ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPSC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◣ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

CBX1
POU5F1
JMJD1C
REEP3
KLF14
TMEM216
SOX2
LUC7L2
FMC1-LUC7L2
ELOVL2
POU5F1B
CCDC130
C3orf14
RAB37
DHX40
TMEM43
CHCHD4
KCNJ15
RPL26L1
SIVA1
FANK1
GAGE2C
GAGE2B
GAGE2A
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
ENOSF1
PAQR9
NBPF1
FAM227B
DTWD1
RNF187
ANK1
SPDYA
USP30
RTTN
SERPINB1
ZFP30
BRWD1
PEX3
ADAT2
SPATC1L
TTLL12
HMGB1
USPL1
CD47
TRAF6
RAG1
DHRS7
SOX30
C5orf52
SAMD4B
TRDMT1
SLC11A2
POTEH
AVPR1A
ZKSCAN2
DCP1A
SLC39A6
POLR2J3
SDCBP
ANO5
ANKRD18B
ANKRD54
XKR6
EIF2S2
ZCCHC7
GMDS
GEMIN5
NEIL3
HUS1
TMX4
CLGN
GAGE12F
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
NUF2
TMEM242
RAD54L2
NEK7
SLC10A7
BTBD10
KAT6B
RPAP2
GLMN
RIPPLY3
TMEM41A
CAT
CT45A10
DNM3
STX16
SLC44A1
MTRNR2L8
MRPL40
HIRA
NEMF
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
KBTBD7
C3orf80
ZIK1
RNF38
CNTLN
ZNF562
ZMYM5
PPP2R2B
NUP54
PLCL2
HECTD1
EIF5A2
TASOR
CTNNB1
RFK
CRH
PRPF40A
ARL6IP6
NLGN4X
NSFL1C
PGBD2
ELF1
WBP4
C1orf53
BTG1
PRELID3B
ILRUN
PSMG1
PARP16
KLHL7
GPR150
YPEL3
YBEY
MCM3AP
AGBL3
USP35
KCTD21
SULT1B1
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZC3H12C
MRPS31
SNRPB
CLTC
TARS3
AP1AR
YTHDF3
TMEM229A
FKBP9
OPRK1
LRP6
MARCHF7
FIGNL1
HSPA2
ACBD6
ADAM22
RIMS2
ZNF623
HLCS
KCTD3
WNT2B
AP3S2
KANSL1
ATL3
GAGE12G
GAGE12D
GAGE12E
GAGE12C
CLK4
RNF130
EPS8
CNTRL
C5
PPP1R9A
INPP5F
SLC25A53
GDAP1
PEX2
ZSWIM5
TNFRSF11B
COLEC10
GLRB
AKR1E2
C18orf21
CCDC50
UTS2B
KCNN2
ZNF280D
TRMT5
SLC38A6
SELENOT
RANBP2
ARHGEF12
LRRC8C
RPS29
MRPL48
FAM98B
ZNF518A
KBTBD3
AASDHPPT
CLOCK
CARS2
SVOPL
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
PPP2CA
ATG10
HACD3
POLE4
ALKBH3
MED4
DR1
SMAD5
RMDN2
VPS37A
CNOT7
ALG1
BOLA1
TMA16
BCKDHB
FBXO34
SLC39A8
PARP4
C15orf61
CERS6
REXO4
NOTCH2NLC
CCNI
P4HA1
MTHFS
DDX60L
PRKD3
SNIP1
CDYL
CTSC
C12orf73
P2RY1
NAPG
SPATA7
EPM2A
TMOD3
GADD45A
NOL12
ZNF25
BTG3
RAD23B
XKR4
ADIPOR1
HPS3
NELFCD
SORCS1
STBD1
INTS12
GSTCD
ZNF391
RNF6
RNF125
CALM2
THOC3
ZNF791
ZNF490
ELOVL1
TAS2R4
ZC3H15
ACAT1
SSH2
PIK3CA
MRPS5
WASHC1
SNRNP48
MFSD14A
SMARCAL1
RRAS2
CTXN2
OTOP1
MYEF2
SGIP1
UBE2D3
EEF1AKMT2
RSRC1
EIF4G2
SAMD13
DEPDC1
CPD
MTIF2
CPPED1
CLN5
PXK
TYW1B
TTLL7
STK17A
PCDHGC3
GPD2
ENAH
COMMD2
NFE2L2
ARNT
PPP1R12A
ACP6
E2F7
RUVBL1
MRPL42
EEFSEC
PIK3R1
RPS6
PHF3
HERC4
ORC2
SRSF12
STAG3
GPC2
DPY19L4
WDR74
WDFY1
NDUFA6
TIGD6
HMGXB3
ZSCAN32
ZNF174
CRTAP
ANGEL2
MBD4
IFT122
SH3RF2
ZNF518B
SF3A3
SMIM12
VAMP4
PCM1
SMAP1
L3HYPDH
JKAMP
DTD2
FOCAD
GPR155
STX17
TRIM27
HECW2
ZNF829
ZNF568
SLC35A3
MAPK1IP1L
ARL4A
MDM4
LIMS1
SS18
ARFGEF1
TACSTD2
ZSCAN25
ZNF341
ZC3H6
EIF3D
MTLN
ZNF24
HACE1
CCDC71L
CDC42SE2
HADH
CRHBP
COPS8
PTGES2
DKK1
ZNF544
C4orf36
GNAI1
HSPA1B
MED23
GTF2H2C_2
GTF2H2
NSA2
GFM2
PDCD6IP
HDAC1
ADAR
UBQLN1
TOMM20L
TYW3
CRYZ
JRKL
CCDC82
RBM15B
FH
SVIP
MPP5
COG6
HEATR5B
GPATCH11
CHST14
LRRC7
TJP2
SLC25A27
CYP39A1
RHEX
BSDC1
TTC32
YTHDC2
RBBP9
TATDN3
NSL1
SLC25A28
SEC61A2
CEP78
LIN7C
HDAC9
LGALSL
RIOX1
GTF3C3
RPS3A
SENP1
PFKM
ANKRD36
RNASEH2C
NAP1L1
PDK1
DEPTOR
MRPL17
COX18
CRNKL1
CFAP61
NEK9
ZNF354C
SLC16A1
SMIM10L1
PRH1-TAS2R14
RPN2
TBC1D31
MROH8
TRERF1
ZFP2
NT5E
SETD5
HSPA1L
HSPA1A
AGK
COG2
SPRYD7
NOL7
AKAP9
ZNF454
DRG2
HTR5A
DUS1L
GOT2
GNAL
SLC35B4
SYT1
FBXL5
ZSCAN5A
PAG1
ZNF485
KANSL3
NOTCH2NLA
MTMR9
G3BP2
PRDX6
DDX25
FN1
PPP1R8
PPP5D1
CALM3
MPHOSPH10
MCEE
HECTD2
AATF
MAGEF1
MYNN
RNF138
PTPDC1
POLR3D
FNBP1L
PGAP4
ADGRG6
ARHGAP39
RAD52
SLC45A4
HERC3
ELF2
PYURF
PIGY
PCNA
ELAPOR2
ABHD5
LRRC75A
ITM2B
DUX4
TMEM185B
PTGER3
ATR
DPP8
PSMA1
PPIL1
EGLN1
DNAH7
BTBD1
BTF3
NCAM1
RNF32
PDE3B
SYT16
NID2
FRA10AC1
MRPL44
KMT2A
KLHL20
MTBP
MRPL13
AASDH
DCP1B
POLR1F
SRSF11
PKD2L2
TMEM106B
THUMPD1
LRRD1
GGA1
CC2D2B
RHBDD1
CCDC138
NTSR2
ATP5F1E
CTHRC1
CFAP206
DPF2
EXOC6B
EDNRB
CLVS2
GRIA4
HMGCLL1
UGT8
NRG3
FAM114A1
CXCL6
TRPA1
B4GALT7
MEMO1
FAM160B1
RPL6
ZNF670
CYP51A1
UBE2Q1
PTPN11
GABPB1
IMPACT
FAM161B
COQ6
SEC24B
SMC3
GTF2E2
CBR3
TTC12
CCDC59
CCDC88A
RPL5
ANKRD36C
SLC25A32
DCAF13
BTRC
ANTXR2
RAB3IP
SYS1
TMEM267
ZFYVE9
GMFB
SLC36A1
MRPS30
SLC38A1
STXBP5L
STRN3
AP4S1
P3H1
DIPK2A
B3GALNT1
ADRB1
ZNF32
GAGE12H
TRAM2
SEC31A
EXOC2
ZBTB6
NOC3L
THAP9
SLC35F5
AMZ2
ZNF594
BBS5
RALGAPA1
MINDY2
FAM185A
NUP58
ISCA1
MRS2
DNAH14
EIF3A
ERV3-1-ZNF117
ERV3-1
SLC46A3
PLPPR5
CAVIN3
ELP1
ABITRAM
SLC26A4
AGPS
WASHC4
FANCF
CCDC112
EIF2D
MAN2C1
ABCA3
CGGBP1
ZFP91
LUC7L3
SLAIN2
ZNF654
SUCLG2
MED17
ZNF229
OR10AC1
HORMAD2
SLC24A1
INTS14
BMS1
METTL9
DDX1
TMEM65
HDAC2
ATP6V0D1
PPP1R12B
FER
CCPG1
C15orf65
STAMBPL1
C3orf33
USP47
GPR37
AGL
KBTBD6
MGA
PXYLP1
ALMS1
PTPN1
ARHGAP31
CHSY3
NSMAF
RPP25
ENOX1
TCF25
SEMA6D
SVEP1
ARPP21
MB21D2
PDE11A
TGFBR2
MTR
TVP23B
CFAP20
TATDN1
NDUFB9
PDGFD
TOE1
MUTYH
ZC3H14
TP53BP2
ICE2
ERMP1
MINPP1
PPP2R5A
CAPN7
INSIG1
PTBP3
TRIM44
ARFGAP3
PTDSS1
MTERF3
KLF11
HSPE1-MOB4
HSPE1
HSPD1
KCNH1
WDR47
GPR180
PLPP1
CCDC126
PEX7
EFCAB13
JAK2
ZNF655
UGP2
GUCY1A2
LY75-CD302
LY75
SELENOH
NMRAL1
HMOX2
ADNP
NLE1
SPECC1
CYP2R1
NXPE3
NFYC
MRGPRX3
PLD1
SIGMAR1
MTARC2
FZD6
CCDC149
MOXD1
PAXBP1
TSEN15
SDHAF3
TTC14
DYNLRB2
ZCWPW2
AZI2
ERI1
CNIH1
TFAM
TTC37
ARSK
FAN1
EPHA3
PROS1
ALG9
MANF
NKIRAS1
PRKACB
IFNAR1
RICTOR
FAM174A
C2orf69
KTI12
EIF3B
MTMR2
CTBS
CHMP2B
NR1D2
KDR
PIFO
SNCA
FANCA
PLSCR1
NASP
SNX9
LRRCC1
PCLO
TBC1D7-LOC100130357
TBC1D7
PRDM5
ATP7B
ALG11
DEPDC7
DNER
QRFPR
SOWAHC
FAM237B
B3GALT1
FBLL1
CGAS
TRPC3
DNAJC25-GNG10
DNAJC25
KMT2D
MRPL58
PDE4D
PSMD14
STARD4
NCAPG
HSD17B12
RMI1
HNRNPK
TMEM30B
KIFBP
CDC27
HSPA5
C11orf97
CFAP91
TRIP4
TRAM1
MRPL39
INTS2
INO80D
DIDO1
SPNS1
GID8
ZNF621
POMZP3
GHITM
PPT1
MYBL1
TMEM251
MOAP1
ZNF443
SAMD3
ITGB8
PHLPP1
MOV10
TMEM200A
GRB14
WDR11
TPR
ODR4
APRT
PKM
FBXO7
GPC6
PLK4
RDH14
GINM1
PHF10
SCYL2
DEPDC4
MDFIC
HDDC2
NTAN1
DIRAS2
TPBG
LIFR
NEFL
ST6GAL2
PPIG
TOR1AIP1
FAM133B
NEK4
UBOX5
FASTKD5
POC1B-GALNT4
RMDN1
GAPVD1
CEBPB
PGGT1B
HNRNPF
ZNF354B
UBA5
ACAD11
PRICKLE1
CPNE3
RRS1
APP
TRIM36
RPL37
OTUD7A
RINT1
CLPB
FUT8
STEAP1B
ACSL1
SLC25A40
DBF4
POLR2M
SEMA6A
HDHD5
BAG2
LCMT2
ADAL
FNDC3A
MOB3B
FBXL20
PPIC
GALNT3
CNRIP1
SEC31B
SNX21
NBN
TTI2
MAGOH
ASNS
STAT1
SMIM8
USP53
BORCS5
RPS4X
DDX59
SLC35A1
SRD5A3
GAREM1
THSD7A
FZD9
IFRD1
TBC1D9
CPE
PPP3CA
PCMTD2
TAB2
HYLS1
ZNF800
EPSTI1
RAD51
ERICH6
LACC1
CCDC122
LSM5
OTUD7B
PCYOX1
DROSHA
C5orf22
MTHFD2
PMS1
ORMDL1
SLC25A38
ASCC3
ATL1
NDUFA10
AVL9
ANKRD18A
H2BC18
SHLD2
GLUD1
ZNF860
OSBPL10
RHOB
TRPC4
FBXO22
MAPK14
TSEN54
CASKIN2
FAM200B
SFT2D2
MAD2L1
ZNF473
VRK3
ZFPM2
TESMIN
KLHDC1
ZNF287
CD302
PCOLCE2
SPAG6
RBM28
CBR1
TBC1D13
PIGBOS1
PIGB
TRIM59
TTLL4
MAP3K2
PSTK
DLC1
ETNK1
KBTBD8
SPATA18
PHKB
ITFG1
INO80
FAM47E
TMEM254
KAT2B
RPAP3
RTKN2
TBC1D30
ZDHHC21
SND1
NREP
FAM47E-STBD1
PFN2
TGFBRAP1
GNS
MEGF10
TMEM217
TBC1D22B
RGS7
RIMKLA
HDGFL1
NPBWR1
ZBTB45
HNRNPD
CDC73
UGGT1
HAUS4
ATAD5
ARL6IP1
IQCH
AAGAB
CAAP1
NPL
RNF126
HERC5
E2F6
MACIR
SREK1
AVPI1
ZNF607
ZNF624
ZNF367
DPYSL3
UBE2V2
CNTNAP3B
FHIT
CYFIP2