP2
SMU1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
MRPL3
RAB18
MLEC
TGFBR2
LRP6
ALG10
EXO5
PLEKHM3
N4BP2L2
RPL26L1
CLUAP1
FAM98B
GORASP2
ZNF280D
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
INO80B
SACM1L
ZNF605
R3HCC1
CCDC88A
RBM45
ZSCAN30
PIP4P2
AARS2
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
RPL5
MRPS14
SMG7
TRMT5
SLC38A6
TSGA10
C2orf15
CLTC
STOML2
RPS15
ANXA2
HAX1
PRIM2
SNRPD3
GUCD1
PDCD6IP
KMT2D
RNF6
SEC23B
BRWD1
DPP8
SUGT1
FAM234A
BANP
DDX1
GABPA
ATP5PF
VPS13B
C18orf21
CEP85L
CASS4
PPP2R5B
ZSCAN22
SMIM13
KRR1
ACTL8
U2SURP
NMNAT1
LZIC
PUS10
PEX13
MRPL16
C10orf88
NBPF1
CEP120
ITFG2
YTHDF2
TRAM1
CDIPT
MAPK1IP1L
HLA-E
PRPSAP1
MRPL39
RNF125
ITGAL
RBM28
RPS3A
CBWD5
DHX16
ZZZ3
RCAN1
MRPS33
GSPT1
CCDC150
ERCC6L2
TARS3
TBL1X
PTPN4
CYP17A1
SLC35B1
PRMT5
ZNF165
ATG101
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
FBXO22
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
TMED1
SOD2
RALBP1
HNRNPA1L2
GPAM
SAE1
RABGGTA
STX6
CDK12
XKR7
HEXIM1
MED4
ACBD6
SET
ZNF846
STC1
ATG4C
ZNF770
TMEM65
MTMR6
FAM13A
C11orf49
SLC39A3
ATG5
CREM
TM9SF4
EIF2B3
TVP23B
ZER1
RIF1
HEATR1
PRAME
ZNF3
MRPS15
RPS26
WDR70
PHF21A
FAIM
MTOR
ATP5MC3
RPL38
P3H4
RAB5C
ATXN7L2
LIPA
LNPEP
ALG14
GARS1
RFX7
QRICH1
RESF1
INKA2
DDX20
ZNF527
PRRG2
NOSIP
COG2
GEMIN7
FABP6
DCT
PPP1R11
EEA1
TMBIM6
FOXJ3
ZMYM5
ABCG1
TMA16
RAP2C
CBWD3
MEX3C
PPIL3
NIF3L1
FAM160B1
INTS2
DISP1
CFAP20
C2CD5
NMRAL1
HMOX2
DDX46
CHMP7
TRMT61B
MMACHC
CCDC163
SREK1IP1
CWC27
NR1H2
SETD1A
YBEY
MCM3AP
MAN2A1
PPIH
METTL26
TSPAN10
NPLOC4
ANO8
HIBADH
TRDMT1
SENP1
PFKM
BAIAP2
ANKRD36
RBIS
PET117
KAT14
CCDC107
RWDD1
IPO13
DNAJC24
DCDC1
WTAP
PSMB7
NEK4
TNPO3
CSTF2T
TMEM167B
SH2B1
HNRNPH1
ZNF827
KNL1
TMBIM1
POLDIP3
ARMH3
SECISBP2L
CPLX2
ARL8B
RPL29
SLC30A6
LARS2
CCDC174
NOL12
TRAF6
RAG1
UFD1
CDC45
RGPD1
SMIM12
DDX27
AASDH
CBR1
RAD52
DHX8
MRPL42
ZC3HC1
CUL5
ZNF529
PPP6C
VRK2
WARS2
RHOT2
THG1L
MEGF8
DPYD
ZNF518A
STRADA
NARS1
KCTD5
ABLIM1
HDAC1
ABCA3
TMEM208
LRRC29
RSAD1
ISY1-RAB43
ISY1
THOC5
SELENOT
RETSAT
WDPCP
MDH1
RUNX2
DDX41
METAP1
MFSD8
ABHD18
GOSR1
COIL
TNRC6B
PHB2
PSTPIP1
FBXW7
DCP1B
GDPD5
PSMA1
PTPRCAP
ZSCAN12
LTN1
UIMC1
GOT2
MAD1L1
NDUFC2-KCTD14
NDUFC2
ZNF350
SNX16
PLK3
ZNF286A
PARK7
ADAR
TBC1D22A
TRAM2
RBSN
PRMT3
STAT6
ALDH9A1
MIER1
SIRT4
PPP1R8
ANXA2R
FUT10
CLPTM1
C19orf48
ATP5MPL
AGGF1
UBE2L3
HES3
LRRC59
METTL8
DCAF17
SFSWAP
SLC25A53
YJU2
EIF4A2
RGPD2
SNX19
PES1
CELF1
BMT2
ZNF331
SCP2
GCFC2
SEC31A
MIGA1
DAB1
TSC22D4
STXBP3
POLR1F
PPRC1
ZNF461
FKBP5
S100A4
CGGBP1
ASF1A
TMEM30A
ZNF383
LZTR1
SLC39A6
FIS1
RPL26
TMED2
TNFAIP8L1
NDUFA4
KCNH1
TBC1D13
OSGEPL1
ARL14EP
TYSND1
NUDT15
ZNF335
UBE3B
EIF1B
RCOR3
ZNF585A
SLC38A2
GFM1
CDKN2AIPNL
WDR47
TBL3
STAT1
SPATA13
UBE2D3
ZNF570
GTF2B
VAPB
HDAC2
FGD3
TMTC2
NFE2L2