ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826860 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◣ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MTRNR2L2
MTRNR2L8
SMARCD2
GBA
ITGB3BP
EFCAB7
RPS7
POLR2J3
RBBP5
TOR1AIP1
PRPSAP1
YIPF2
TIMM29
ZNF76
ATXN7L2
FRA10AC1
BRWD1
DCP1A
STX16
TMEM222
NDUFS7
MRPS23
CCDC97
TMEM101
MED23
PEX3
ADAT2
DRG2
EIF3F
SNRPD3
GUCD1
DSTYK
FAM207A
TTC4
WASHC1
PAXBP1
BANP
NUF2
NME1-NME2
NME1
YARS1
S100PBP
SSBP1
USP30
SCNM1
LYSMD1
C18orf21
SPATC1L
RTEL1
INTS12
GSTCD
NSFL1C
MAN2C1
CASC3
MRPL44
INO80C
SNAP47
JMJD4
LRP6
TTC26
IPO4
MRPL48
TATDN3
NSL1
NSA2
GFM2
LMAN2
RBL1
ZNF165
SMG8
INO80B
KAT6A
ZNF408
ARHGAP1
GTF3C3
KMT2A
SUPT7L
SLC4A1AP
METTL9
SLC39A3
ZNF335
TMEM242
TEX19
PSMF1
WDR11
RPL37
UTP3
MRPS31
RPL5
DCAF10
SEC13
LRRC59
GTF2H4
REXO4
KDM3A
TACO1
STX6
THEM4
GTF2H2
GTF2H2C
DRAP1
C11orf68
AP3S2
RUVBL1
UBE3B
EEFSEC
PEF1
BMS1
TCF3
STAT3
GTF3C5
GFI1B
TSC1
ARL8B
BNIP1
ZBTB45
CDIPT
GTF2H2C_2
AGK
B4GALT7
PSMD3
NCBP3
RFXANK
BORCS8
KDM5C
PAFAH2
CDK5RAP1
NDUFS3
KBTBD4
ITFG2
STAT1
PDE12
TXNIP
NDUFAF1
SMG7
MTF2
COX16
MRPS18C
HELQ
MRPL39
MCOLN1
UPF2
AURKAIP1
NOP16
HIGD2A
LRRC37A3
GOSR2
TSNAX
DNAJB12
MAPK1IP1L
PRRG2
NOSIP
TMEM167B
MRPL55
NLRX1
SUDS3
FRAT1
SLC24A1
INTS14
RRP15
TOMM22
FXN
TOP3B
PEMT
PDE4A
COMMD2
INTS5
HSPE1-MOB4
HSPE1
HSPD1
SLC35A3
SLC35B1
TXN2
DMAP1
NMNAT1
LZIC
ALG13
ZER1
ARHGEF1
NDUFB3
FAM126B
TBC1D19
BRF2
ALKBH3
ZSCAN22
C11orf49
GEMIN7
HDAC2
STX18
DPY19L4
CLTC
SOD2
DCT
WTAP
RNF187
MRPL3
PSMB7
CCDC59
NUP54
DDX1
RPL29
BBS1
EIF2D
ZSCAN30
DYNC2I1
SCAND1
METTL18
C1orf112
RBM17
COQ3
UCKL1
PRPF18
YTHDF2
ZBTB40
RWDD1
HEMK1
FZD1
SELENOH
RPS3A
HEXA
ZDHHC6
VTI1A
IPO13
SNX12
MRPS33
WASHC2A
AJUBA
BAZ2A
TIMM22
NKAP
NUP205
EFTUD2
CCDC103
MRPL21
IGHMBP2
TVP23B
ZNF398
ZNF425
UFSP2
SLC39A6
RTTN
CCNC
PET117
KAT14
VPS25
TSEN54
CASKIN2
NPAS4
POLG
WASHC2C
ZRANB2
CCDC86
KMT2D
PKM
TMA16
SRI
ZNF524
FIZ1
SLC44A1
ANGEL1
QTRT1
NOTCH2NLC
SF3A3
MRPL40
HIRA
RPL6
FBXO31
DHX40
ADPRS
KCNJ15
YPEL3
BSDC1
DUSP6
ZNF562
PDE11A
RABGAP1
FEM1C
CBX1
SAMD4B
LUC7L2
FMC1-LUC7L2
PUM1
ARHGAP39
FAAH
BAAT
CEP85
RPS29
CCDC130
YWHAQ
ZNF117
TMEM41A
ZNF623
TTLL12
ACYP2
RPL27
RAB37
FMC1
CEP72
PPIG
JMJD1C
ZMPSTE24
RABGAP1L
GDPGP1
CIB1
POLE4
NOS3
HMGB1
MAPRE2
ACOX3
USPL1
ZFP30
SKP2
LMBRD2
ZNF426
TRIP4
TTC32
TRMT44
TMEM70
FAM227B
DTWD1
DNAJC25-GNG10
DNAJC25
PRELID3B
SLC33A1
ATP1A1
ZNF561
POLR3B
TFPT
PRPF31
RERE
GSTA4
YTHDC2
PPIP5K2
GIN1
RBBP9
CLK4
CAT
ALG10B
RAD54L2
FRG1
SLC25A51
REEP3
RPS14
VTA1
NMBR
SFT2D3
ANKRD54
LSG1
EPS8
BCAR3
HTR5A
ITGA4
TEFM
SNIP1
PPP6R1
CAMK1D
EIF1AD
BANF1
ORC4
MBD5
ZNF829
ZNF568
TMEM43
CHCHD4
TDP2
ACOT13
COPS7B
C3orf14
WDR74
KANSL3
ILF2
ATP5MC2
SNX17
EIF2B4
TRUB2
COQ4
RILP
NEMF
SAR1B
WDR36
SLC29A2
DUS1L
FAM133B
FGFBP3
ATR
ZNF571
ZNF540
NBN
ZNF391
TSEN15
AKAP10
MTIF2
GALK2
MOB4
MRPL1
C17orf75
IST1
WDR43
GTPBP3
CD47
MMP7
KLHL20
ZNF226
TUT1
POLR3E
DPP9
GABPB2
SMG5
COPS4
KDM1A
TTI2
TMEM68
TGS1
OTUD7A
DDX18
WDR55
CFAP298-TCP10L
CFAP298
ATF7IP
CTNNB1
KIAA1549
SNRPB
ZSCAN25
CPPED1
RAB30
BTD
STAU1
NCOA7
MNAT1
C8orf37
TPR
ODR4
NR1H3
ACP2
ZCCHC4
RMND1
ARMT1
CCNI
RPS20
MITD1
THAP11
MTBP
MRPL13
CHD1L
GMPS
COX7A2
SUGCT
MPLKIP
PSRC1
EPRS1
GRPEL2
TPM1
SLTM
FAM228B
MED18
SNRPD1
CCAR2
ZNF609
TIPARP
DCLRE1B
AP4B1
TSFM
ING2
SDHAF3
NAA20
PARP2
LOC102724265
SF3B6
SERPINB1
PIGW
MYO19
SLC39A13
HNRNPD
ADRM1
DEFB124
PHIP
ZSCAN31
COPS2
HUS1
EIF3E
TPK1
SESN1
CRKL
NECAP2
SMU1
OPA1
CDC73
TRMT2A
RANBP1
ZNF292
VIRMA
SNRPB2
RAB18
MLEC
TGFBR2
ALG10
EXO5
PLEKHM3
N4BP2L2
RPL26L1
CLUAP1
FAM98B
GORASP2
ZNF280D
TTC13
TTLL1
CALCRL
MTR
CENPV
TIGD1
EIF4E2
MAGOH
SACM1L
ZNF605
R3HCC1
CCDC88A
RBM45
PIP4P2
SEC22B
AARS2
SNRPE
COA6
CEP57L1
CDK19
PIH1D2
NKAPD1
ANKRD40
MRPS14
TRMT5
SLC38A6
TSGA10
C2orf15
STOML2
RPS15
ANXA2
HAX1
PRIM2
LSM5
CLTB
PDCD6IP
RNF6
SEC23B
PSMD6
DPP8
SUGT1
FAM234A
GABPA
ATP5PF
VPS13B
CEP85L
CASS4
PPP2R5B
SMIM13
KRR1
ACTL8
U2SURP
PUS10
PEX13
MRPL16
C10orf88
NBPF1
CEP120
PRKAB2
TRAM1
HLA-E
RNF125
NOXA1
ITGAL
NFAT5
RBM28
CBWD5
DHX16
ZZZ3
SRRM3
RCAN1
NOTCH2NLA
GSPT1
CCDC150
ERCC6L2
TARS3
TBL1X
PTPN4
CYP17A1
WWOX
PRMT5
NUP107
GLIPR1L2
ATG101
AAR2
RRN3
TMEM259
SRP9
MRPL19
SDCCAG8
CEP170
FBXO22
LTA4H
WDFY1
PCBP2
NSUN4
AMD1
NDFIP1
RPS19
DHTKD1
MEMO1
TMED1
RALBP1
GNB2
HNRNPA1L2
DGKZ
GPAM
DNAJC11
SAE1
RABGGTA
CDK12
CYB561D1
XKR7
HEXIM1
MED4
ACBD6
SET
ZNF846
STC1
ATG4C
ZNF770
TMEM65
MTMR6
FAM13A
ATG5
CREM
TM9SF4
EIF2B3
RIF1
HEATR1
PRAME
ZNF3
MRPS15
RPS26
WDR70
PHF21A
FAIM
MTOR
ATP5MC3
RPL38
INTS4
P3H4
RAB5C
CIZ1
LIPA
CRBN
IQSEC3
LNPEP
ALG14
GARS1
RFX7
QRICH1
RESF1
INKA2
DDX20
ZNF527
COG2
FABP6
PPP1R11
EEA1
TMBIM6
FOXJ3
ATAD2
ZMYM5
ABCG1
RAP2C
CBWD3
MEX3C
PPIL3
NIF3L1
FAM160B1
INTS2
DISP1
CFAP20
C2CD5
NMRAL1
HMOX2
DDX46
CHMP7
TRMT61B
MMACHC
CCDC163
SREK1IP1
CWC27
NR1H2
SETD1A
YBEY
MCM3AP
MAN2A1
PPIH
METTL26
TSPAN10
NPLOC4
ANO8
HIBADH
TRDMT1
SENP1
PFKM
BAIAP2
ANKRD36
VWA8
RBIS
CCDC107
DNAJC24
DCDC1
NEK4
KDM3B
TNPO3
CSTF2T
SH2B1
HNRNPH1
ZNF827
KNL1
TMBIM1
POLDIP3
ARMH3
SECISBP2L
CPLX2
ZNF783
SLC30A6
LARS2
CCDC174
C12orf73
NOL12
TRAF6
RAG1
UFD1
CDC45
RGPD1
SMIM12
DDX27
AASDH
ASNS
CBR1
RAD52
DHX8
MRPL42
ZC3HC1
CUL5
ZNF529
PPP6C
VRK2
WARS2
RHOT2
THG1L
MEGF8
DPYD
ZNF518A
STRADA
NARS1
KCTD5
ABLIM1
HDAC1
ABCA3
TMEM208
LRRC29
RSAD1
ZNF341
ISY1-RAB43
ISY1
THOC5
SELENOT
RETSAT
NOTCH2NLB
WDPCP
MDH1
RUNX2
CLUL1
DDX41
METAP1
MFSD8
ABHD18
GOSR1
COIL
TNRC6B
PHB2
UCHL5
RO60
NOL11
PSTPIP1
FBXW7
DCP1B
GDPD5
PSMA1
DHRS13
PTPRCAP
ZSCAN12
LTN1
UIMC1
GOT2
MAD1L1
NDUFC2-KCTD14
NDUFC2
ZNF350
SNX16
PLK3
ZNF286A
PARK7
MKRN2
ADAR
TBC1D22A
TRAM2
RBSN
PRMT3
STAT6
ALDH9A1
MIER1
SIRT4
PPP1R8
ZNF212
ANXA2R
FUT10
CLPTM1
C19orf48
ATP5MPL
AGGF1
NDUFAB1
UBE2L3
HES3
METTL8
DCAF17
SFSWAP
SLC25A53
YJU2
EIF4A2
RGPD2
SNX19
PES1
CELF1
BMT2
ZNF331
ZC3H6
SCP2
GCFC2
SEC31A
MIGA1
DAB1
TSC22D4
STXBP3
ZKSCAN2
POLR1F
PPRC1
ZNF461
FKBP5
S100A4
CGGBP1
ASF1A
NOTCH2
CALM1
TMEM30A
ZNF383
LZTR1
PRRC2B
FIS1
RPL26
TMED2
TNFAIP8L1
EXOC2
NDUFA4
KCNH1
TBC1D13
OSGEPL1
ARL14EP
TYSND1
NUDT15
EIF1B
RCOR3
ZNF585A
SLC38A2
GFM1
CDKN2AIPNL
WDR47
TBL3
SPATA13
UBE2D3
ZNF570
GTF2B
VAPB
FGD3
HECTD1
TMTC2
NFE2L2
FNTB
CCNG2
AP1G1
SPHK2
RPL18
CCNL1
AHCYL1
SERBP1
EIF5A2
ZNF302
ZZEF1
SIRT6
CYB5D2
ANKRD24
VPS13D
RPL22
CRLF3
MRPL38
RAB11A
SYPL1
WDR24
NDUFA6
ING3
CALM2
PSMD11
MRPL45
ZNF25
SASS6
APEH
BRIX1
ZNF569
THOC3
NUP214
CLASP2
ZNF510
ADNP
GTPBP10
UBOX5
FASTKD5
TADA1
ZBTB20
TTC14
HIF1AN
TBPL1
UGCG
PIK3R1
ZW10
YAP1
MGST3
PDCD2
NUTF2
CENPT
SCYL3
CEP41
PSMG1
PPA2
LIG4
H4C8
SRFBP1
FAM25E
PIKFYVE
PDE8A
VAMP4
RPS12
HARS2
HARS1
OGT
RPA2
EDC4
ZNF839
APRT
ZNF44
SRSF11
MAML1
MRPL58
TRNAU1AP
EIF2S1
ATP6V1D
POLR3A
KLHDC10
ST6GAL1
TMEM128
ZNF28
CYP4V2
VPS72
KANSL1
ZNHIT6
MKNK1
GOLGA3
YWHAB
INO80D
RINT1
C7orf26
RHOT1
RABEP1
CYREN
USO1
CSDE1
TTC21B
COMMD1
TINF2
TRMO
SNX5
MGME1
RPS13
YARS2
GDAP1
USP3
TMEM116
ERP29
EFHD1
GNAL
OTUD7B
LANCL2